RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
HDAC8-215ENST00000444609 VIL1P09327 827 aaKnown RBP13.86□□□□□ -0.19
HDAC8-215ENST00000444609 CRHR2Q13324 411 aa13.86□□□□□ -0.19
HDAC8-215ENST00000444609 WASHC4Q2M389 1173 aa13.86□□□□□ -0.19
HDAC8-215ENST00000444609 SCAF8Q9UPN6 1271 aaKnown RBP13.86□□□□□ -0.19
HDAC8-215ENST00000444609 ERVV-1B6SEH8 477 aa13.85□□□□□ -0.19
HDAC8-215ENST00000444609 HMOX1P09601 288 aa13.85□□□□□ -0.19
HDAC8-215ENST00000444609 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
HDAC8-215ENST00000444609 LDLRAD1Q5T700 205 aa13.85□□□□□ -0.19
HDAC8-215ENST00000444609 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
HDAC8-215ENST00000444609 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
HDAC8-215ENST00000444609 UBN2Q6ZU65 1347 aa13.85□□□□□ -0.19
HDAC8-215ENST00000444609 BTBD11A6QL63 1104 aa13.84□□□□□ -0.19
HDAC8-215ENST00000444609 NTSR2O95665 410 aa13.84□□□□□ -0.19
HDAC8-215ENST00000444609 GPTP24298 496 aa13.84□□□□□ -0.19
HDAC8-215ENST00000444609 ARHGEF6Q15052 776 aa13.84□□□□□ -0.19
HDAC8-215ENST00000444609 SLC10A5Q5PT55 438 aa13.84□□□□□ -0.19
HDAC8-215ENST00000444609 SH3TC2Q8TF17 1288 aa13.84□□□□□ -0.19
HDAC8-215ENST00000444609 FAM122AQ96E09 287 aa13.84□□□□□ -0.19
HDAC8-215ENST00000444609 RIMBP2O15034 1052 aa13.83□□□□□ -0.2
HDAC8-215ENST00000444609 ECE2O60344 883 aa13.83□□□□□ -0.2
HDAC8-215ENST00000444609 HOXD11P31277 338 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-215ENST00000444609 ARMC9Q7Z3E5 817 aa13.83□□□□□ -0.2
HDAC8-215ENST00000444609 BMP8BP34820 402 aa13.82□□□□□ -0.2
HDAC8-215ENST00000444609 NF2P35240 595 aa13.82□□□□□ -0.2
HDAC8-215ENST00000444609 DOK7Q18PE1 504 aa13.82□□□□□ -0.2
HDAC8-215ENST00000444609 LRIT3Q3SXY7 679 aa13.82□□□□□ -0.2
HDAC8-215ENST00000444609 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
HDAC8-215ENST00000444609 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
HDAC8-215ENST00000444609 ZNF34Q8IZ26 560 aa13.81□□□□□ -0.2
HDAC8-215ENST00000444609 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
HDAC8-215ENST00000444609 MYOZ2Q9NPC6 264 aa13.81□□□□□ -0.2
HDAC8-215ENST00000444609 MAP3K15Q6ZN16 1313 aa13.81□□□□□ -0.2
HDAC8-215ENST00000444609 ZBTB48P10074 688 aaPredicted RBP13.8□□□□□ -0.2
HDAC8-215ENST00000444609 AGBL3Q8NEM8 1001 aa13.8□□□□□ -0.2
HDAC8-215ENST00000444609 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
HDAC8-215ENST00000444609 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
HDAC8-215ENST00000444609 DUOX1Q9NRD9 1551 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 EVI5O60447 810 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 GJA8P48165 433 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 GRAPQ13588 217 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 PRKG1Q13976 671 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 MTFR1Q15390 333 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 TMC4Q7Z404 712 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 PPP1R42Q7Z4L9 355 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 GRAPLQ8TC17 118 aaPredicted RBP13.79□□□□□ -0.2
HDAC8-215ENST00000444609 GDF15Q99988 308 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 POLLQ9UGP5 575 aa13.79□□□□□ -0.2
HDAC8-215ENST00000444609 KDM3BQ7LBC6 1761 aa13.78□□□□□ -0.2
HDAC8-215ENST00000444609 USP17L8P0C7I0 530 aa13.78□□□□□ -0.2
HDAC8-215ENST00000444609 RSBN1LQ6PCB5 846 aaPredicted RBP13.78□□□□□ -0.2
HDAC8-215ENST00000444609 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
HDAC8-215ENST00000444609 NGEFQ8N5V2 710 aa13.78□□□□□ -0.2
HDAC8-215ENST00000444609 WNK4Q96J92 1243 aa13.78□□□□□ -0.2
HDAC8-215ENST00000444609 PTPN18Q99952 460 aa13.78□□□□□ -0.2
HDAC8-215ENST00000444609 ANGEL1Q9UNK9 670 aaKnown RBP13.78□□□□□ -0.2
HDAC8-215ENST00000444609 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
HDAC8-215ENST00000444609 C6orf229H3BNL8 230 aa13.77□□□□□ -0.21
HDAC8-215ENST00000444609 BCAMP50895 628 aa13.77□□□□□ -0.21
HDAC8-215ENST00000444609 NBPF9Q3BBW0 867 aa13.77□□□□□ -0.21
HDAC8-215ENST00000444609 TTLL7Q6ZT98 887 aa13.77□□□□□ -0.21
HDAC8-215ENST00000444609 MORC1Q86VD1 984 aa13.77□□□□□ -0.21
HDAC8-215ENST00000444609 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.21
HDAC8-215ENST00000444609 GMLQ99445 158 aa13.77□□□□□ -0.21
HDAC8-215ENST00000444609 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
HDAC8-215ENST00000444609 GJB1P08034 283 aa13.76□□□□□ -0.21
HDAC8-215ENST00000444609 PARP10Q53GL7 1025 aa13.76□□□□□ -0.21
HDAC8-215ENST00000444609 SYMPKQ92797 1274 aaKnown RBP13.76□□□□□ -0.21
HDAC8-215ENST00000444609 GUCD1Q96NT3 240 aa13.76□□□□□ -0.21
HDAC8-215ENST00000444609 EYA3Q99504 573 aa13.76□□□□□ -0.21
HDAC8-215ENST00000444609 UTP14AQ9BVJ6 771 aaKnown RBP13.76□□□□□ -0.21
HDAC8-215ENST00000444609 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
HDAC8-215ENST00000444609 GAS2L2Q8NHY3 880 aa13.75□□□□□ -0.21
HDAC8-215ENST00000444609 ZBTB3Q9H5J0 574 aa13.75□□□□□ -0.21
HDAC8-215ENST00000444609 FARP2O94887 1054 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-215ENST00000444609 GPSM2P81274 684 aa13.74□□□□□ -0.21
HDAC8-215ENST00000444609 MAP3K11Q16584 847 aa13.74□□□□□ -0.21
HDAC8-215ENST00000444609 CLMNQ96JQ2 1002 aa13.74□□□□□ -0.21
HDAC8-215ENST00000444609 FZD1Q9UP38 647 aa13.74□□□□□ -0.21
HDAC8-215ENST00000444609 TTC28Q96AY4 2481 aa13.73□□□□□ -0.21
HDAC8-215ENST00000444609 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
HDAC8-215ENST00000444609 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-215ENST00000444609 MUC3AQ02505 3323 aa13.72□□□□□ -0.21
HDAC8-215ENST00000444609 UNCXA6NJT0 531 aa13.72□□□□□ -0.21
HDAC8-215ENST00000444609 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
HDAC8-215ENST00000444609 GNRH1P01148 92 aa13.72□□□□□ -0.21
HDAC8-215ENST00000444609 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-215ENST00000444609 PRMT2P55345 433 aa13.72□□□□□ -0.21
HDAC8-215ENST00000444609 FAM109BQ6ICB4 259 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-215ENST00000444609 TDHQ8IZJ6 230 aa13.72□□□□□ -0.21
HDAC8-215ENST00000444609 TBC1D16Q8TBP0 767 aa13.72□□□□□ -0.21
HDAC8-215ENST00000444609 ZC3H12CQ9C0D7 883 aaKnown RBP13.72□□□□□ -0.21
HDAC8-215ENST00000444609 SIPA1L3O60292 1781 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-215ENST00000444609 TNFRSF10AO00220 468 aa13.71□□□□□ -0.21
HDAC8-215ENST00000444609 WNT10BO00744 389 aa13.71□□□□□ -0.21
HDAC8-215ENST00000444609 CCL5P13501 91 aa13.71□□□□□ -0.21
HDAC8-215ENST00000444609 GJA5P36382 358 aa13.71□□□□□ -0.21
HDAC8-215ENST00000444609 ARHGAP39Q9C0H5 1083 aa13.71□□□□□ -0.21
HDAC8-215ENST00000444609 ZFYVE28Q9HCC9 887 aa13.71□□□□□ -0.21
HDAC8-215ENST00000444609 G3V3G9 751 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms