RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 NLRP3Q96P20 1036 aa13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 RRP7AQ9Y3A4 280 aaKnown RBP13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 POLR2AP24928 1970 aaKnown RBP13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 G3V3G9 751 aa13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 U2AF1L5P0DN76 240 aaPredicted RBP13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 U2AF1Q01081 240 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 PARP10Q53GL7 1025 aa13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 KDM3BQ7LBC6 1761 aa13.11□□□□□ -0.31
UBE2D4-206ENST00000446008 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 BBOX1O75936 387 aa13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 EIF4A1P60842 406 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 KIAA2012Q0VF49 1180 aa13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 TNIP1Q15025 636 aa13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 ZIC5Q96T25 663 aa13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 ABCC4O15439 1325 aa13.1□□□□□ -0.31
UBE2D4-206ENST00000446008 MYL6BP14649 208 aa13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 CNGB1Q14028 1251 aaPredicted RBP13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 CNOT7Q9UIV1 285 aaKnown RBP13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 ANKRD36CQ5JPF3 1778 aa13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
UBE2D4-206ENST00000446008 AKAP11Q9UKA4 1901 aa13.08□□□□□ -0.32
UBE2D4-206ENST00000446008 HUNKP57058 714 aa13.08□□□□□ -0.32
UBE2D4-206ENST00000446008 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.32
UBE2D4-206ENST00000446008 MPNDQ8N594 471 aa13.08□□□□□ -0.32
UBE2D4-206ENST00000446008 SAGE1Q9NXZ1 904 aa13.08□□□□□ -0.32
UBE2D4-206ENST00000446008 LAMB2P55268 1798 aa13.07□□□□□ -0.32
UBE2D4-206ENST00000446008 FAM155AB1AL88 458 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-206ENST00000446008 H7C1D1 291 aa13.07□□□□□ -0.32
UBE2D4-206ENST00000446008 RAD17O75943 681 aa13.07□□□□□ -0.32
UBE2D4-206ENST00000446008 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
UBE2D4-206ENST00000446008 DPF2Q92785 391 aa13.07□□□□□ -0.32
UBE2D4-206ENST00000446008 UTP14AQ9BVJ6 771 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-206ENST00000446008 YDJCA8MPS7 323 aa13.06□□□□□ -0.32
UBE2D4-206ENST00000446008 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
UBE2D4-206ENST00000446008 RGMBQ6NW40 437 aa13.06□□□□□ -0.32
UBE2D4-206ENST00000446008 LRP10Q7Z4F1 713 aa13.06□□□□□ -0.32
UBE2D4-206ENST00000446008 CCDC102AQ96A19 550 aa13.05□□□□□ -0.32
UBE2D4-206ENST00000446008 TAF1P21675 1872 aa13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 SHTN1A0MZ66 631 aa13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 KIF23Q02241 960 aaPredicted RBP13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 GRAPQ13588 217 aa13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 PDIA6Q15084 440 aa13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 DDX46Q7L014 1031 aaKnown RBP13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 TMC4Q7Z404 712 aa13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 GRAPLQ8TC17 118 aaPredicted RBP13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 GBA2Q9HCG7 927 aaPredicted RBP13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 RNF186Q9NXI6 227 aa13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
UBE2D4-206ENST00000446008 NEFMP07197 916 aa13.03□□□□□ -0.32
UBE2D4-206ENST00000446008 DLK2Q6UY11 383 aa13.03□□□□□ -0.32
UBE2D4-206ENST00000446008 KRT26Q7Z3Y9 468 aa13.03□□□□□ -0.32
UBE2D4-206ENST00000446008 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
UBE2D4-206ENST00000446008 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.32
UBE2D4-206ENST00000446008 PSMD14O00487 310 aa13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 TRPA1O75762 1119 aa13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 RPS12P25398 132 aaKnown RBP13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 ZNF157P51786 506 aaPredicted RBP13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 SOX10P56693 466 aa13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 SAMD7Q7Z3H4 446 aa13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 NLRP10Q86W26 655 aa13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 CSRNP1Q96S65 589 aa13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 RYDENQ9NUL5 291 aaKnown RBP13.02□□□□□ -0.33
UBE2D4-206ENST00000446008 SLC10A3P09131 477 aa13.01□□□□□ -0.33
UBE2D4-206ENST00000446008 HCLS1P14317 486 aaPredicted RBP13.01□□□□□ -0.33
UBE2D4-206ENST00000446008 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
UBE2D4-206ENST00000446008 TBC1D10BQ4KMP7 808 aaPredicted RBP13.01□□□□□ -0.33
UBE2D4-206ENST00000446008 CTU1Q7Z7A3 348 aaKnown RBP13.01□□□□□ -0.33
UBE2D4-206ENST00000446008 CCER1Q8TC90 406 aaPredicted RBP13.01□□□□□ -0.33
UBE2D4-206ENST00000446008 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
UBE2D4-206ENST00000446008 EGFRP00533 1210 aa13□□□□□ -0.33
UBE2D4-206ENST00000446008 TCIRG1Q13488 830 aa13□□□□□ -0.33
UBE2D4-206ENST00000446008 WASHC4Q2M389 1173 aa13□□□□□ -0.33
UBE2D4-206ENST00000446008 BBXQ8WY36 941 aaPredicted RBP13□□□□□ -0.33
UBE2D4-206ENST00000446008 TRMT112Q9UI30 125 aaKnown RBP13□□□□□ -0.33
UBE2D4-206ENST00000446008 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
UBE2D4-206ENST00000446008 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
UBE2D4-206ENST00000446008 PROSER3Q2NL68 480 aa12.99□□□□□ -0.33
UBE2D4-206ENST00000446008 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
UBE2D4-206ENST00000446008 TMEM121BQ9BXQ6 578 aaPredicted RBP12.99□□□□□ -0.33
UBE2D4-206ENST00000446008 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
UBE2D4-206ENST00000446008 PPP1R37O75864 691 aa12.98□□□□□ -0.33
UBE2D4-206ENST00000446008 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
UBE2D4-206ENST00000446008 DBNDD1Q9H9R9 158 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms