RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PLEKHG4Q58EX7 1191 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 SH3PXD2AQ5TCZ1 1133 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 KIAA0825Q8IV33 1275 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 SVOPQ8N4V2 548 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 CCDC155Q8N6L0 562 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 EPS8L3Q8TE67 593 aaKnown RBP5.29□□□□□ -1.56
PMS1-216ENST00000447734 CCDC74AQ96AQ1 378 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 SRCIN1Q9C0H9 1055 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 ARHGEF10LQ9HCE6 1279 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 KBTBD4Q9NVX7 518 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 LOC102724159A0A0B4J2E5 919 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 SLC35F4A4IF30 521 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 TTLL8A6PVC2 850 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 S100BP04271 92 aaPredicted RBP5.28□□□□□ -1.56
PMS1-216ENST00000447734 NOS2P35228 1153 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 CHMP4BP1P59074 171 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 PWP2Q15269 919 aaKnown RBP5.28□□□□□ -1.56
PMS1-216ENST00000447734 TEAD4Q15561 434 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.28□□□□□ -1.56
PMS1-216ENST00000447734 GORABQ5T7V8 394 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 USPL1Q5W0Q7 1092 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 ZNF526Q8TF50 670 aaPredicted RBP5.28□□□□□ -1.56
PMS1-216ENST00000447734 DEPDC7Q96QD5 511 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 PHACTR1Q9C0D0 580 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 SLC52A1Q9NWF4 448 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 SNTG2Q9NY99 539 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 CABP1Q9NZU7 370 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 CHPF2Q9P2E5 772 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 STRIP2Q9ULQ0 834 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 R3HCC1Q9Y3T6 440 aaKnown RBP5.28□□□□□ -1.56
PMS1-216ENST00000447734 MRVI1Q9Y6F6 885 aa5.28□□□□□ -1.56
PMS1-216ENST00000447734 CDC45O75419 566 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 UPP2O95045 317 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 IL2RAP01589 272 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 IGHA1P01876 353 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 ETFBP38117 255 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 SNX29Q8TEQ0 813 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 ZDHHC1Q8WTX9 485 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 L3MBTL2Q969R5 705 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 XAGE2Q96GT9 111 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 TSEN34Q9BSV6 310 aaKnown RBP5.27□□□□□ -1.57
PMS1-216ENST00000447734 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 IRF2BPLQ9H1B7 796 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 TMX1Q9H3N1 280 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 FOXD3Q9UJU5 478 aaPredicted RBP5.27□□□□□ -1.57
PMS1-216ENST00000447734 EFR3BQ9Y2G0 817 aa5.27□□□□□ -1.57
PMS1-216ENST00000447734 LILRA1O75019 489 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 GADD45BO75293 160 aaPredicted RBP5.26□□□□□ -1.57
PMS1-216ENST00000447734 PWP1Q13610 501 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 RAB33AQ14088 237 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 RASA3Q14644 834 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 NXPE4Q6UWF7 544 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 Q6ZVU0 165 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 RELL1Q8IUW5 271 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 RPUSD2Q8IZ73 545 aaKnown RBP5.26□□□□□ -1.57
PMS1-216ENST00000447734 VWA5B2Q8N398 1253 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 HNRNPLLQ8WVV9 542 aaKnown RBP5.26□□□□□ -1.57
PMS1-216ENST00000447734 CNKSR1Q969H4 720 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 NOC4LQ9BVI4 516 aaKnown RBP5.26□□□□□ -1.57
PMS1-216ENST00000447734 FANCLQ9NW38 375 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 DDX56Q9NY93 547 aaKnown RBP5.26□□□□□ -1.57
PMS1-216ENST00000447734 G3BP2Q9UN86 482 aaKnown RBP5.26□□□□□ -1.57
PMS1-216ENST00000447734 TTF2Q9UNY4 1162 aaKnown RBP5.26□□□□□ -1.57
PMS1-216ENST00000447734 PARP3Q9Y6F1 533 aa5.26□□□□□ -1.57
PMS1-216ENST00000447734 SENP3-EIF4A1A0A087X0R7 540 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 CCDC85CA6NKD9 419 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 SPINT1O43278 529 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 KLF4O43474 513 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 TNFRSF21O75509 655 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 ITGA6P23229 1130 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 TAF7LQ5H9L4 462 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 LYPD4Q6UWN0 246 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 LRP10Q7Z4F1 713 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 ZNF438Q7Z4V0 828 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 EXOC8Q8IYI6 725 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 CCDC116Q8IYX3 515 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 SH3TC2Q8TF17 1288 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 CPLX3Q8WVH0 158 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 APPBP2Q92624 585 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 RSRP1Q9BUV0 290 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 BCO2Q9BYV7 579 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 NPHS2Q9NP85 383 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 GINM1Q9NU53 330 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 ADAMTS1Q9UHI8 967 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 FAN1Q9Y2M0 1017 aa5.25□□□□□ -1.57
PMS1-216ENST00000447734 CCDC194A0A1B0GVG4 234 aa5.24□□□□□ -1.57
PMS1-216ENST00000447734 FAM221BA6H8Z2 402 aa5.24□□□□□ -1.57
PMS1-216ENST00000447734 MINDY4BA8MYZ0 360 aa5.24□□□□□ -1.57
PMS1-216ENST00000447734 ADAM23O75077 832 aa5.24□□□□□ -1.57
PMS1-216ENST00000447734 PHACTR2O75167 634 aa5.24□□□□□ -1.57
PMS1-216ENST00000447734 MICAL2O94851 1124 aa5.24□□□□□ -1.57
PMS1-216ENST00000447734 MAP4K4O95819 1239 aaPredicted RBP5.24□□□□□ -1.57
PMS1-216ENST00000447734 GSTT1P30711 240 aa5.24□□□□□ -1.57
PMS1-216ENST00000447734 GBP2P32456 591 aaPredicted RBP5.24□□□□□ -1.57
PMS1-216ENST00000447734 ADD1P35611 737 aaKnown RBP5.24□□□□□ -1.57
PMS1-216ENST00000447734 EIF4A3P38919 411 aaKnown RBP5.24□□□□□ -1.57
PMS1-216ENST00000447734 CTSOP43234 321 aaPredicted RBP5.24□□□□□ -1.57
PMS1-216ENST00000447734 COL9A2Q14055 689 aaPredicted RBP5.24□□□□□ -1.57
PMS1-216ENST00000447734 PPP1R26Q5T8A7 1209 aaPredicted RBP5.24□□□□□ -1.57
PMS1-216ENST00000447734 KANK3Q6NY19 840 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms