RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 BSDC1Q9NW68 430 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-203ENST00000446553 GGA1Q9UJY5 639 aa14.4□□□□□ -0.1
CDCA3-203ENST00000446553 SALL2Q9Y467 1007 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-203ENST00000446553 ZNF609O15014 1411 aa14.4□□□□□ -0.1
CDCA3-203ENST00000446553 XDHP47989 1333 aa14.4□□□□□ -0.1
CDCA3-203ENST00000446553 RAD17O75943 681 aa14.39□□□□□ -0.11
CDCA3-203ENST00000446553 CASP7P55210 303 aa14.39□□□□□ -0.11
CDCA3-203ENST00000446553 BCL2L13Q9BXK5 485 aa14.39□□□□□ -0.11
CDCA3-203ENST00000446553 ANKIB1Q9P2G1 1089 aa14.39□□□□□ -0.11
CDCA3-203ENST00000446553 TRPM7Q96QT4 1865 aa14.38□□□□□ -0.11
CDCA3-203ENST00000446553 UFL1O94874 794 aa14.38□□□□□ -0.11
CDCA3-203ENST00000446553 CSF1RP07333 972 aa14.38□□□□□ -0.11
CDCA3-203ENST00000446553 ATP2B4P23634 1241 aa14.38□□□□□ -0.11
CDCA3-203ENST00000446553 UBE3BQ7Z3V4 1068 aa14.38□□□□□ -0.11
CDCA3-203ENST00000446553 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-203ENST00000446553 CNOT7Q9UIV1 285 aaKnown RBP14.38□□□□□ -0.11
CDCA3-203ENST00000446553 PSME4Q14997 1843 aa14.37□□□□□ -0.11
CDCA3-203ENST00000446553 RASSF10A6NK89 507 aa14.37□□□□□ -0.11
CDCA3-203ENST00000446553 H7C1D1 291 aa14.37□□□□□ -0.11
CDCA3-203ENST00000446553 PSMD14O00487 310 aa14.37□□□□□ -0.11
CDCA3-203ENST00000446553 ECE2O60344 883 aa14.37□□□□□ -0.11
CDCA3-203ENST00000446553 VIL1P09327 827 aaKnown RBP14.37□□□□□ -0.11
CDCA3-203ENST00000446553 GREM2Q9H772 168 aa14.37□□□□□ -0.11
CDCA3-203ENST00000446553 DBNDD1Q9H9R9 158 aa14.37□□□□□ -0.11
CDCA3-203ENST00000446553 SCN9AQ15858 1988 aa14.36□□□□□ -0.11
CDCA3-203ENST00000446553 BEND3Q5T5X7 828 aa14.36□□□□□ -0.11
CDCA3-203ENST00000446553 IFFO2Q5TF58 517 aa14.36□□□□□ -0.11
CDCA3-203ENST00000446553 MINPP1Q9UNW1 487 aa14.36□□□□□ -0.11
CDCA3-203ENST00000446553 MED23Q9ULK4 1368 aa14.35□□□□□ -0.11
CDCA3-203ENST00000446553 E9PSI1 815 aa14.35□□□□□ -0.11
CDCA3-203ENST00000446553 RIMBP2O15034 1052 aa14.35□□□□□ -0.11
CDCA3-203ENST00000446553 IGHMBP2P38935 993 aaKnown RBP14.35□□□□□ -0.11
CDCA3-203ENST00000446553 PODNQ7Z5L7 613 aa14.35□□□□□ -0.11
CDCA3-203ENST00000446553 MICALL2Q8IY33 904 aa14.35□□□□□ -0.11
CDCA3-203ENST00000446553 CCDC85AQ96PX6 553 aaPredicted RBP14.35□□□□□ -0.11
CDCA3-203ENST00000446553 MKRN1Q9UHC7 482 aaKnown RBP14.35□□□□□ -0.11
CDCA3-203ENST00000446553 ALDH1L1O75891 902 aa14.34□□□□□ -0.11
CDCA3-203ENST00000446553 ITGA6P23229 1130 aa14.34□□□□□ -0.11
CDCA3-203ENST00000446553 HIRAP54198 1017 aaPredicted RBP14.34□□□□□ -0.11
CDCA3-203ENST00000446553 DOK7Q18PE1 504 aa14.34□□□□□ -0.11
CDCA3-203ENST00000446553 DEFB115Q30KQ5 88 aa14.34□□□□□ -0.11
CDCA3-203ENST00000446553 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
CDCA3-203ENST00000446553 LEMD3Q9Y2U8 911 aa14.34□□□□□ -0.11
CDCA3-203ENST00000446553 G3V3G9 751 aa14.33□□□□□ -0.12
CDCA3-203ENST00000446553 CCER2I3L3R5 266 aa14.33□□□□□ -0.12
CDCA3-203ENST00000446553 HSPA1AP0DMV8 641 aaKnown RBP14.33□□□□□ -0.12
CDCA3-203ENST00000446553 HSPA1BP0DMV9 641 aaKnown RBP14.33□□□□□ -0.12
CDCA3-203ENST00000446553 MMP14P50281 582 aa14.33□□□□□ -0.12
CDCA3-203ENST00000446553 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
CDCA3-203ENST00000446553 DCAF8Q5TAQ9 597 aa14.33□□□□□ -0.12
CDCA3-203ENST00000446553 CDC37L1Q7L3B6 337 aa14.33□□□□□ -0.12
CDCA3-203ENST00000446553 TRPM4Q8TD43 1214 aa14.33□□□□□ -0.12
CDCA3-203ENST00000446553 HHIPL1Q96JK4 782 aa14.33□□□□□ -0.12
CDCA3-203ENST00000446553 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.12
CDCA3-203ENST00000446553 ZBTB12Q9Y330 459 aaPredicted RBP14.33□□□□□ -0.12
CDCA3-203ENST00000446553 F6X3S4 739 aa14.32□□□□□ -0.12
CDCA3-203ENST00000446553 VEGFBP49765 207 aa14.32□□□□□ -0.12
CDCA3-203ENST00000446553 CST9Q5W186 159 aa14.32□□□□□ -0.12
CDCA3-203ENST00000446553 GPR101Q96P66 508 aaPredicted RBP14.32□□□□□ -0.12
CDCA3-203ENST00000446553 MPHOSPH8Q99549 860 aa14.32□□□□□ -0.12
CDCA3-203ENST00000446553 KCNQ5Q9NR82 932 aa14.32□□□□□ -0.12
CDCA3-203ENST00000446553 SPEF2Q9C093 1822 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 ANKRD18BA2A2Z9 1011 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 GRM8O00222 908 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 ZNF280AP59817 542 aaPredicted RBP14.31□□□□□ -0.12
CDCA3-203ENST00000446553 FOXO4P98177 505 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 FAM161AQ3B820 660 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 RSBN1LQ6PCB5 846 aaPredicted RBP14.31□□□□□ -0.12
CDCA3-203ENST00000446553 GMLQ99445 158 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 SRCIN1Q9C0H9 1055 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 COA1Q9GZY4 146 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
CDCA3-203ENST00000446553 TLL2Q9Y6L7 1015 aa14.31□□□□□ -0.12
CDCA3-203ENST00000446553 POLR2AP24928 1970 aaKnown RBP14.31□□□□□ -0.12
CDCA3-203ENST00000446553 USP17L3A6NCW0 530 aa14.3□□□□□ -0.12
CDCA3-203ENST00000446553 USP17L4A6NCW7 530 aa14.3□□□□□ -0.12
CDCA3-203ENST00000446553 TRAF5O00463 557 aa14.3□□□□□ -0.12
CDCA3-203ENST00000446553 ECE1P42892 770 aa14.3□□□□□ -0.12
CDCA3-203ENST00000446553 SLFN5Q08AF3 891 aa14.3□□□□□ -0.12
CDCA3-203ENST00000446553 IFIT5Q13325 482 aaKnown RBP14.3□□□□□ -0.12
CDCA3-203ENST00000446553 C15orf52Q6ZUT6 534 aaKnown RBP14.3□□□□□ -0.12
CDCA3-203ENST00000446553 USP17L1Q7RTZ2 530 aa14.3□□□□□ -0.12
CDCA3-203ENST00000446553 PTPRCP08575 1304 aa14.3□□□□□ -0.12
CDCA3-203ENST00000446553 THSD7BQ9C0I4 1608 aa14.3□□□□□ -0.12
CDCA3-203ENST00000446553 SHTN1A0MZ66 631 aa14.29□□□□□ -0.12
CDCA3-203ENST00000446553 CT47B1P0C2W7 299 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-203ENST00000446553 STRIP1Q5VSL9 837 aa14.29□□□□□ -0.12
CDCA3-203ENST00000446553 SAMD7Q7Z3H4 446 aa14.29□□□□□ -0.12
CDCA3-203ENST00000446553 SAPCD2Q86UD0 394 aa14.29□□□□□ -0.12
CDCA3-203ENST00000446553 TRMT2AQ8IZ69 625 aaKnown RBP14.29□□□□□ -0.12
CDCA3-203ENST00000446553 GLIS2Q9BZE0 524 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-203ENST00000446553 WBP1LQ9NX94 342 aa14.29□□□□□ -0.12
CDCA3-203ENST00000446553 ZNF804BA4D1E1 1349 aa14.29□□□□□ -0.12
CDCA3-203ENST00000446553 UTYO14607 1347 aa14.29□□□□□ -0.12
CDCA3-203ENST00000446553 MYO3BQ8WXR4 1341 aa14.29□□□□□ -0.12
CDCA3-203ENST00000446553 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
CDCA3-203ENST00000446553 CELF2O95319 508 aaKnown RBP14.28□□□□□ -0.12
CDCA3-203ENST00000446553 MAP2K1Q02750 393 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-203ENST00000446553 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDCA3-203ENST00000446553 CHRNDQ07001 517 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms