RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 PGAP2Q9UHJ9 254 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 CNOT7Q9UIV1 285 aaKnown RBP13.84□□□□□ -0.19
SRRT-205ENST00000449389 GGA1Q9UJY5 639 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
SRRT-205ENST00000449389 SALL2Q9Y467 1007 aaPredicted RBP13.84□□□□□ -0.19
SRRT-205ENST00000449389 RPS12P25398 132 aaKnown RBP13.83□□□□□ -0.2
SRRT-205ENST00000449389 DOK7Q18PE1 504 aa13.83□□□□□ -0.2
SRRT-205ENST00000449389 CWF19L2Q2TBE0 894 aaKnown RBP13.83□□□□□ -0.2
SRRT-205ENST00000449389 MICALL2Q8IY33 904 aa13.83□□□□□ -0.2
SRRT-205ENST00000449389 XDHP47989 1333 aa13.83□□□□□ -0.2
SRRT-205ENST00000449389 RTL9Q8NET4 1388 aa13.83□□□□□ -0.2
SRRT-205ENST00000449389 G3V3G9 751 aa13.82□□□□□ -0.2
SRRT-205ENST00000449389 TRAF5O00463 557 aa13.82□□□□□ -0.2
SRRT-205ENST00000449389 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
SRRT-205ENST00000449389 FMR1Q06787 632 aaKnown RBP eCLIP13.82□□□□□ -0.2
SRRT-205ENST00000449389 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
SRRT-205ENST00000449389 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
SRRT-205ENST00000449389 TTLL11Q8NHH1 800 aa13.82□□□□□ -0.2
SRRT-205ENST00000449389 TRPM4Q8TD43 1214 aa13.82□□□□□ -0.2
SRRT-205ENST00000449389 GPR101Q96P66 508 aaPredicted RBP13.82□□□□□ -0.2
SRRT-205ENST00000449389 MYH16Q9H6N6 1097 aa13.82□□□□□ -0.2
SRRT-205ENST00000449389 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
SRRT-205ENST00000449389 H7C1W4 665 aa13.81□□□□□ -0.2
SRRT-205ENST00000449389 VAMP4O75379 141 aa13.81□□□□□ -0.2
SRRT-205ENST00000449389 EXOSC9Q06265 439 aaKnown RBP13.81□□□□□ -0.2
SRRT-205ENST00000449389 GCKRQ14397 625 aa13.81□□□□□ -0.2
SRRT-205ENST00000449389 UBE3BQ7Z3V4 1068 aa13.81□□□□□ -0.2
SRRT-205ENST00000449389 FAM9BQ8IZU0 186 aa13.81□□□□□ -0.2
SRRT-205ENST00000449389 TNS4Q8IZW8 715 aa13.81□□□□□ -0.2
SRRT-205ENST00000449389 DNAAF4Q8WXU2 420 aa13.81□□□□□ -0.2
SRRT-205ENST00000449389 AIDAQ96BJ3 306 aa13.81□□□□□ -0.2
SRRT-205ENST00000449389 GLIS2Q9BZE0 524 aaPredicted RBP13.81□□□□□ -0.2
SRRT-205ENST00000449389 SHTN1A0MZ66 631 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 ATP2B4P23634 1241 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 ECE1P42892 770 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 CST9Q5W186 159 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 CDC37L1Q7L3B6 337 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 LINS1Q8NG48 757 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 PLA2G12BQ9BX93 195 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 GREM2Q9H772 168 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 KCNQ5Q9NR82 932 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
SRRT-205ENST00000449389 TLL2Q9Y6L7 1015 aa13.8□□□□□ -0.2
SRRT-205ENST00000449389 WDR33Q9C0J8 1336 aaKnown RBP13.8□□□□□ -0.2
SRRT-205ENST00000449389 FOXN1O15353 648 aa13.79□□□□□ -0.2
SRRT-205ENST00000449389 CELF2O95319 508 aaKnown RBP13.79□□□□□ -0.2
SRRT-205ENST00000449389 VIL1P09327 827 aaKnown RBP13.79□□□□□ -0.2
SRRT-205ENST00000449389 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
SRRT-205ENST00000449389 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
SRRT-205ENST00000449389 CAPNS2Q96L46 248 aa13.79□□□□□ -0.2
SRRT-205ENST00000449389 WBP1LQ9NX94 342 aa13.79□□□□□ -0.2
SRRT-205ENST00000449389 TRPM7Q96QT4 1865 aa13.78□□□□□ -0.2
SRRT-205ENST00000449389 IGHMBP2P38935 993 aaKnown RBP13.78□□□□□ -0.2
SRRT-205ENST00000449389 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
SRRT-205ENST00000449389 CASP7P55210 303 aa13.78□□□□□ -0.2
SRRT-205ENST00000449389 MAP2K1Q02750 393 aaPredicted RBP13.78□□□□□ -0.2
SRRT-205ENST00000449389 TBC1D10BQ4KMP7 808 aaPredicted RBP13.78□□□□□ -0.2
SRRT-205ENST00000449389 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
SRRT-205ENST00000449389 MINPP1Q9UNW1 487 aa13.78□□□□□ -0.2
SRRT-205ENST00000449389 ZNF609O15014 1411 aa13.78□□□□□ -0.2
SRRT-205ENST00000449389 CACNA1FO60840 1977 aa13.77□□□□□ -0.21
SRRT-205ENST00000449389 MYH3P11055 1940 aa13.77□□□□□ -0.21
SRRT-205ENST00000449389 RSBN1LQ6PCB5 846 aaPredicted RBP13.77□□□□□ -0.21
SRRT-205ENST00000449389 PODNQ7Z5L7 613 aa13.77□□□□□ -0.21
SRRT-205ENST00000449389 AGBL3Q8NEM8 1001 aa13.77□□□□□ -0.21
SRRT-205ENST00000449389 PRDM10Q9NQV6 1147 aa13.77□□□□□ -0.21
SRRT-205ENST00000449389 MED23Q9ULK4 1368 aa13.77□□□□□ -0.21
SRRT-205ENST00000449389 CSF1RP07333 972 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 ITGA6P23229 1130 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 CCT4P50991 539 aaKnown RBP13.76□□□□□ -0.21
SRRT-205ENST00000449389 KIF4BQ2VIQ3 1234 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
SRRT-205ENST00000449389 CYP4F22Q6NT55 531 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 SAPCD2Q86UD0 394 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 USP48Q86UV5 1035 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 DCPSQ96C86 337 aaKnown RBP13.76□□□□□ -0.21
SRRT-205ENST00000449389 HHIPL1Q96JK4 782 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 ZNF408Q9H9D4 720 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 SCN9AQ15858 1988 aa13.76□□□□□ -0.21
SRRT-205ENST00000449389 THSD7BQ9C0I4 1608 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 USP17L3A6NCW0 530 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 USP17L4A6NCW7 530 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 EGFRP00533 1210 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 ZNF280AP59817 542 aaPredicted RBP13.75□□□□□ -0.21
SRRT-205ENST00000449389 GRM1Q13255 1194 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 BEND3Q5T5X7 828 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 USP17L1Q7RTZ2 530 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 KRT26Q7Z3Y9 468 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 MPHOSPH8Q99549 860 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 LEMD3Q9Y2U8 911 aa13.75□□□□□ -0.21
SRRT-205ENST00000449389 F6X3S4 739 aa13.74□□□□□ -0.21
SRRT-205ENST00000449389 MAP2K2P36507 400 aa13.74□□□□□ -0.21
SRRT-205ENST00000449389 GMLQ99445 158 aa13.74□□□□□ -0.21
SRRT-205ENST00000449389 ZNF521Q96K83 1311 aa13.73□□□□□ -0.21
SRRT-205ENST00000449389 ANKRD18BA2A2Z9 1011 aa13.73□□□□□ -0.21
SRRT-205ENST00000449389 WTIPA6NIX2 430 aaPredicted RBP13.73□□□□□ -0.21
SRRT-205ENST00000449389 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
SRRT-205ENST00000449389 SULF1Q8IWU6 871 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms