RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PODXL2Q9NZ53 605 aa23.37■■□□□ 1.33
COL9A1-205ENST00000447041 CNOT7Q9UIV1 285 aaKnown RBP23.37■■□□□ 1.33
COL9A1-205ENST00000447041 RTL9Q8NET4 1388 aa23.37■■□□□ 1.33
COL9A1-205ENST00000447041 SCN9AQ15858 1988 aa23.36■■□□□ 1.33
COL9A1-205ENST00000447041 UFL1O94874 794 aa23.36■■□□□ 1.33
COL9A1-205ENST00000447041 MICALL2Q8IY33 904 aa23.36■■□□□ 1.33
COL9A1-205ENST00000447041 KCNQ5Q9NR82 932 aa23.36■■□□□ 1.33
COL9A1-205ENST00000447041 THSD7BQ9C0I4 1608 aa23.35■■□□□ 1.33
COL9A1-205ENST00000447041 NEURL1BA8MQ27 555 aa23.35■■□□□ 1.33
COL9A1-205ENST00000447041 CTSWP56202 376 aa23.35■■□□□ 1.33
COL9A1-205ENST00000447041 NEXNQ0ZGT2 675 aa23.35■■□□□ 1.33
COL9A1-205ENST00000447041 CST9Q5W186 159 aa23.35■■□□□ 1.33
COL9A1-205ENST00000447041 GLIS2Q9BZE0 524 aaPredicted RBP23.35■■□□□ 1.33
COL9A1-205ENST00000447041 ANKIB1Q9P2G1 1089 aa23.35■■□□□ 1.33
COL9A1-205ENST00000447041 FOXN1O15353 648 aa23.34■■□□□ 1.33
COL9A1-205ENST00000447041 FLIIQ13045 1269 aa23.34■■□□□ 1.33
COL9A1-205ENST00000447041 ANKRD18AQ8IVF6 992 aa23.34■■□□□ 1.33
COL9A1-205ENST00000447041 GGA1Q9UJY5 639 aa23.34■■□□□ 1.33
COL9A1-205ENST00000447041 TNS4Q8IZW8 715 aa23.33■■□□□ 1.33
COL9A1-205ENST00000447041 ZC3H12CQ9C0D7 883 aaKnown RBP23.33■■□□□ 1.33
COL9A1-205ENST00000447041 PGAP2Q9UHJ9 254 aa23.33■■□□□ 1.33
COL9A1-205ENST00000447041 WDR33Q9C0J8 1336 aaKnown RBP23.33■■□□□ 1.32
COL9A1-205ENST00000447041 H7C1D1 291 aa23.32■■□□□ 1.32
COL9A1-205ENST00000447041 WDR63Q8IWG1 891 aa23.32■■□□□ 1.32
COL9A1-205ENST00000447041 TTLL11Q8NHH1 800 aa23.32■■□□□ 1.32
COL9A1-205ENST00000447041 DPF2Q92785 391 aa23.32■■□□□ 1.32
COL9A1-205ENST00000447041 GREM2Q9H772 168 aa23.32■■□□□ 1.32
COL9A1-205ENST00000447041 PSME4Q14997 1843 aa23.31■■□□□ 1.32
COL9A1-205ENST00000447041 EGFRP00533 1210 aa23.31■■□□□ 1.32
COL9A1-205ENST00000447041 EXOSC9Q06265 439 aaKnown RBP23.31■■□□□ 1.32
COL9A1-205ENST00000447041 SAMD7Q7Z3H4 446 aa23.31■■□□□ 1.32
COL9A1-205ENST00000447041 UBE3BQ7Z3V4 1068 aa23.31■■□□□ 1.32
COL9A1-205ENST00000447041 ZC3H15Q8WU90 426 aaKnown RBP23.31■■□□□ 1.32
COL9A1-205ENST00000447041 SPINK5Q9NQ38 1064 aaPredicted RBP23.31■■□□□ 1.32
COL9A1-205ENST00000447041 XDHP47989 1333 aa23.31■■□□□ 1.32
COL9A1-205ENST00000447041 CACNA1FO60840 1977 aa23.31■■□□□ 1.32
COL9A1-205ENST00000447041 VAMP4O75379 141 aa23.3■■□□□ 1.32
COL9A1-205ENST00000447041 FKBP5Q13451 457 aaPredicted RBP23.3■■□□□ 1.32
COL9A1-205ENST00000447041 PAXIP1Q6ZW49 1069 aaPredicted RBP23.3■■□□□ 1.32
COL9A1-205ENST00000447041 CDC5LQ99459 802 aaKnown RBP23.3■■□□□ 1.32
COL9A1-205ENST00000447041 TLL2Q9Y6L7 1015 aa23.3■■□□□ 1.32
COL9A1-205ENST00000447041 H7C1W4 665 aa23.29■■□□□ 1.32
COL9A1-205ENST00000447041 CELF2O95319 508 aaKnown RBP23.29■■□□□ 1.32
COL9A1-205ENST00000447041 RPS12P25398 132 aaKnown RBP23.29■■□□□ 1.32
COL9A1-205ENST00000447041 TBC1D10BQ4KMP7 808 aaPredicted RBP23.29■■□□□ 1.32
COL9A1-205ENST00000447041 CYP4F22Q6NT55 531 aa23.29■■□□□ 1.32
COL9A1-205ENST00000447041 FAM9BQ8IZU0 186 aa23.29■■□□□ 1.32
COL9A1-205ENST00000447041 WBP1LQ9NX94 342 aa23.29■■□□□ 1.32
COL9A1-205ENST00000447041 GRM1Q13255 1194 aa23.28■■□□□ 1.32
COL9A1-205ENST00000447041 GCKRQ14397 625 aa23.28■■□□□ 1.32
COL9A1-205ENST00000447041 DNAAF4Q8WXU2 420 aa23.28■■□□□ 1.32
COL9A1-205ENST00000447041 AIDAQ96BJ3 306 aa23.28■■□□□ 1.32
COL9A1-205ENST00000447041 CAPNS2Q96L46 248 aa23.28■■□□□ 1.32
COL9A1-205ENST00000447041 ZNF408Q9H9D4 720 aa23.28■■□□□ 1.32
COL9A1-205ENST00000447041 WTIPA6NIX2 430 aaPredicted RBP23.27■■□□□ 1.32
COL9A1-205ENST00000447041 G3V3G9 751 aa23.27■■□□□ 1.32
COL9A1-205ENST00000447041 DCAF8Q5TAQ9 597 aa23.27■■□□□ 1.32
COL9A1-205ENST00000447041 VIL1P09327 827 aaKnown RBP23.26■■□□□ 1.31
COL9A1-205ENST00000447041 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
COL9A1-205ENST00000447041 CASP7P55210 303 aa23.26■■□□□ 1.31
COL9A1-205ENST00000447041 DLK2Q6UY11 383 aa23.26■■□□□ 1.31
COL9A1-205ENST00000447041 CDC37L1Q7L3B6 337 aa23.26■■□□□ 1.31
COL9A1-205ENST00000447041 BSDC1Q9NW68 430 aaPredicted RBP23.26■■□□□ 1.31
COL9A1-205ENST00000447041 CAPN15O75808 1086 aa23.25■■□□□ 1.31
COL9A1-205ENST00000447041 CTCFP49711 727 aaPredicted RBP23.25■■□□□ 1.31
COL9A1-205ENST00000447041 RBM26Q5T8P6 1007 aaKnown RBP23.25■■□□□ 1.31
COL9A1-205ENST00000447041 SAPCD2Q86UD0 394 aa23.25■■□□□ 1.31
COL9A1-205ENST00000447041 USP48Q86UV5 1035 aa23.25■■□□□ 1.31
COL9A1-205ENST00000447041 MYH16Q9H6N6 1097 aa23.25■■□□□ 1.31
COL9A1-205ENST00000447041 MINPP1Q9UNW1 487 aa23.25■■□□□ 1.31
COL9A1-205ENST00000447041 ZNF609O15014 1411 aa23.25■■□□□ 1.31
COL9A1-205ENST00000447041 ZNF646O15015 1829 aaPredicted RBP23.24■■□□□ 1.31
COL9A1-205ENST00000447041 ECE1P42892 770 aa23.24■■□□□ 1.31
COL9A1-205ENST00000447041 FAM161AQ3B820 660 aa23.24■■□□□ 1.31
COL9A1-205ENST00000447041 LINS1Q8NG48 757 aa23.24■■□□□ 1.31
COL9A1-205ENST00000447041 PLA2G12BQ9BX93 195 aa23.24■■□□□ 1.31
COL9A1-205ENST00000447041 MED23Q9ULK4 1368 aa23.24■■□□□ 1.31
COL9A1-205ENST00000447041 KIF4BQ2VIQ3 1234 aa23.23■■□□□ 1.31
COL9A1-205ENST00000447041 F6X3S4 739 aa23.22■■□□□ 1.31
COL9A1-205ENST00000447041 ITGA6P23229 1130 aa23.22■■□□□ 1.31
COL9A1-205ENST00000447041 MAP2K1Q02750 393 aaPredicted RBP23.22■■□□□ 1.31
COL9A1-205ENST00000447041 RSBN1LQ6PCB5 846 aaPredicted RBP23.22■■□□□ 1.31
COL9A1-205ENST00000447041 PRDM10Q9NQV6 1147 aa23.22■■□□□ 1.31
COL9A1-205ENST00000447041 POLR2AP24928 1970 aaKnown RBP23.21■■□□□ 1.31
COL9A1-205ENST00000447041 ADM5C9JUS6 153 aa23.21■■□□□ 1.31
COL9A1-205ENST00000447041 AOC2O75106 756 aa23.21■■□□□ 1.31
COL9A1-205ENST00000447041 HSPA8P11142 646 aaKnown RBP23.21■■□□□ 1.31
COL9A1-205ENST00000447041 IGHMBP2P38935 993 aaKnown RBP23.21■■□□□ 1.31
COL9A1-205ENST00000447041 CCT4P50991 539 aaKnown RBP23.21■■□□□ 1.31
COL9A1-205ENST00000447041 LBX1P52954 281 aa23.21■■□□□ 1.31
COL9A1-205ENST00000447041 KRT26Q7Z3Y9 468 aa23.21■■□□□ 1.31
COL9A1-205ENST00000447041 ASTN2O75129 1339 aaPredicted RBP23.21■■□□□ 1.31
COL9A1-205ENST00000447041 A0A1B0GUL6 1792 aa23.2■■□□□ 1.3
COL9A1-205ENST00000447041 AGBL3Q8NEM8 1001 aa23.2■■□□□ 1.3
COL9A1-205ENST00000447041 GGA3Q9NZ52 723 aa23.2■■□□□ 1.3
COL9A1-205ENST00000447041 CSF1RP07333 972 aa23.19■■□□□ 1.3
COL9A1-205ENST00000447041 PODNQ7Z5L7 613 aa23.19■■□□□ 1.3
COL9A1-205ENST00000447041 DCPSQ96C86 337 aaKnown RBP23.19■■□□□ 1.3
COL9A1-205ENST00000447041 USP17L3A6NCW0 530 aa23.18■■□□□ 1.3
COL9A1-205ENST00000447041 USP17L4A6NCW7 530 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms