RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PPM1EQ8WY54 764 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 ANKIB1Q9P2G1 1089 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 UQCRFS1P1P0C7P4 283 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 ACTN2P35609 894 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 ATP8B2P98198 1209 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 RTL1A6NKG5 1358 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 ATP5J2-PTCD1G3V325 749 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 KRT23Q9C075 422 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 KIF14Q15058 1648 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 STAT6P42226 847 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 KIF5AQ12840 1032 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 MCMDC2Q4G0Z9 681 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 Q6ZUG5 572 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 DRC1Q96MC2 740 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 PHF8Q9UPP1 1060 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 IKBKGQ9Y6K9 419 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 A0A1W2PRG0 241 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 HMGB2P26583 209 aaKnown RBP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 MARCKSP29966 332 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 AEBP2Q6ZN18 517 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 SYCP3Q8IZU3 236 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 ARFGAP2Q8N6H7 521 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 OGFRQ9NZT2 677 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 ARHGEF11O15085 1522 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 NUTM2BA6NNL0 878 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 NUTM2EB1AL46 878 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 ZPR1O75312 459 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 GPTP24298 496 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC6Q16204 474 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 NUTM2AQ8IVF1 878 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC77Q9BR77 488 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 VAT1LQ9HCJ6 419 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 TBCAO75347 108 aaKnown RBP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 PRPHP41219 470 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 RTN1Q16799 776 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 SPATA24Q86W54 205 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 MICALL1Q8N3F8 863 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 SCLT1Q96NL6 688 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 CDC5LQ99459 802 aaKnown RBP8.86□□□□□ -0.99
NEDD9-204ENST00000448183 CNNM2Q9H8M5 875 aa8.86□□□□□ -0.99
NEDD9-204ENST00000448183 BAG3O95817 575 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 MRPL50Q8N5N7 158 aaKnown RBP8.85□□□□□ -0.99
NEDD9-204ENST00000448183 DCTPP1Q9H773 170 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 RASAL2Q9UJF2 1139 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 WDR62O43379 1518 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 ALDH1L1O75891 902 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 SYT10Q6XYQ8 523 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 NBPF11Q86T75 865 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 ZGPATQ8N5A5 531 aaKnown RBP8.85□□□□□ -0.99
NEDD9-204ENST00000448183 OTUD6BQ8N6M0 293 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 PPP1R14CQ8TAE6 165 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 TBC1D5Q92609 795 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 ESR2Q92731 530 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 TEX13AQ9BXU3 409 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-204ENST00000448183 STMN4Q9H169 189 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-204ENST00000448183 TRIM75PA6NK02 468 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 AK2P54819 239 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 ANKS4BQ8N8V4 417 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC97Q96F63 343 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC42Q96M95 316 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 C14orf93Q9H972 538 aaKnown RBP8.85□□□□□ -0.99
NEDD9-204ENST00000448183 VPS18Q9P253 973 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 PPP1R1BQ9UD71 204 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-204ENST00000448183 FAM135AQ9P2D6 1515 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 KIF4AO95239 1232 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 ANXA1P04083 346 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 MSL1Q68DK7 614 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC121Q6ZUS5 278 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 C16orf71Q8IYS4 520 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-204ENST00000448183 ERMNQ8TAM6 284 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 IFNKQ9P0W0 207 aa8.85□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC174Q6PII3 467 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 FERMT2Q96AC1 680 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 TTC41PQ6P2S7 1318 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 SNRPA1P09661 255 aaKnown RBP8.84□□□□□ -0.99
NEDD9-204ENST00000448183 TTC14Q96N46 770 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 GNAQP50148 359 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 VAV2P52735 878 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 ASIC1P78348 528 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC129Q6ZRS4 1044 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 LMBR1Q8WVP7 490 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 FERMT1Q9BQL6 677 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 CRNKL1Q9BZJ0 848 aaKnown RBP8.84□□□□□ -0.99
NEDD9-204ENST00000448183 MMRN2Q9H8L6 949 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 STX8Q9UNK0 236 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 PHACTR2O75167 634 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 KARSQ15046 597 aaKnown RBP8.84□□□□□ -0.99
NEDD9-204ENST00000448183 DHX58Q96C10 678 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 ERO1AQ96HE7 468 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 IQCGQ9H095 443 aaKnown RBP8.84□□□□□ -0.99
NEDD9-204ENST00000448183 LZTFL1Q9NQ48 299 aa8.84□□□□□ -0.99
NEDD9-204ENST00000448183 TTC31Q49AM3 519 aaPredicted RBP8.83□□□□□ -1
NEDD9-204ENST00000448183 ZNF569Q5MCW4 686 aa8.83□□□□□ -1
NEDD9-204ENST00000448183 SMAP1Q8IYB5 467 aaPredicted RBP8.83□□□□□ -1
NEDD9-204ENST00000448183 PLB1Q6P1J6 1458 aa8.83□□□□□ -1
NEDD9-204ENST00000448183 IGSF3O75054 1194 aa8.83□□□□□ -1
NEDD9-204ENST00000448183 NMIQ13287 307 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms