RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 NHSL1Q5SYE7 1610 aa20.08■□□□□ 0.81
LAPTM4B-201ENST00000445593 FIBPO43427 364 aa20.08■□□□□ 0.8
LAPTM4B-201ENST00000445593 MCMDC2Q4G0Z9 681 aa20.08■□□□□ 0.8
LAPTM4B-201ENST00000445593 CHST3Q7LGC8 479 aa20.08■□□□□ 0.8
LAPTM4B-201ENST00000445593 XAGE2Q96GT9 111 aa20.08■□□□□ 0.8
LAPTM4B-201ENST00000445593 TAOK2Q9UL54 1235 aa20.08■□□□□ 0.8
LAPTM4B-201ENST00000445593 HSP90B1P14625 803 aaKnown RBP20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 ST3GAL1Q11201 340 aa20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 CNPY2Q9Y2B0 182 aa20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 PLEKHG2Q9H7P9 1386 aa20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 BCL9O00512 1426 aa20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 EPB41L2O43491 1005 aaKnown RBP20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 MRE11P49959 708 aa20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 ZSCAN23Q3MJ62 389 aa20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 RPAP1Q9BWH6 1393 aaPredicted RBP20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 PCCAP05165 728 aaPredicted RBP20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 PTMSP20962 102 aa20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 NAP1L5Q96NT1 182 aaPredicted RBP20.07■□□□□ 0.8
LAPTM4B-201ENST00000445593 SYCE3A1L190 88 aa20.06■□□□□ 0.8
LAPTM4B-201ENST00000445593 STX6O43752 255 aa20.06■□□□□ 0.8
LAPTM4B-201ENST00000445593 CYP21A2P08686 494 aa20.06■□□□□ 0.8
LAPTM4B-201ENST00000445593 FAM182BQ5T319 152 aa20.06■□□□□ 0.8
LAPTM4B-201ENST00000445593 WDR33Q9C0J8 1336 aaKnown RBP20.06■□□□□ 0.8
LAPTM4B-201ENST00000445593 FAM173BQ6P4H8 233 aa20.06■□□□□ 0.8
LAPTM4B-201ENST00000445593 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
LAPTM4B-201ENST00000445593 TMEM63CQ9P1W3 806 aa20.06■□□□□ 0.8
LAPTM4B-201ENST00000445593 PSMA5P28066 241 aa20.05■□□□□ 0.8
LAPTM4B-201ENST00000445593 HAND2P61296 217 aa20.05■□□□□ 0.8
LAPTM4B-201ENST00000445593 UBR2Q8IWV8 1755 aa20.05■□□□□ 0.8
LAPTM4B-201ENST00000445593 FAM98CQ17RN3 349 aaKnown RBP20.05■□□□□ 0.8
LAPTM4B-201ENST00000445593 CCDC158Q5M9N0 1113 aa20.05■□□□□ 0.8
LAPTM4B-201ENST00000445593 TTLL5Q6EMB2 1281 aa20.05■□□□□ 0.8
LAPTM4B-201ENST00000445593 ZAP70P43403 619 aa20.04■□□□□ 0.8
LAPTM4B-201ENST00000445593 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
LAPTM4B-201ENST00000445593 TTLL11Q8NHH1 800 aa20.04■□□□□ 0.8
LAPTM4B-201ENST00000445593 IL17RAQ96F46 866 aa20.04■□□□□ 0.8
LAPTM4B-201ENST00000445593 C8orf37Q96NL8 207 aa20.04■□□□□ 0.8
LAPTM4B-201ENST00000445593 UBN2Q6ZU65 1347 aa20.04■□□□□ 0.8
LAPTM4B-201ENST00000445593 RPS6KB1P23443 525 aa20.04■□□□□ 0.8
LAPTM4B-201ENST00000445593 HSP90AA2PQ14568 343 aaPredicted RBP20.04■□□□□ 0.8
LAPTM4B-201ENST00000445593 ATP2B3Q16720 1220 aa20.03■□□□□ 0.8
LAPTM4B-201ENST00000445593 RNF214Q8ND24 703 aa20.03■□□□□ 0.8
LAPTM4B-201ENST00000445593 DDX11Q96FC9 970 aa20.03■□□□□ 0.8
LAPTM4B-201ENST00000445593 M0R2C6 588 aa20.03■□□□□ 0.8
LAPTM4B-201ENST00000445593 ZSCAN22P10073 491 aaPredicted RBP20.03■□□□□ 0.8
LAPTM4B-201ENST00000445593 CTSWP56202 376 aa20.03■□□□□ 0.8
LAPTM4B-201ENST00000445593 NEK1Q96PY6 1258 aa20.03■□□□□ 0.8
LAPTM4B-201ENST00000445593 SPATA31A1Q5TZJ5 1347 aa20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 CRKLP46109 303 aaKnown RBP20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 TM6SF1Q9BZW5 370 aa20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 DISP2A7MBM2 1401 aa20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 TJP1Q07157 1748 aa20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 Q6ZUG5 572 aa20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 BRF1Q92994 677 aa20.02■□□□□ 0.8
LAPTM4B-201ENST00000445593 ANKRD18BA2A2Z9 1011 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 ITPK1Q13572 414 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 NUP188Q5SRE5 1749 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 MAST3O60307 1309 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 JAK2O60674 1132 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 DNM1Q05193 864 aaKnown RBP20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 LARP1BQ659C4 914 aaKnown RBP20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 OSBP2Q969R2 916 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 LOC102724428A0A0B4J2F2 783 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 SIK1P57059 783 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 SEC31BQ9NQW1 1179 aa20.01■□□□□ 0.79
LAPTM4B-201ENST00000445593 ITGB4P16144 1822 aa20■□□□□ 0.79
LAPTM4B-201ENST00000445593 PTF1AQ7RTS3 328 aa20■□□□□ 0.79
LAPTM4B-201ENST00000445593 RAB11FIP4Q86YS3 637 aa20■□□□□ 0.79
LAPTM4B-201ENST00000445593 KCNB2Q92953 911 aa20■□□□□ 0.79
LAPTM4B-201ENST00000445593 CIAO1O76071 339 aa20■□□□□ 0.79
LAPTM4B-201ENST00000445593 SUSD4Q5VX71 490 aa20■□□□□ 0.79
LAPTM4B-201ENST00000445593 TCHHQ07283 1943 aa20■□□□□ 0.79
LAPTM4B-201ENST00000445593 F13A1P00488 732 aa19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 NASPP49321 788 aaPredicted RBP19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 RNF113AO15541 343 aaKnown RBP19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 IDH1O75874 414 aaKnown RBP19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 HSPD1P10809 573 aaKnown RBP19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 TRIM28Q13263 835 aaKnown RBP19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 CDC37L1Q7L3B6 337 aa19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 ZSCAN31Q96LW9 406 aaPredicted RBP19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 AKAP2Q9Y2D5 859 aa19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 PAPPAQ13219 1627 aa19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 NGLY1Q96IV0 654 aa19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 SH2B1Q9NRF2 756 aaPredicted RBP19.99■□□□□ 0.79
LAPTM4B-201ENST00000445593 CSF1RP07333 972 aa19.98■□□□□ 0.79
LAPTM4B-201ENST00000445593 CCT2P78371 535 aaKnown RBP19.98■□□□□ 0.79
LAPTM4B-201ENST00000445593 CCDC87Q9NVE4 849 aa19.98■□□□□ 0.79
LAPTM4B-201ENST00000445593 HMG20BQ9P0W2 317 aa19.98■□□□□ 0.79
LAPTM4B-201ENST00000445593 MTMR6Q9Y217 621 aa19.98■□□□□ 0.79
LAPTM4B-201ENST00000445593 NIP7Q9Y221 180 aaKnown RBP eCLIP19.98■□□□□ 0.79
LAPTM4B-201ENST00000445593 ZMYM1Q5SVZ6 1142 aa19.97■□□□□ 0.79
LAPTM4B-201ENST00000445593 INTS5Q6P9B9 1019 aaKnown RBP19.97■□□□□ 0.79
LAPTM4B-201ENST00000445593 GPR108Q9NPR9 543 aa19.97■□□□□ 0.79
LAPTM4B-201ENST00000445593 IL6STP40189 918 aaPredicted RBP19.97■□□□□ 0.79
LAPTM4B-201ENST00000445593 MCAMP43121 646 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms