RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SMIM5Q71RC9 77 aa11.42□□□□□ -0.58
COL6A4P1-201ENST00000446690 ZNF609O15014 1411 aa11.42□□□□□ -0.58
COL6A4P1-201ENST00000446690 SH3TC1Q8TE82 1336 aa11.42□□□□□ -0.58
COL6A4P1-201ENST00000446690 CUL4AQ13619 759 aa11.42□□□□□ -0.58
COL6A4P1-201ENST00000446690 ATP2B3Q16720 1220 aa11.42□□□□□ -0.58
COL6A4P1-201ENST00000446690 LINC00116Q8NCU8 138 aa11.42□□□□□ -0.58
COL6A4P1-201ENST00000446690 TTC14Q96N46 770 aa11.42□□□□□ -0.58
COL6A4P1-201ENST00000446690 LIMCH1Q9UPQ0 1083 aa11.42□□□□□ -0.58
COL6A4P1-201ENST00000446690 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 BAG4O95429 457 aaKnown RBP11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 RUFY3Q7L099 469 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 HELBQ8NG08 1087 aaPredicted RBP11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 MED23Q9ULK4 1368 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 NWD2Q9ULI1 1742 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 MCTP1Q6DN14 999 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 BICDL1Q6ZP65 573 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 KCNB2Q92953 911 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 INTS4Q96HW7 963 aaKnown RBP11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 TAF6LQ9Y6J9 622 aa11.41□□□□□ -0.58
COL6A4P1-201ENST00000446690 SPATA31A6Q5VVP1 1343 aa11.4□□□□□ -0.58
COL6A4P1-201ENST00000446690 PSMA5P28066 241 aa11.4□□□□□ -0.58
COL6A4P1-201ENST00000446690 SCARF1Q14162 830 aa11.4□□□□□ -0.58
COL6A4P1-201ENST00000446690 VPS53Q5VIR6 699 aa11.4□□□□□ -0.58
COL6A4P1-201ENST00000446690 TCEANC2Q96MN5 208 aa11.4□□□□□ -0.58
COL6A4P1-201ENST00000446690 TM6SF1Q9BZW5 370 aa11.4□□□□□ -0.58
COL6A4P1-201ENST00000446690 BRPF3Q9ULD4 1205 aa11.4□□□□□ -0.58
COL6A4P1-201ENST00000446690 ZNF652Q9Y2D9 606 aa11.4□□□□□ -0.58
COL6A4P1-201ENST00000446690 CYP2E1P05181 493 aaPredicted RBP11.4□□□□□ -0.59
COL6A4P1-201ENST00000446690 PARP10Q53GL7 1025 aa11.4□□□□□ -0.59
COL6A4P1-201ENST00000446690 BLOC1S2Q6QNY1 142 aa11.4□□□□□ -0.59
COL6A4P1-201ENST00000446690 PI16Q6UXB8 463 aa11.4□□□□□ -0.59
COL6A4P1-201ENST00000446690 MPHOSPH8Q99549 860 aa11.4□□□□□ -0.59
COL6A4P1-201ENST00000446690 SEC31BQ9NQW1 1179 aa11.4□□□□□ -0.59
COL6A4P1-201ENST00000446690 ZDHHC9Q9Y397 364 aa11.4□□□□□ -0.59
COL6A4P1-201ENST00000446690 RNF113AO15541 343 aaKnown RBP11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 DTNBO60941 627 aa11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 PDE8BO95263 885 aa11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 HSPA1LP34931 641 aa11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 ZAP70P43403 619 aa11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 COL9A3Q14050 684 aaPredicted RBP11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 WASHC4Q2M389 1173 aa11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 HELLSQ9NRZ9 838 aa11.39□□□□□ -0.59
COL6A4P1-201ENST00000446690 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 CHAMP1Q96JM3 812 aa11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 RFX7Q2KHR2 1363 aa11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 LARGE1O95461 756 aa11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 FOXD4L6Q3SYB3 417 aaPredicted RBP11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 ZMYM1Q5SVZ6 1142 aa11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 FOXD4L3Q6VB84 417 aaPredicted RBP11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 CCDC83Q8IWF9 413 aa11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 GJD4Q96KN9 370 aaPredicted RBP11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 AK7Q96M32 723 aa11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 HMG20BQ9P0W2 317 aa11.38□□□□□ -0.59
COL6A4P1-201ENST00000446690 SNAP23O00161 211 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 NTSR2O95665 410 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 AEBP2Q6ZN18 517 aaPredicted RBP11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 M0R2C6 588 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 PTMSP20962 102 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 LRRFIP1Q32MZ4 808 aaKnown RBP11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 USPL1Q5W0Q7 1092 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 CLEC17AQ6ZS10 378 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 VGLL2Q8N8G2 317 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 NECAB1Q8N987 351 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 CCNL1Q9UK58 526 aaPredicted RBP11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 TPCN1Q9ULQ1 816 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 SMC3Q9UQE7 1217 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 MROH5Q6ZUA9 1318 aa11.37□□□□□ -0.59
COL6A4P1-201ENST00000446690 NUP98P52948 1817 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 CYP21A2P08686 494 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 HSP90B1P14625 803 aaKnown RBP11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 NCLP19338 710 aaKnown RBP11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 RPS6KB1P23443 525 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 IGHMBP2P38935 993 aaKnown RBP11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 MCAMP43121 646 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 PUM3Q15397 648 aaKnown RBP11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 ME3Q16798 604 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 ERFEQ4G0M1 354 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 OSBP2Q969R2 916 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 NEK1Q96PY6 1258 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 MAST3O60307 1309 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 AFF2P51816 1311 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 GNPATO15228 680 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 PRPF40AO75400 957 aaKnown RBP11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 BRD1O95696 1058 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 HSPD1P10809 573 aaKnown RBP11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 PHKA1P46020 1223 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 KRT32Q14532 448 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 SKOR2Q2VWA4 1001 aaPredicted RBP11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 CCDC102BQ68D86 513 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 CLEC4GQ6UXB4 293 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 LPIN2Q92539 896 aa11.36□□□□□ -0.59
COL6A4P1-201ENST00000446690 ZSCAN31Q96LW9 406 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms