RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 PTPN23Q9H3S7 1636 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 SSH2Q76I76 1423 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 EVI5O60447 810 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 MSL1Q68DK7 614 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 GAS2L3Q86XJ1 694 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 FAM192AQ9GZU8 254 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 TTC12Q9H892 705 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 FGD6Q6ZV73 1430 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 PBRM1Q86U86 1689 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 CTAGE15A4D2H0 777 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 CTAGE8P0CG41 777 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 PSME1Q06323 249 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 PODNQ7Z5L7 613 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 CTAGE6Q86UF2 777 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 CTAGE4Q8IX94 777 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 STAMBPL1Q96FJ0 436 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 STMN4Q9H169 189 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 ZNF215Q9UL58 517 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 GCOM1H8Y6P7 765 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 TBC1D10BQ4KMP7 808 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 MYOCDQ8IZQ8 938 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 SPRYD3Q8NCJ5 442 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 TDRD7Q8NHU6 1098 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 ZNF396Q96N95 335 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 MYBL2P10244 700 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 CFAP58Q5T655 872 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 PPFIBP2Q8ND30 876 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 ZNF653Q96CK0 615 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 SGSM3Q96HU1 749 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.32□□□□□ -1.884e-10■■■■□ 20.7
CHD9-203ENST00000447540 NOP53Q9NZM5 478 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 CTTNBP2NLQ9P2B4 639 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 SYNRGQ9UMZ2 1314 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 ERICH2A1L162 156 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 RASSF10A6NK89 507 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 KRT4P19013 534 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 EVCP57679 992 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 RUFY4Q6ZNE9 571 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 ANKRD13AQ8IZ07 590 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 THRAP3Q9Y2W1 955 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 ZEB2O60315 1214 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 URI1O94763 535 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 FESP07332 822 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 SMTNP53814 917 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 HHATQ5VTY9 493 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 OLFM4Q6UX06 510 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 NOL8Q76FK4 1167 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 OGFOD1Q8N543 542 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 POLKQ9UBT6 870 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 PRXQ9BXM0 1461 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 KDRP35968 1356 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 ANKRD33BA6NCL7 494 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 HIP1O00291 1037 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 POLD1P28340 1107 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 TMTC2Q8N394 836 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 SPAG5Q96R06 1193 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 SIL1Q9H173 461 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 RANBP17Q9H2T7 1088 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 TSPY4P0CV99 314 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 TSPY10P0CW01 314 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 DEUP1Q05D60 604 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 PRPF4BQ13523 1007 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 TRERF1Q96PN7 1200 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 ZSCAN16Q9H4T2 348 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 MYH10P35580 1976 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 GOLGA8KD6RF30 607 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 BIRC5O15392 142 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 IQCB1Q15051 598 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 DUSP27Q5VZP5 1158 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 FAM43BQ6ZT52 329 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 ENAHQ8N8S7 591 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 RMI1Q9H9A7 625 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 JADE2Q9NQC1 790 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 TBC1D2BQ9UPU7 963 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 NEK2P51955 445 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 AFAP1Q8N556 730 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 MAB21L3Q8N8X9 362 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 DHTKD1Q96HY7 919 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 KCNA4P22459 653 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 ACADVLP49748 655 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 APOBRQ0VD83 1088 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 LAMB3Q13751 1172 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 PREPLQ4J6C6 727 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 AMOTQ4VCS5 1084 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 HELBQ8NG08 1087 aaPredicted RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 CCDC51Q96ER9 411 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 RBM33Q96EV2 1170 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 CTNNAL1Q9UBT7 734 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 EPRSP07814 1512 aaKnown RBP3.31□□□□□ -1.88
CHD9-203ENST00000447540 GOLGA6CA6NDK9 693 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 HIP1RO75146 1068 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 GOLGA6DP0CG33 693 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 TRIM29Q14134 588 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 PPP2R5EQ16537 467 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 ODF2Q5BJF6 829 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 SAMD3Q8N6K7 520 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 ACRBPQ8NEB7 543 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 GPATCH3Q96I76 525 aa3.31□□□□□ -1.88
CHD9-203ENST00000447540 LZTS2Q9BRK4 669 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms