RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 SIK1P57059 783 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
PTCH2-203ENST00000447098 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 TNS3Q68CZ2 1445 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 SART3Q15020 963 aaKnown RBP13.23□□□□□ -0.29
PTCH2-203ENST00000447098 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
PTCH2-203ENST00000447098 QTRT2Q9H974 415 aaKnown RBP13.23□□□□□ -0.29
PTCH2-203ENST00000447098 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 SH3TC1Q8TE82 1336 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
PTCH2-203ENST00000447098 STX6O43752 255 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTCH2-203ENST00000447098 MAP3K12Q12852 859 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 NAPBQ9H115 298 aa13.23□□□□□ -0.29
PTCH2-203ENST00000447098 UTP14CQ5TAP6 766 aaKnown RBP13.22□□□□□ -0.29
PTCH2-203ENST00000447098 OVOS2A0A0J9YW53 1432 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 OVOS2Q6IE36 1432 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 ANAPC15P60006 121 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 DZIP1Q86YF9 867 aaKnown RBP13.22□□□□□ -0.29
PTCH2-203ENST00000447098 CCDC191Q8NCU4 936 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
PTCH2-203ENST00000447098 ZSCAN22P10073 491 aaPredicted RBP13.22□□□□□ -0.29
PTCH2-203ENST00000447098 CAMK4Q16566 473 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 IMMTQ16891 758 aaKnown RBP13.22□□□□□ -0.29
PTCH2-203ENST00000447098 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 GOLGA6L19H0YKK7 550 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 KIF20AO95235 890 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 CPA1P15085 419 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
PTCH2-203ENST00000447098 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
PTCH2-203ENST00000447098 TRAPPC3LQ5T215 181 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 LARP1BQ659C4 914 aaKnown RBP13.22□□□□□ -0.29
PTCH2-203ENST00000447098 PALD1Q9ULE6 856 aa13.22□□□□□ -0.29
PTCH2-203ENST00000447098 TECPR2O15040 1411 aa13.21□□□□□ -0.29
PTCH2-203ENST00000447098 A0A1B0GUL7 405 aa13.21□□□□□ -0.29
PTCH2-203ENST00000447098 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
PTCH2-203ENST00000447098 F8W031 263 aaPredicted RBP13.21□□□□□ -0.29
PTCH2-203ENST00000447098 CCT2P78371 535 aaKnown RBP13.21□□□□□ -0.29
PTCH2-203ENST00000447098 SIGLEC1Q9BZZ2 1709 aa13.21□□□□□ -0.3
PTCH2-203ENST00000447098 SMIM5Q71RC9 77 aa13.21□□□□□ -0.3
PTCH2-203ENST00000447098 EYA2O00167 538 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 TCIRG1Q13488 830 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 SLC9C2Q5TAH2 1124 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 CTNNA3Q9UI47 895 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 KIAA1210Q9ULL0 1709 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
PTCH2-203ENST00000447098 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 TRIM37O94972 964 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 NUP62CLQ9H1M0 184 aa13.2□□□□□ -0.3
PTCH2-203ENST00000447098 KCNQ2O43526 872 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 TNNT1P13805 278 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 CHMLP26374 656 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 MAP3K11Q16584 847 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 TNMDQ9H2S6 317 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 RBM8AQ9Y5S9 174 aaKnown RBP13.19□□□□□ -0.3
PTCH2-203ENST00000447098 CHST3Q7LGC8 479 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 PAG1Q9NWQ8 432 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 LIMCH1Q9UPQ0 1083 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 USP5P45974 858 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
PTCH2-203ENST00000447098 NECAB1Q8N987 351 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 UBAC1Q9BSL1 405 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 RANBP6O60518 1105 aaKnown RBP13.19□□□□□ -0.3
PTCH2-203ENST00000447098 APBA3O96018 575 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
PTCH2-203ENST00000447098 CD163L1Q9NR16 1453 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 BECN2A8MW95 431 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 ZNF213O14771 459 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 KRT85P78386 507 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 SAFBQ15424 915 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTCH2-203ENST00000447098 TNNI3KQ59H18 835 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 CKAP2LQ8IYA6 745 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
PTCH2-203ENST00000447098 FPGT-TNNI3KV9GXZ4 949 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 PTGS1P23219 599 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 CLSTN1O94985 981 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 F13A1P00488 732 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 DNM1Q05193 864 aaKnown RBP13.18□□□□□ -0.3
PTCH2-203ENST00000447098 CUL4AQ13619 759 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 LRRC24Q50LG9 513 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
PTCH2-203ENST00000447098 MED14O60244 1454 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 NRDCO43847 1150 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 ZSCAN20P17040 1043 aaPredicted RBP13.17□□□□□ -0.3
PTCH2-203ENST00000447098 SYT1P21579 422 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 ST5P78524 1137 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 KRT32Q14532 448 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 UNC5CLQ8IV45 518 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 PUS3Q9BZE2 481 aaKnown RBP13.17□□□□□ -0.3
PTCH2-203ENST00000447098 CCDC66A2RUB6 948 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms