RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SNX14Q9Y5W7 946 aa12.41□□□□□ -0.42
TOP3B-210ENST00000444502 USP48Q86UV5 1035 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 EAF2Q96CJ1 260 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-210ENST00000444502 ZNF830Q96NB3 372 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-210ENST00000444502 SDF4Q9BRK5 362 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 COL3A1P02461 1466 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-210ENST00000444502 WDR17Q8IZU2 1322 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 DBNDD2Q9BQY9 259 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 METTL22Q9BUU2 404 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-210ENST00000444502 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
TOP3B-210ENST00000444502 DIP2BQ9P265 1576 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 PTPRUQ92729 1446 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 KIF20AO95235 890 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 GCKRQ14397 625 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 CCDC129Q6ZRS4 1044 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 CARD10Q9BWT7 1032 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 MKNK2Q9HBH9 465 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 CCDC39Q9UFE4 941 aa12.4□□□□□ -0.42
TOP3B-210ENST00000444502 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-210ENST00000444502 IL15P40933 162 aaPredicted RBP12.4□□□□□ -0.43
TOP3B-210ENST00000444502 CREB3L3Q68CJ9 461 aa12.4□□□□□ -0.43
TOP3B-210ENST00000444502 CCDC87Q9NVE4 849 aa12.4□□□□□ -0.43
TOP3B-210ENST00000444502 AGLP35573 1532 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 DLC1Q96QB1 1528 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 RIMBP2O15034 1052 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 BRF1Q92994 677 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 SH3TC1Q8TE82 1336 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 TPD52L1Q16890 204 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-210ENST00000444502 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
TOP3B-210ENST00000444502 ZBTB9Q96C00 473 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 ZSCAN22P10073 491 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-210ENST00000444502 CRACR2BQ8N4Y2 399 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-210ENST00000444502 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 TNMDQ9H2S6 317 aa12.39□□□□□ -0.43
TOP3B-210ENST00000444502 ZNF213O14771 459 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 TRIM37O94972 964 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 XBP1P17861 261 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
TOP3B-210ENST00000444502 TMOD2Q9NZR1 351 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 USP31Q70CQ4 1352 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 CCDC66A2RUB6 948 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 TAF5LO75529 589 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 PTH1RQ03431 593 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 OSBPL3Q9H4L5 887 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 OVOS2A0A0J9YW53 1432 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 CRB1P82279 1406 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 OVOS2Q6IE36 1432 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 NEURL1BA8MQ27 555 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 ME1P48163 572 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 SLC9C2Q5TAH2 1124 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 CHST3Q7LGC8 479 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 KIF2CQ99661 725 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 TRIM5Q9C035 493 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 SIGLEC1Q9BZZ2 1709 aa12.38□□□□□ -0.43
TOP3B-210ENST00000444502 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
TOP3B-210ENST00000444502 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 SYT1P21579 422 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 ITGA6P23229 1130 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 TAF3Q5VWG9 929 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 FAM173BQ6P4H8 233 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 RAD50Q92878 1312 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 GIMAP6Q6P9H5 292 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 ZFP91Q96JP5 570 aaPredicted RBP12.37□□□□□ -0.43
TOP3B-210ENST00000444502 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 HSPA4P34932 840 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 SIK1P57059 783 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 TPM4P67936 248 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 CYP27B1O15528 508 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 STK38Q15208 465 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 MIGA1Q8NAN2 632 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 BRMS1Q9HCU9 246 aa12.37□□□□□ -0.43
TOP3B-210ENST00000444502 LMBRD1Q9NUN5 540 aa12.36□□□□□ -0.43
TOP3B-210ENST00000444502 TLR7Q9NYK1 1049 aaKnown RBP12.36□□□□□ -0.43
TOP3B-210ENST00000444502 MYO5BQ9ULV0 1848 aa12.36□□□□□ -0.43
TOP3B-210ENST00000444502 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
TOP3B-210ENST00000444502 STAP2Q9UGK3 403 aa12.36□□□□□ -0.43
TOP3B-210ENST00000444502 PARP3Q9Y6F1 533 aa12.36□□□□□ -0.43
TOP3B-210ENST00000444502 KINO60870 393 aaKnown RBP12.36□□□□□ -0.43
TOP3B-210ENST00000444502 CYP7A1P22680 504 aa12.36□□□□□ -0.43
TOP3B-210ENST00000444502 HMGN5P82970 282 aaKnown RBP12.36□□□□□ -0.43
TOP3B-210ENST00000444502 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
TOP3B-210ENST00000444502 TNNI3KQ59H18 835 aa12.35□□□□□ -0.43
TOP3B-210ENST00000444502 INTS4Q96HW7 963 aaKnown RBP12.35□□□□□ -0.43
TOP3B-210ENST00000444502 ZC3H12CQ9C0D7 883 aaKnown RBP12.35□□□□□ -0.43
TOP3B-210ENST00000444502 FPGT-TNNI3KV9GXZ4 949 aa12.35□□□□□ -0.43
TOP3B-210ENST00000444502 F13A1P00488 732 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms