RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 CEP128Q6ZU80 1094 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 CEP120Q8N960 986 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 VCXQ9H320 206 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 SERPINA10Q9UK55 444 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 GSTTP1A0A1W2PQM5 241 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 PSME1Q06323 249 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 AACSQ86V21 672 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 GOLGA1Q92805 767 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 ESYT1Q9BSJ8 1104 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 SCAND2PQ9GZW5 306 aaPredicted RBP10.57□□□□□ -0.72
SMC6-207ENST00000448223 BOLA2Q9H3K6 86 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 TCEAL9Q9UHQ7 104 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 PI4KAP2A4QPH2 592 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 TRHP20396 242 aaPredicted RBP10.56□□□□□ -0.72
SMC6-207ENST00000448223 C1orf141Q5JVX7 400 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 CCDC186Q7Z3E2 898 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 PI4KAP1Q8N8J0 262 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 PA2G4Q9UQ80 394 aaKnown RBP10.56□□□□□ -0.72
SMC6-207ENST00000448223 MROH2AA6NES4 1674 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 SHPRHQ149N8 1683 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 USO1O60763 962 aaKnown RBP10.56□□□□□ -0.72
SMC6-207ENST00000448223 ZBTB17Q13105 803 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 FAM76AQ8TAV0 307 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 NEUROD6Q96NK8 337 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 NOL7Q9UMY1 257 aaKnown RBP10.56□□□□□ -0.72
SMC6-207ENST00000448223 UHRF1BP1LA0JNW5 1464 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 CTAGE5O15320 804 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 CAVIN2O95810 425 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 TUBB4BP68371 445 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 ZSCAN26Q16670 478 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 YTHDC2Q9H6S0 1430 aaKnown RBP10.56□□□□□ -0.72
SMC6-207ENST00000448223 TULP4Q9NRJ4 1543 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 PPRC1Q5VV67 1664 aaKnown RBP10.56□□□□□ -0.72
SMC6-207ENST00000448223 ABCC4O15439 1325 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 CCDC178Q5BJE1 867 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 CPLX4Q7Z7G2 160 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 ARFGAP2Q8N6H7 521 aa10.56□□□□□ -0.72
SMC6-207ENST00000448223 ZNF165P49910 485 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 RIC3Q7Z5B4 369 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 UNC5CLQ8IV45 518 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 GPT2Q8TD30 523 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 ZNF365Q70YC5 407 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
SMC6-207ENST00000448223 GLI2P10070 1586 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 ANKRD18BA2A2Z9 1011 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 GNAT3A8MTJ3 354 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 ZNF530Q6P9A1 599 aaPredicted RBP10.55□□□□□ -0.72
SMC6-207ENST00000448223 CCDC43Q96MW1 224 aaKnown RBP10.55□□□□□ -0.72
SMC6-207ENST00000448223 ADGRB3O60242 1522 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 SH3BGRP55822 239 aaPredicted RBP10.55□□□□□ -0.72
SMC6-207ENST00000448223 DIXDC1Q155Q3 683 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 HDXQ7Z353 690 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 ERO1AQ96HE7 468 aa10.55□□□□□ -0.72
SMC6-207ENST00000448223 DDX19AQ9NUU7 478 aaKnown RBP10.55□□□□□ -0.72
SMC6-207ENST00000448223 TUBBP07437 444 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 ARHGAP25P42331 645 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 CKAP4Q07065 602 aaKnown RBP10.54□□□□□ -0.72
SMC6-207ENST00000448223 VEZTQ9HBM0 779 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 ZFYVE9O95405 1425 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 TACC1O75410 805 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 ATP11AP98196 1134 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 CACNA2D3Q8IZS8 1091 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 PDRG1Q9NUG6 133 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 PDE1CQ14123 709 aaPredicted RBP10.54□□□□□ -0.72
SMC6-207ENST00000448223 CCDC38Q502W7 563 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 TAOK3Q9H2K8 898 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
SMC6-207ENST00000448223 CCDC85AQ96PX6 553 aaPredicted RBP10.54□□□□□ -0.72
SMC6-207ENST00000448223 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
SMC6-207ENST00000448223 NDUFAB1O14561 156 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 PFDN1O60925 122 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 TSNAXIP1Q2TAA8 658 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 GBP7Q8N8V2 638 aaPredicted RBP10.53□□□□□ -0.72
SMC6-207ENST00000448223 LRRC2Q9BYS8 371 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 EYA1Q99502 592 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMC6-207ENST00000448223 SETBP1Q9Y6X0 1596 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 HIP1O00291 1037 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 CHMLP26374 656 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 DDIT3P35638 169 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 GUCY1B3Q02153 619 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 DNM1Q05193 864 aaKnown RBP10.53□□□□□ -0.72
SMC6-207ENST00000448223 CTCFLQ8NI51 663 aaPredicted RBP10.53□□□□□ -0.72
SMC6-207ENST00000448223 ALS2CR12Q96Q35 445 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 RIMS2Q9UQ26 1411 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 YEATS4O95619 227 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 AFAP1L1Q8TED9 768 aa10.53□□□□□ -0.72
SMC6-207ENST00000448223 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.72
SMC6-207ENST00000448223 DNA2P51530 1060 aa10.52□□□□□ -0.72
SMC6-207ENST00000448223 DDX27Q96GQ7 796 aaKnown RBP10.52□□□□□ -0.72
SMC6-207ENST00000448223 CHPF2Q9P2E5 772 aa10.52□□□□□ -0.72
SMC6-207ENST00000448223 MXRA7P84157 204 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 CCDC155Q8N6L0 562 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 CPLX3Q8WVH0 158 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 MRFAP1L1Q96HT8 127 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 JADE2Q9NQC1 790 aa10.52□□□□□ -0.73
SMC6-207ENST00000448223 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms