RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 ANKRD13DQ6ZTN6 518 aa30.94■■■□□ 2.54
NUP50-211ENST00000445721 SULF1Q8IWU6 871 aa30.94■■■□□ 2.54
NUP50-211ENST00000445721 SOX10P56693 466 aa30.93■■■□□ 2.54
NUP50-211ENST00000445721 ISCA1Q9BUE6 129 aa30.93■■■□□ 2.54
NUP50-211ENST00000445721 TBC1D16Q8TBP0 767 aa30.92■■■□□ 2.54
NUP50-211ENST00000445721 GGA3Q9NZ52 723 aa30.92■■■□□ 2.54
NUP50-211ENST00000445721 LAS1LQ9Y4W2 734 aaKnown RBP30.92■■■□□ 2.54
NUP50-211ENST00000445721 DDX60Q8IY21 1712 aaKnown RBP30.92■■■□□ 2.54
NUP50-211ENST00000445721 CHL1O00533 1208 aa30.91■■■□□ 2.54
NUP50-211ENST00000445721 NEUROD2Q15784 382 aa30.91■■■□□ 2.54
NUP50-211ENST00000445721 SLC10A3P09131 477 aa30.9■■■□□ 2.54
NUP50-211ENST00000445721 VIL1P09327 827 aaKnown RBP30.9■■■□□ 2.54
NUP50-211ENST00000445721 RPS8P62241 208 aaKnown RBP30.9■■■□□ 2.54
NUP50-211ENST00000445721 HDGFL1Q5TGJ6 251 aa30.9■■■□□ 2.54
NUP50-211ENST00000445721 CSRNP1Q96S65 589 aa30.9■■■□□ 2.54
NUP50-211ENST00000445721 ZC3H12CQ9C0D7 883 aaKnown RBP30.9■■■□□ 2.54
NUP50-211ENST00000445721 ASTN2O75129 1339 aaPredicted RBP30.9■■■□□ 2.54
NUP50-211ENST00000445721 G3V3G9 751 aa30.89■■■□□ 2.54
NUP50-211ENST00000445721 IRS4O14654 1257 aaPredicted RBP30.89■■■□□ 2.54
NUP50-211ENST00000445721 DCAF8Q5TAQ9 597 aa30.89■■■□□ 2.54
NUP50-211ENST00000445721 CDCA5Q96FF9 252 aa30.88■■■□□ 2.53
NUP50-211ENST00000445721 COL4A1P02462 1669 aa30.87■■■□□ 2.53
NUP50-211ENST00000445721 AKAP11Q9UKA4 1901 aa30.86■■■□□ 2.53
NUP50-211ENST00000445721 DBF4Q9UBU7 674 aaPredicted RBP30.86■■■□□ 2.53
NUP50-211ENST00000445721 UFL1O94874 794 aa30.85■■■□□ 2.53
NUP50-211ENST00000445721 CTU1Q7Z7A3 348 aaKnown RBP30.85■■■□□ 2.53
NUP50-211ENST00000445721 SCARF1Q14162 830 aa30.84■■■□□ 2.53
NUP50-211ENST00000445721 ANKIB1Q9P2G1 1089 aa30.84■■■□□ 2.53
NUP50-211ENST00000445721 SCN9AQ15858 1988 aa30.83■■■□□ 2.53
NUP50-211ENST00000445721 TRIM28Q13263 835 aaKnown RBP30.83■■■□□ 2.53
NUP50-211ENST00000445721 ANGEL2Q5VTE6 544 aaKnown RBP30.83■■■□□ 2.53
NUP50-211ENST00000445721 CCDC146Q8IYE0 955 aa30.83■■■□□ 2.53
NUP50-211ENST00000445721 SEC31BQ9NQW1 1179 aa30.83■■■□□ 2.53
NUP50-211ENST00000445721 PODXL2Q9NZ53 605 aa30.83■■■□□ 2.53
NUP50-211ENST00000445721 ZNF280AP59817 542 aaPredicted RBP30.82■■■□□ 2.52
NUP50-211ENST00000445721 RASAL3Q86YV0 1011 aa30.82■■■□□ 2.52
NUP50-211ENST00000445721 HYPKQ9NX55 129 aa30.82■■■□□ 2.52
NUP50-211ENST00000445721 GGA1Q9UJY5 639 aa30.82■■■□□ 2.52
NUP50-211ENST00000445721 HOXB7P09629 217 aa30.81■■■□□ 2.52
NUP50-211ENST00000445721 REM2Q8IYK8 340 aaPredicted RBP30.81■■■□□ 2.52
NUP50-211ENST00000445721 RSBN1LQ6PCB5 846 aaPredicted RBP30.8■■■□□ 2.52
NUP50-211ENST00000445721 AGBL3Q8NEM8 1001 aa30.8■■■□□ 2.52
NUP50-211ENST00000445721 TRIM35Q9UPQ4 493 aa30.8■■■□□ 2.52
NUP50-211ENST00000445721 ZBTB38Q8NAP3 1195 aaPredicted RBP30.78■■■□□ 2.52
NUP50-211ENST00000445721 FKBP1BP68106 108 aa30.77■■■□□ 2.52
NUP50-211ENST00000445721 DUSP27Q5VZP5 1158 aa30.77■■■□□ 2.52
NUP50-211ENST00000445721 RIC3Q7Z5B4 369 aa30.77■■■□□ 2.52
NUP50-211ENST00000445721 USP17L8P0C7I0 530 aa30.76■■■□□ 2.51
NUP50-211ENST00000445721 HSP90B1P14625 803 aaKnown RBP30.76■■■□□ 2.51
NUP50-211ENST00000445721 RALBP1Q15311 655 aa30.75■■■□□ 2.51
NUP50-211ENST00000445721 MOB2Q70IA6 237 aa30.75■■■□□ 2.51
NUP50-211ENST00000445721 MYOZ2Q9NPC6 264 aa30.75■■■□□ 2.51
NUP50-211ENST00000445721 SCAF8Q9UPN6 1271 aaKnown RBP30.75■■■□□ 2.51
NUP50-211ENST00000445721 HPS5Q9UPZ3 1129 aa30.75■■■□□ 2.51
NUP50-211ENST00000445721 CCDC152Q4G0S7 254 aa30.74■■■□□ 2.51
NUP50-211ENST00000445721 CCDC85AQ96PX6 553 aaPredicted RBP30.74■■■□□ 2.51
NUP50-211ENST00000445721 GMLQ99445 158 aa30.74■■■□□ 2.51
NUP50-211ENST00000445721 UBE2Q2LH0YL09 131 aa30.73■■■□□ 2.51
NUP50-211ENST00000445721 GOLGA2Q08379 1002 aa30.73■■■□□ 2.51
NUP50-211ENST00000445721 HDAC9Q9UKV0 1011 aa30.73■■■□□ 2.51
NUP50-211ENST00000445721 PITPNM2Q9BZ72 1349 aa30.73■■■□□ 2.51
NUP50-211ENST00000445721 PRPF38BQ5VTL8 546 aaKnown RBP30.72■■■□□ 2.51
NUP50-211ENST00000445721 JARID2Q92833 1246 aaPredicted RBP30.72■■■□□ 2.51
NUP50-211ENST00000445721 RUNDC1Q96C34 613 aa30.72■■■□□ 2.51
NUP50-211ENST00000445721 ZNF609O15014 1411 aa30.72■■■□□ 2.51
NUP50-211ENST00000445721 USP17L3A6NCW0 530 aa30.71■■■□□ 2.51
NUP50-211ENST00000445721 USP17L4A6NCW7 530 aa30.71■■■□□ 2.51
NUP50-211ENST00000445721 TBC1D8O95759 1140 aa30.71■■■□□ 2.51
NUP50-211ENST00000445721 PRAMEF18Q5VWM3 479 aa30.71■■■□□ 2.51
NUP50-211ENST00000445721 USP17L1Q7RTZ2 530 aa30.71■■■□□ 2.51
NUP50-211ENST00000445721 MYD88Q99836 296 aa30.71■■■□□ 2.51
NUP50-211ENST00000445721 PAPPA2Q9BXP8 1791 aa30.71■■■□□ 2.51
NUP50-211ENST00000445721 PKN2Q16513 984 aaKnown RBP30.7■■■□□ 2.51
NUP50-211ENST00000445721 ZNF296Q8WUU4 475 aaPredicted RBP30.7■■■□□ 2.51
NUP50-211ENST00000445721 PHAXQ9H814 394 aaKnown RBP30.7■■■□□ 2.51
NUP50-211ENST00000445721 XDHP47989 1333 aa30.7■■■□□ 2.5
NUP50-211ENST00000445721 PDE8AO60658 829 aa30.69■■■□□ 2.5
NUP50-211ENST00000445721 ANKRD18AQ8IVF6 992 aa30.69■■■□□ 2.5
NUP50-211ENST00000445721 PCCAP05165 728 aaPredicted RBP30.68■■■□□ 2.5
NUP50-211ENST00000445721 ATP2B4P23634 1241 aa30.68■■■□□ 2.5
NUP50-211ENST00000445721 TTLL12Q14166 644 aaPredicted RBP30.68■■■□□ 2.5
NUP50-211ENST00000445721 PODNQ7Z5L7 613 aa30.68■■■□□ 2.5
NUP50-211ENST00000445721 CCDC191Q8NCU4 936 aa30.68■■■□□ 2.5
NUP50-211ENST00000445721 MBIPQ9NS73 344 aa30.67■■■□□ 2.5
NUP50-211ENST00000445721 NBPF9Q3BBW0 867 aa30.66■■■□□ 2.5
NUP50-211ENST00000445721 CWC25Q9NXE8 425 aaPredicted RBP30.66■■■□□ 2.5
NUP50-211ENST00000445721 WDR43Q15061 677 aaKnown RBP eCLIP30.65■■■□□ 2.5
NUP50-211ENST00000445721 WTIPA6NIX2 430 aaPredicted RBP30.64■■■□□ 2.5
NUP50-211ENST00000445721 MKRN3Q13064 507 aaKnown RBP30.64■■■□□ 2.5
NUP50-211ENST00000445721 PSME4Q14997 1843 aa30.63■■■□□ 2.49
NUP50-211ENST00000445721 ELL2O00472 640 aaPredicted RBP30.63■■■□□ 2.49
NUP50-211ENST00000445721 TM4SF4P48230 202 aa30.63■■■□□ 2.49
NUP50-211ENST00000445721 MXD3Q9BW11 206 aa30.63■■■□□ 2.49
NUP50-211ENST00000445721 GPR25O00155 361 aa30.62■■■□□ 2.49
NUP50-211ENST00000445721 OGFOD1Q8N543 542 aa30.62■■■□□ 2.49
NUP50-211ENST00000445721 ADAMTS8Q9UP79 889 aa30.62■■■□□ 2.49
NUP50-211ENST00000445721 NF2P35240 595 aa30.61■■■□□ 2.49
NUP50-211ENST00000445721 FBXW7Q969H0 707 aa30.61■■■□□ 2.49
NUP50-211ENST00000445721 CDC5LQ99459 802 aaKnown RBP30.6■■■□□ 2.49
NUP50-211ENST00000445721 MYBBP1AQ9BQG0 1328 aaKnown RBP30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms