RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 PSMA5P28066 241 aa18.83■□□□□ 0.6
SNX13-204ENST00000444712 MCMDC2Q4G0Z9 681 aa18.83■□□□□ 0.6
SNX13-204ENST00000444712 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
SNX13-204ENST00000444712 SUSD4Q5VX71 490 aa18.83■□□□□ 0.6
SNX13-204ENST00000444712 SYNE4Q8N205 404 aa18.83■□□□□ 0.6
SNX13-204ENST00000444712 CCDC85AQ96PX6 553 aaPredicted RBP18.83■□□□□ 0.6
SNX13-204ENST00000444712 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.6
SNX13-204ENST00000444712 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.6
SNX13-204ENST00000444712 ATP2B3Q16720 1220 aa18.82■□□□□ 0.6
SNX13-204ENST00000444712 RASEFQ8IZ41 740 aa18.82■□□□□ 0.6
SNX13-204ENST00000444712 XAGE2Q96GT9 111 aa18.82■□□□□ 0.6
SNX13-204ENST00000444712 GJD4Q96KN9 370 aaPredicted RBP18.82■□□□□ 0.6
SNX13-204ENST00000444712 MROH5Q6ZUA9 1318 aa18.82■□□□□ 0.6
SNX13-204ENST00000444712 TAF1LQ8IZX4 1826 aa18.82■□□□□ 0.6
SNX13-204ENST00000444712 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
SNX13-204ENST00000444712 CLEC17AQ6ZS10 378 aa18.81■□□□□ 0.6
SNX13-204ENST00000444712 DDX46Q7L014 1031 aaKnown RBP18.81■□□□□ 0.6
SNX13-204ENST00000444712 EDC3Q96F86 508 aaKnown RBP18.81■□□□□ 0.6
SNX13-204ENST00000444712 NIP7Q9Y221 180 aaKnown RBP eCLIP18.81■□□□□ 0.6
SNX13-204ENST00000444712 GOLIM4O00461 696 aa18.81■□□□□ 0.6
SNX13-204ENST00000444712 GSE1Q14687 1217 aa18.81■□□□□ 0.6
SNX13-204ENST00000444712 VPS53Q5VIR6 699 aa18.81■□□□□ 0.6
SNX13-204ENST00000444712 LINC00116Q8NCU8 138 aa18.81■□□□□ 0.6
SNX13-204ENST00000444712 TTC14Q96N46 770 aa18.81■□□□□ 0.6
SNX13-204ENST00000444712 CYP46A1Q9Y6A2 500 aa18.81■□□□□ 0.6
SNX13-204ENST00000444712 ATRNO75882 1429 aa18.8■□□□□ 0.6
SNX13-204ENST00000444712 GOLGA6L22H0YM25 854 aa18.8■□□□□ 0.6
SNX13-204ENST00000444712 CASTP20810 708 aaKnown RBP18.8■□□□□ 0.6
SNX13-204ENST00000444712 KRT32Q14532 448 aa18.8■□□□□ 0.6
SNX13-204ENST00000444712 CCDC152Q4G0S7 254 aa18.8■□□□□ 0.6
SNX13-204ENST00000444712 ZNF512BQ96KM6 892 aaPredicted RBP18.8■□□□□ 0.6
SNX13-204ENST00000444712 ZSWIM6Q9HCJ5 1215 aa18.8■□□□□ 0.6
SNX13-204ENST00000444712 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
SNX13-204ENST00000444712 CASZ1Q86V15 1759 aa18.8■□□□□ 0.6
SNX13-204ENST00000444712 TAF5LO75529 589 aa18.79■□□□□ 0.6
SNX13-204ENST00000444712 NTSR2O95665 410 aa18.79■□□□□ 0.6
SNX13-204ENST00000444712 ZFYP08048 801 aaPredicted RBP18.79■□□□□ 0.6
SNX13-204ENST00000444712 SSFA2P28290 1259 aa18.79■□□□□ 0.6
SNX13-204ENST00000444712 TSGA10IPQ3SY00 556 aa18.79■□□□□ 0.6
SNX13-204ENST00000444712 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
SNX13-204ENST00000444712 TRPC5Q9UL62 973 aaPredicted RBP18.79■□□□□ 0.6
SNX13-204ENST00000444712 SLC27A2O14975 620 aa18.79■□□□□ 0.6
SNX13-204ENST00000444712 JAKMIP1Q96N16 626 aaKnown RBP18.79■□□□□ 0.6
SNX13-204ENST00000444712 LIMCH1Q9UPQ0 1083 aa18.79■□□□□ 0.6
SNX13-204ENST00000444712 AFF2P51816 1311 aa18.79■□□□□ 0.6
SNX13-204ENST00000444712 RPAP1Q9BWH6 1393 aaPredicted RBP18.79■□□□□ 0.6
SNX13-204ENST00000444712 PDE8BO95263 885 aa18.78■□□□□ 0.6
SNX13-204ENST00000444712 RUFY3Q7L099 469 aa18.78■□□□□ 0.6
SNX13-204ENST00000444712 ZNF589Q86UQ0 364 aaPredicted RBP18.78■□□□□ 0.6
SNX13-204ENST00000444712 VGLL2Q8N8G2 317 aa18.78■□□□□ 0.6
SNX13-204ENST00000444712 ZSCAN31Q96LW9 406 aaPredicted RBP18.78■□□□□ 0.6
SNX13-204ENST00000444712 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
SNX13-204ENST00000444712 PDRG1Q9NUG6 133 aa18.78■□□□□ 0.6
SNX13-204ENST00000444712 AKAP11Q9UKA4 1901 aa18.77■□□□□ 0.6
SNX13-204ENST00000444712 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.6
SNX13-204ENST00000444712 RNF113AO15541 343 aaKnown RBP18.77■□□□□ 0.6
SNX13-204ENST00000444712 ONECUT3O60422 494 aaPredicted RBP18.77■□□□□ 0.6
SNX13-204ENST00000444712 HSPA1LP34931 641 aa18.77■□□□□ 0.6
SNX13-204ENST00000444712 ZMYM1Q5SVZ6 1142 aa18.77■□□□□ 0.6
SNX13-204ENST00000444712 ZGPATQ8N5A5 531 aaKnown RBP18.77■□□□□ 0.6
SNX13-204ENST00000444712 NDUFB9Q9Y6M9 179 aa18.77■□□□□ 0.6
SNX13-204ENST00000444712 RPS6KA4O75676 772 aa18.76■□□□□ 0.59
SNX13-204ENST00000444712 AK2P54819 239 aa18.76■□□□□ 0.59
SNX13-204ENST00000444712 ANKRD1Q15327 319 aa18.76■□□□□ 0.59
SNX13-204ENST00000444712 PUM3Q15397 648 aaKnown RBP18.76■□□□□ 0.59
SNX13-204ENST00000444712 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
SNX13-204ENST00000444712 SH2B1Q9NRF2 756 aaPredicted RBP18.76■□□□□ 0.59
SNX13-204ENST00000444712 UQCRFS1P1P0C7P4 283 aa18.76■□□□□ 0.59
SNX13-204ENST00000444712 HCLS1P14317 486 aaPredicted RBP18.76■□□□□ 0.59
SNX13-204ENST00000444712 ADORA1P30542 326 aa18.76■□□□□ 0.59
SNX13-204ENST00000444712 TTF1Q15361 905 aaPredicted RBP18.76■□□□□ 0.59
SNX13-204ENST00000444712 LPIN2Q92539 896 aa18.76■□□□□ 0.59
SNX13-204ENST00000444712 DSCC1Q9BVC3 393 aa18.76■□□□□ 0.59
SNX13-204ENST00000444712 ALDH8A1Q9H2A2 487 aaPredicted RBP18.76■□□□□ 0.59
SNX13-204ENST00000444712 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.76■□□□□ 0.59
SNX13-204ENST00000444712 IGHMBP2P38935 993 aaKnown RBP18.75■□□□□ 0.59
SNX13-204ENST00000444712 FKBP4Q02790 459 aaKnown RBP eCLIP18.75■□□□□ 0.59
SNX13-204ENST00000444712 SKOR2Q2VWA4 1001 aaPredicted RBP18.75■□□□□ 0.59
SNX13-204ENST00000444712 BLOC1S2Q6QNY1 142 aa18.75■□□□□ 0.59
SNX13-204ENST00000444712 ZSCAN25Q6NSZ9 544 aa18.74■□□□□ 0.59
SNX13-204ENST00000444712 NOL8Q76FK4 1167 aaKnown RBP18.74■□□□□ 0.59
SNX13-204ENST00000444712 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.74■□□□□ 0.593e-7■□□□□ 8.9
SNX13-204ENST00000444712 NARFQ9UHQ1 456 aa18.74■□□□□ 0.59
SNX13-204ENST00000444712 CCNL1Q9UK58 526 aaPredicted RBP18.74■□□□□ 0.59
SNX13-204ENST00000444712 FAM177BA6PVY3 158 aa18.74■□□□□ 0.59
SNX13-204ENST00000444712 SLC5A1P13866 664 aa18.74■□□□□ 0.59
SNX13-204ENST00000444712 ADCK5Q3MIX3 580 aa18.74■□□□□ 0.59
SNX13-204ENST00000444712 CDC5LQ99459 802 aaKnown RBP18.74■□□□□ 0.59
SNX13-204ENST00000444712 NYXQ9GZU5 481 aa18.74■□□□□ 0.59
SNX13-204ENST00000444712 C4BP0C0L5 1744 aa18.73■□□□□ 0.59
SNX13-204ENST00000444712 A0A1B0GUL6 1792 aa18.73■□□□□ 0.59
SNX13-204ENST00000444712 TRAK2O60296 914 aa18.72■□□□□ 0.59
SNX13-204ENST00000444712 BAG4O95429 457 aaKnown RBP18.72■□□□□ 0.59
SNX13-204ENST00000444712 FGFR2P21802 821 aa18.72■□□□□ 0.59
SNX13-204ENST00000444712 ARID4AP29374 1257 aaPredicted RBP18.72■□□□□ 0.59
SNX13-204ENST00000444712 RTCBQ9Y3I0 505 aaKnown RBP18.72■□□□□ 0.59
SNX13-204ENST00000444712 C4AP0C0L4 1744 aa18.72■□□□□ 0.59
SNX13-204ENST00000444712 ZPR1O75312 459 aa18.71■□□□□ 0.59
SNX13-204ENST00000444712 SEC62Q99442 399 aaKnown RBP18.71■□□□□ 0.59
SNX13-204ENST00000444712 LAMA4Q16363 1823 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms