RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 BABAM1Q9NWV8 329 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 SLC4A4Q9Y6R1 1079 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 UBASH3AP57075 661 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 IFIT1BQ5T764 474 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 RAB11FIP4Q86YS3 637 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 PANK2Q9BZ23 570 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 IDEP14735 1019 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 GNAT2P19087 354 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 CYP7A1P22680 504 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 EXOC1Q9NV70 894 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 TNNQ9UQP3 1299 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 RNF113AO15541 343 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 XRCC6P12956 609 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 CLCN1P35523 988 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 INCENPQ9NQS7 918 aa15.14■□□□□ 0.01
SMARCA4-205ENST00000450717 YTHDC2Q9H6S0 1430 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 N4BP3O15049 544 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 PLCD4Q9BRC7 762 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 CABP5Q9NP86 173 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 GCOM1H8Y6P7 765 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 MYZAPP0CAP1 466 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 IFFO1Q0D2I5 559 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 TRIM47Q96LD4 638 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 DACT1Q9NYF0 836 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 CALM1P0DP23 149 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 CALM2P0DP24 149 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 CALM3P0DP25 149 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 CHMLP26374 656 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 DNM1Q05193 864 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 SLC39A6Q13433 755 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 DYDC1Q8WWB3 177 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 TAOK3Q9H2K8 898 aa15.13■□□□□ 0.01
SMARCA4-205ENST00000450717 PRC1O43663 620 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 BMS1Q14692 1282 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 HS1BP3Q53T59 392 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 CREB3L3Q68CJ9 461 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 NGLY1Q96IV0 654 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 RTL9Q8NET4 1388 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 AK2P54819 239 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 TRAF1Q13077 416 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 USP26Q9BXU7 913 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 LRRC2Q9BYS8 371 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 GNG11P61952 73 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 ST5P78524 1137 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 IFI16Q16666 785 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 RRAGBQ5VZM2 374 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 NBPF6Q5VWK0 638 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 ISM2Q6H9L7 571 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 RUFY3Q7L099 469 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 NBPF5PQ86XG9 351 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 NBPF4Q96M43 638 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 FAM107BQ9H098 131 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 NOLC1Q14978 699 aaKnown RBP eCLIP15.12■□□□□ 0.017e-6■□□□□ 9
SMARCA4-205ENST00000450717 ERMNQ8TAM6 284 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-205ENST00000450717 ZBTB7BO15156 539 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 TSPY3P0CV98 308 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 TSPY8P0CW00 308 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 MICALCLQ6ZW33 695 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 PHACTR3Q96KR7 559 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 RFC4P35249 363 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 SMARCC1Q92922 1105 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 TCEANC2Q96MN5 208 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 STAT6P42226 847 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 EYA1Q99502 592 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 MAP2K1Q02750 393 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 CKAP4Q07065 602 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 ATL3Q6DD88 541 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 CALCOCO1Q9P1Z2 691 aa15.11■□□□□ 0.01
SMARCA4-205ENST00000450717 SPTLC2O15270 562 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 SKILP12757 684 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 CCDC172P0C7W6 258 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 GTPBP4Q9BZE4 634 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 TMX1Q9H3N1 280 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 ZKSCAN5Q9Y2L8 839 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 AOX1Q06278 1338 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 TCERG1LQ5VWI1 586 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 NAA16Q6N069 864 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 BRAPQ7Z569 592 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 DCAF5Q96JK2 942 aa15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 UTP14AQ9BVJ6 771 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 CYLC1P35663 651 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 EDC4Q6P2E9 1401 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-205ENST00000450717 PPFIA3O75145 1194 aa15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 DHX32Q7L7V1 743 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 HOXC9P31274 260 aa15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 CCDC186Q7Z3E2 898 aa15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 TBCAO75347 108 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 TYRO3Q06418 890 aa15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 AOPEPQ8N6M6 819 aa15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 DNAJC25Q9H1X3 360 aa15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 GOPCQ9HD26 462 aa15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 GSTTP1A0A1W2PQM5 241 aa15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 RNMTO43148 476 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-205ENST00000450717 IP6K1Q92551 441 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms