RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 PCDHB15Q9Y5E8 787 aa7.16□□□□□ -1.26
PROM1-201ENST00000447510 NHSQ6T4R5 1651 aa7.16□□□□□ -1.26
PROM1-201ENST00000447510 RPS8P62241 208 aaKnown RBP7.16□□□□□ -1.26
PROM1-201ENST00000447510 LRP10Q7Z4F1 713 aa7.16□□□□□ -1.26
PROM1-201ENST00000447510 SMAP1Q8IYB5 467 aaPredicted RBP7.16□□□□□ -1.26
PROM1-201ENST00000447510 HELBQ8NG08 1087 aaPredicted RBP7.16□□□□□ -1.26
PROM1-201ENST00000447510 C22orf23Q9BZE7 217 aa7.16□□□□□ -1.26
PROM1-201ENST00000447510 GREM2Q9H772 168 aa7.16□□□□□ -1.26
PROM1-201ENST00000447510 CGNQ9P2M7 1197 aaKnown RBP7.16□□□□□ -1.26
PROM1-201ENST00000447510 BCS1LQ9Y276 419 aa7.16□□□□□ -1.26
PROM1-201ENST00000447510 WNK3Q9BYP7 1800 aa7.16□□□□□ -1.26
PROM1-201ENST00000447510 NTSR2O95665 410 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 BRIP1Q9BX63 1249 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 LRRCC1Q9C099 1032 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 ANTXR1Q9H6X2 564 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 SPDYE4A6NLX3 237 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 DDR1Q08345 913 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 ZNF771Q7L3S4 317 aaPredicted RBP7.15□□□□□ -1.26
PROM1-201ENST00000447510 CNKSR1Q969H4 720 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 GCC1Q96CN9 775 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 SEC31BQ9NQW1 1179 aa7.15□□□□□ -1.26
PROM1-201ENST00000447510 PNMA6EA0A0J9YXQ4 647 aa7.15□□□□□ -1.27
PROM1-201ENST00000447510 PPP4R3BQ5MIZ7 849 aa7.15□□□□□ -1.27
PROM1-201ENST00000447510 SHANK3Q9BYB0 1731 aa7.15□□□□□ -1.27
PROM1-201ENST00000447510 POLRMTO00411 1230 aaKnown RBP7.14□□□□□ -1.27
PROM1-201ENST00000447510 IFIT1P09914 478 aaKnown RBP7.14□□□□□ -1.27
PROM1-201ENST00000447510 CHRNA5P30532 468 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 PLCB2Q00722 1185 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 EPHA10Q5JZY3 1008 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 AACSQ86V21 672 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 TTLL11Q8NHH1 800 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 KIF1BPQ96EK5 621 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 AKAP2Q9Y2D5 859 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 KDM3BQ7LBC6 1761 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 NPR1P16066 1061 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 IL15P40933 162 aaPredicted RBP7.14□□□□□ -1.27
PROM1-201ENST00000447510 RNF214Q8ND24 703 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 CDHR2Q9BYE9 1310 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 A0A0G2JLW4 131 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 TRIM6-TRIM34B2RNG4 842 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 RGL2O15211 777 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 SMARCA5O60264 1052 aaPredicted RBP7.14□□□□□ -1.27
PROM1-201ENST00000447510 RAB11FIP3O75154 756 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 TM4SF1P30408 202 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 GPR162Q16538 588 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 TNPO1Q92973 898 aaKnown RBP7.14□□□□□ -1.27
PROM1-201ENST00000447510 MASTLQ96GX5 879 aa7.14□□□□□ -1.27
PROM1-201ENST00000447510 EYA2O00167 538 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 CCDC158Q5M9N0 1113 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 CAVIN1Q6NZI2 390 aaKnown RBP7.13□□□□□ -1.27
PROM1-201ENST00000447510 GNL3LQ9NVN8 582 aaKnown RBP7.13□□□□□ -1.27
PROM1-201ENST00000447510 PDZRN3Q9UPQ7 1066 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 ATP10DQ9P241 1426 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 SLC5A1P13866 664 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
PROM1-201ENST00000447510 TTLL6Q8N841 843 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 FOXD4L4Q8WXT5 416 aaPredicted RBP7.13□□□□□ -1.27
PROM1-201ENST00000447510 TBC1D32Q96NH3 1257 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 CCDC8Q9H0W5 538 aaPredicted RBP7.13□□□□□ -1.27
PROM1-201ENST00000447510 TAF5LO75529 589 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 TTC39AQ5SRH9 613 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 ANKRD2Q9GZV1 360 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 PIM2Q9P1W9 311 aa7.13□□□□□ -1.27
PROM1-201ENST00000447510 ZBTB22O15209 634 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 CAVIN4Q5BKX8 364 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 DALRD3Q5D0E6 543 aaKnown RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 DPP8Q6V1X1 898 aaPredicted RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 MTERF4Q7Z6M4 381 aaKnown RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 PPEF1O14829 653 aaPredicted RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 RIMBP2O15034 1052 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 BBOX1O75936 387 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 ATP2B3Q16720 1220 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 RHPN1Q8TCX5 695 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 ZC3H12CQ9C0D7 883 aaKnown RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 UFL1O94874 794 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 DPEP1P16444 411 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 FOXO4P98177 505 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 TFCP2Q12800 502 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 CHAF1AQ13111 956 aaPredicted RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 GRAPQ13588 217 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 GRAPLQ8TC17 118 aaPredicted RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 SSH3Q8TE77 659 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 CELF1Q92879 486 aaKnown RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 PUS3Q9BZE2 481 aaKnown RBP7.12□□□□□ -1.27
PROM1-201ENST00000447510 C4BP0C0L5 1744 aa7.12□□□□□ -1.27
PROM1-201ENST00000447510 ADAMTS7Q9UKP4 1686 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 ERC2O15083 957 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 LRRC24Q50LG9 513 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 ARHGAP27Q6ZUM4 889 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 RILPL2Q969X0 211 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 PXDNLA1KZ92 1463 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 C21orf2O43822 256 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 HDAC1Q13547 482 aaPredicted RBP7.11□□□□□ -1.27
PROM1-201ENST00000447510 SF3B3Q15393 1217 aaKnown RBP7.11□□□□□ -1.27
PROM1-201ENST00000447510 SLC10A5Q5PT55 438 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 MCTP1Q6DN14 999 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 CHD1LQ86WJ1 897 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 DNAJC2Q99543 621 aaKnown RBP7.11□□□□□ -1.27
PROM1-201ENST00000447510 GGA1Q9UJY5 639 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 SKOR2Q2VWA4 1001 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms