RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 C2CD2LO14523 706 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 SIN3BO75182 1162 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 TCF3P15923 654 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 MX2P20592 715 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 EIF4BP23588 611 aaKnown RBP7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 GPLD1P80108 840 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 GAS6Q14393 721 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 PCSK7Q16549 785 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 KIAA0319Q5VV43 1072 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 SYT9Q86SS6 491 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 NCAPG2Q86XI2 1143 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 TRPM4Q8TD43 1214 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 SRCIN1Q9C0H9 1055 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 SUV39H2Q9H5I1 410 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 C12orf49Q9H741 205 aa7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 NSFL1CQ9UNZ2 370 aaKnown RBP7.15□□□□□ -1.26
HMGB1P16-201ENST00000447155 A0A1W2PP55 124 aa7.14□□□□□ -1.27
HMGB1P16-201ENST00000447155 VSIG8P0DPA2 414 aa7.14□□□□□ -1.27
HMGB1P16-201ENST00000447155 LDLRAD1Q5T700 205 aa7.14□□□□□ -1.27
HMGB1P16-201ENST00000447155 BCO2Q9BYV7 579 aa7.14□□□□□ -1.27
HMGB1P16-201ENST00000447155 OSBPL7Q9BZF2 842 aa7.14□□□□□ -1.27
HMGB1P16-201ENST00000447155 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P16-201ENST00000447155 SCAMP3O14828 347 aaKnown RBP7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 ARAFP10398 606 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 MAP2K3P46734 347 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 COL13A1Q5TAT6 717 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 PEAR1Q5VY43 1037 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 ZNF787Q6DD87 383 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 CEP120Q8N960 986 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 CRELD1Q96HD1 420 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 SPACA7Q96KW9 195 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 NSUN5Q96P11 429 aaKnown RBP7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 LATS2Q9NRM7 1088 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 MBIPQ9NS73 344 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 PPP4R2Q9NY27 417 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 FAM8A1Q9UBU6 413 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 TRAK1Q9UPV9 953 aa7.13□□□□□ -1.27
HMGB1P16-201ENST00000447155 ADH6P28332 368 aa7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 PCBP4P57723 403 aaKnown RBP7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 GRM2Q14416 872 aa7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 NXPE4Q6UWF7 544 aa7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 TMEM87AQ8NBN3 555 aa7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 TNFRSF25Q93038 417 aa7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 UBE2OQ9C0C9 1292 aaKnown RBP7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 EHD4Q9H223 541 aa7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
HMGB1P16-201ENST00000447155 LOC102724428A0A0B4J2F2 783 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 ZBTB42B2RXF5 422 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 CTSHP09668 335 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 SIK1P57059 783 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 TBC1D8BQ0IIM8 1120 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 PRPF40BQ6NWY9 871 aaKnown RBP7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 GLIS3Q8NEA6 775 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 SLC16A10Q8TF71 515 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 CNTNAP3BQ96NU0 1288 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 OSMRQ99650 979 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 ZKSCAN3Q9BRR0 538 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 CNTNAP3Q9BZ76 1288 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 IGFLR1Q9H665 355 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 LIN7BQ9HAP6 207 aa7.11□□□□□ -1.27
HMGB1P16-201ENST00000447155 ADARB2-AS1A8MUL3 147 aa7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 TERTO14746 1132 aaKnown RBP7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 GHRHP01286 108 aa7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 USP17L7P0C7H9 530 aa7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 MLLT1Q03111 559 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 RBSNQ9H1K0 784 aa7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 METTL5Q9NRN9 209 aaKnown RBP7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 DZANK1Q9NVP4 752 aa7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 KLF15Q9UIH9 416 aa7.1□□□□□ -1.27
HMGB1P16-201ENST00000447155 J3QW42 95 aa7.09□□□□□ -1.27
HMGB1P16-201ENST00000447155 ACPPP15309 386 aa7.09□□□□□ -1.27
HMGB1P16-201ENST00000447155 GSTT1P30711 240 aa7.09□□□□□ -1.27
HMGB1P16-201ENST00000447155 CCNJLQ8IV13 435 aa7.09□□□□□ -1.27
HMGB1P16-201ENST00000447155 TMEM102Q8N9M5 508 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P16-201ENST00000447155 TCF12Q99081 682 aa7.09□□□□□ -1.27
HMGB1P16-201ENST00000447155 COL25A1Q9BXS0 654 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P16-201ENST00000447155 SLC6A14Q9UN76 642 aa7.09□□□□□ -1.27
HMGB1P16-201ENST00000447155 IGF1RP08069 1367 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 XRCC5P13010 732 aaKnown RBP7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 EIF2AK2P19525 551 aaKnown RBP7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 ADH7P40394 386 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 NFX1Q12986 1120 aaKnown RBP7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 HFE2Q6ZVN8 426 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 FAM35AQ86V20 835 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 GOLGA6L1Q8N7Z2 621 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 MDFIQ99750 246 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 PBX4Q9BYU1 374 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 BHLHE41Q9C0J9 482 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 ABCB6Q9NP58 842 aa7.08□□□□□ -1.28
HMGB1P16-201ENST00000447155 TMEM238LA0A1B0GVL6 79 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 NEURL1BA8MQ27 555 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 NFKBIEO00221 500 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 ZNF76P36508 570 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 ST13P50502 369 aaKnown RBP7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 HDLBPQ00341 1268 aaKnown RBP7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 FANCCQ00597 558 aa7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 TAF1CQ15572 869 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P16-201ENST00000447155 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms