RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 PRKAR2BP31323 418 aa10.58□□□□□ -0.72
NPHP1-208ENST00000449600 LMOD3Q0VAK6 560 aa10.58□□□□□ -0.72
NPHP1-208ENST00000449600 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
NPHP1-208ENST00000449600 EIF4A2Q14240 407 aaKnown RBP10.58□□□□□ -0.72
NPHP1-208ENST00000449600 NEUROD2Q15784 382 aa10.58□□□□□ -0.72
NPHP1-208ENST00000449600 HSP90AB2PQ58FF8 381 aa10.58□□□□□ -0.72
NPHP1-208ENST00000449600 BRICD5Q6PL45 260 aa10.58□□□□□ -0.72
NPHP1-208ENST00000449600 LINC00116Q8NCU8 138 aa10.58□□□□□ -0.72
NPHP1-208ENST00000449600 IP6K1Q92551 441 aa10.58□□□□□ -0.72
NPHP1-208ENST00000449600 MEGF6O75095 1541 aa10.58□□□□□ -0.72
NPHP1-208ENST00000449600 GNPATO15228 680 aa10.57□□□□□ -0.72
NPHP1-208ENST00000449600 WFS1O76024 890 aa10.57□□□□□ -0.72
NPHP1-208ENST00000449600 HMOX1P09601 288 aa10.57□□□□□ -0.72
NPHP1-208ENST00000449600 GCGRP47871 477 aa10.57□□□□□ -0.72
NPHP1-208ENST00000449600 CALD1Q05682 793 aaKnown RBP10.57□□□□□ -0.72
NPHP1-208ENST00000449600 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
NPHP1-208ENST00000449600 NLRP7Q8WX94 980 aa10.57□□□□□ -0.72
NPHP1-208ENST00000449600 LTV1Q96GA3 475 aaPredicted RBP10.57□□□□□ -0.72
NPHP1-208ENST00000449600 MCOLN1Q9GZU1 580 aa10.57□□□□□ -0.72
NPHP1-208ENST00000449600 THSD7BQ9C0I4 1608 aa10.57□□□□□ -0.72
NPHP1-208ENST00000449600 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
NPHP1-208ENST00000449600 MSS51Q4VC12 460 aa10.56□□□□□ -0.72
NPHP1-208ENST00000449600 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
NPHP1-208ENST00000449600 WDR33Q9C0J8 1336 aaKnown RBP10.56□□□□□ -0.72
NPHP1-208ENST00000449600 LTN1O94822 1766 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 LOC102724428A0A0B4J2F2 783 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 TESPA1A2RU30 521 aaPredicted RBP10.55□□□□□ -0.72
NPHP1-208ENST00000449600 E9PSI1 815 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 GYS1P13807 737 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 SIK1P57059 783 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 RASSF7Q02833 373 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 CCDC27Q2M243 656 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 DEFB115Q30KQ5 88 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 LCE2CQ5TA81 110 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 MPRIPQ6WCQ1 1025 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 PHOX2BQ99453 314 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
NPHP1-208ENST00000449600 WIPF1O43516 503 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 TMPOP42166 694 aaKnown RBP10.54□□□□□ -0.72
NPHP1-208ENST00000449600 RIPK4P57078 832 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 NFE2L2Q16236 605 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 LDHDQ86WU2 507 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 WDR63Q8IWG1 891 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 GCC1Q96CN9 775 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 PLEKHF1Q96S99 279 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 MYH16Q9H6N6 1097 aa10.54□□□□□ -0.72
NPHP1-208ENST00000449600 RRP7AQ9Y3A4 280 aaKnown RBP10.54□□□□□ -0.72
NPHP1-208ENST00000449600 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
NPHP1-208ENST00000449600 WNT7AO00755 349 aa10.53□□□□□ -0.72
NPHP1-208ENST00000449600 SMPD1P17405 629 aa10.53□□□□□ -0.72
NPHP1-208ENST00000449600 ITPK1Q13572 414 aa10.53□□□□□ -0.72
NPHP1-208ENST00000449600 TRAPPC3LQ5T215 181 aa10.53□□□□□ -0.72
NPHP1-208ENST00000449600 WWC1Q8IX03 1113 aa10.53□□□□□ -0.72
NPHP1-208ENST00000449600 CHRNA5P30532 468 aa10.52□□□□□ -0.73
NPHP1-208ENST00000449600 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.73
NPHP1-208ENST00000449600 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
NPHP1-208ENST00000449600 BEGAINQ9BUH8 593 aa10.52□□□□□ -0.73
NPHP1-208ENST00000449600 NFKBIEO00221 500 aa10.51□□□□□ -0.73
NPHP1-208ENST00000449600 PIGBQ92521 554 aa10.51□□□□□ -0.73
NPHP1-208ENST00000449600 RTCBQ9Y3I0 505 aaKnown RBP10.51□□□□□ -0.73
NPHP1-208ENST00000449600 PCDH11XQ9BZA7 1347 aa10.51□□□□□ -0.73
NPHP1-208ENST00000449600 PCDH11YQ9BZA8 1340 aa10.51□□□□□ -0.73
NPHP1-208ENST00000449600 TTC24A2A3L6 582 aaPredicted RBP10.5□□□□□ -0.73
NPHP1-208ENST00000449600 CA12O43570 354 aa10.5□□□□□ -0.73
NPHP1-208ENST00000449600 SLFN5Q08AF3 891 aa10.5□□□□□ -0.73
NPHP1-208ENST00000449600 SULF1Q8IWU6 871 aa10.5□□□□□ -0.73
NPHP1-208ENST00000449600 IL16Q14005 1332 aa10.5□□□□□ -0.73
NPHP1-208ENST00000449600 LTBP1Q14766 1721 aa10.5□□□□□ -0.73
NPHP1-208ENST00000449600 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
NPHP1-208ENST00000449600 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
NPHP1-208ENST00000449600 TRIM32Q13049 653 aa10.49□□□□□ -0.73
NPHP1-208ENST00000449600 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
NPHP1-208ENST00000449600 RC3H1Q5TC82 1133 aaKnown RBP10.49□□□□□ -0.73
NPHP1-208ENST00000449600 AEBP1Q8IUX7 1158 aa10.49□□□□□ -0.73
NPHP1-208ENST00000449600 SNIP1Q8TAD8 396 aaKnown RBP10.49□□□□□ -0.73
NPHP1-208ENST00000449600 RAPGEF4Q8WZA2 1011 aa10.49□□□□□ -0.73
NPHP1-208ENST00000449600 ATP13A2Q9NQ11 1180 aa10.49□□□□□ -0.73
NPHP1-208ENST00000449600 RCAN3Q9UKA8 241 aa10.49□□□□□ -0.73
NPHP1-208ENST00000449600 SUPT16HQ9Y5B9 1047 aaKnown RBP10.49□□□□□ -0.73
NPHP1-208ENST00000449600 GTF3C3Q9Y5Q9 886 aa10.49□□□□□ -0.73
NPHP1-208ENST00000449600 ZNF521Q96K83 1311 aa10.49□□□□□ -0.73
NPHP1-208ENST00000449600 CYP27B1O15528 508 aa10.48□□□□□ -0.73
NPHP1-208ENST00000449600 MMP16P51512 607 aa10.48□□□□□ -0.73
NPHP1-208ENST00000449600 DDR1Q08345 913 aa10.48□□□□□ -0.73
NPHP1-208ENST00000449600 AMOTQ4VCS5 1084 aa10.48□□□□□ -0.73
NPHP1-208ENST00000449600 HABP4Q5JVS0 413 aaKnown RBP10.48□□□□□ -0.73
NPHP1-208ENST00000449600 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.48□□□□□ -0.73
NPHP1-208ENST00000449600 PHACTR3Q96KR7 559 aa10.48□□□□□ -0.73
NPHP1-208ENST00000449600 TAF1DQ9H5J8 278 aaPredicted RBP10.48□□□□□ -0.73
NPHP1-208ENST00000449600 STK17AQ9UEE5 414 aa10.48□□□□□ -0.73
NPHP1-208ENST00000449600 HTATSF1O43719 755 aaKnown RBP10.47□□□□□ -0.73
NPHP1-208ENST00000449600 SNRPBP14678 240 aaKnown RBP10.47□□□□□ -0.73
NPHP1-208ENST00000449600 TATP17735 454 aaPredicted RBP10.47□□□□□ -0.73
NPHP1-208ENST00000449600 RFC4P35249 363 aa10.47□□□□□ -0.73
NPHP1-208ENST00000449600 MAP2K2P36507 400 aa10.47□□□□□ -0.73
NPHP1-208ENST00000449600 ECE1P42892 770 aa10.47□□□□□ -0.73
NPHP1-208ENST00000449600 GNAI1P63096 354 aa10.47□□□□□ -0.73
NPHP1-208ENST00000449600 DGKZQ13574 1117 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms