RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 CPDO75976 1380 aa22.3■■□□□ 1.16
PMPCB-204ENST00000444457 COL15A1P39059 1388 aa22.3■■□□□ 1.16
PMPCB-204ENST00000444457 SPATA31A3Q5VYP0 1347 aa22.3■■□□□ 1.16
PMPCB-204ENST00000444457 KCNJ4P48050 445 aa22.3■■□□□ 1.16
PMPCB-204ENST00000444457 RFX5P48382 616 aaPredicted RBP22.3■■□□□ 1.16
PMPCB-204ENST00000444457 PLA2G4DQ86XP0 818 aa22.3■■□□□ 1.16
PMPCB-204ENST00000444457 CCDC83Q8IWF9 413 aa22.3■■□□□ 1.16
PMPCB-204ENST00000444457 MED23Q9ULK4 1368 aa22.29■■□□□ 1.16
PMPCB-204ENST00000444457 CABP4P57796 275 aa22.29■■□□□ 1.16
PMPCB-204ENST00000444457 FAM193AP78312 1265 aa22.29■■□□□ 1.16
PMPCB-204ENST00000444457 SLC20A2Q08357 652 aa22.29■■□□□ 1.16
PMPCB-204ENST00000444457 TYRO3Q06418 890 aa22.28■■□□□ 1.16
PMPCB-204ENST00000444457 MAP3K11Q16584 847 aa22.28■■□□□ 1.16
PMPCB-204ENST00000444457 RABL6Q3YEC7 729 aaPredicted RBP22.28■■□□□ 1.16
PMPCB-204ENST00000444457 LUZP1Q86V48 1076 aa22.28■■□□□ 1.16
PMPCB-204ENST00000444457 MTMR6Q9Y217 621 aa22.28■■□□□ 1.16
PMPCB-204ENST00000444457 CDK11BP21127 795 aaKnown RBP22.28■■□□□ 1.16
PMPCB-204ENST00000444457 PTPN12Q05209 780 aaKnown RBP22.28■■□□□ 1.16
PMPCB-204ENST00000444457 UBE3BQ7Z3V4 1068 aa22.28■■□□□ 1.16
PMPCB-204ENST00000444457 TIGD1Q96MW7 591 aa22.28■■□□□ 1.16
PMPCB-204ENST00000444457 SLC27A2O14975 620 aa22.27■■□□□ 1.16
PMPCB-204ENST00000444457 KMT5BQ4FZB7 885 aa22.27■■□□□ 1.16
PMPCB-204ENST00000444457 NRBP1Q9UHY1 535 aa22.27■■□□□ 1.16
PMPCB-204ENST00000444457 GJB2P29033 226 aa22.27■■□□□ 1.16
PMPCB-204ENST00000444457 ZNF75DP51815 510 aa22.27■■□□□ 1.16
PMPCB-204ENST00000444457 DDX54Q8TDD1 881 aaKnown RBP22.27■■□□□ 1.16
PMPCB-204ENST00000444457 ST3GAL1Q11201 340 aa22.26■■□□□ 1.15
PMPCB-204ENST00000444457 NUP62CLQ9H1M0 184 aa22.26■■□□□ 1.15
PMPCB-204ENST00000444457 JCADQ9P266 1359 aa22.26■■□□□ 1.15
PMPCB-204ENST00000444457 TPD52L1Q16890 204 aaPredicted RBP22.26■■□□□ 1.15
PMPCB-204ENST00000444457 TNNI3KQ59H18 835 aa22.26■■□□□ 1.15
PMPCB-204ENST00000444457 CREBRFQ8IUR6 639 aa22.26■■□□□ 1.15
PMPCB-204ENST00000444457 CBX8Q9HC52 389 aa22.26■■□□□ 1.15
PMPCB-204ENST00000444457 DBNLQ9UJU6 430 aaKnown RBP22.26■■□□□ 1.15
PMPCB-204ENST00000444457 FPGT-TNNI3KV9GXZ4 949 aa22.26■■□□□ 1.15
PMPCB-204ENST00000444457 ATP5J2-PTCD1G3V325 749 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 PTCD1O75127 700 aaKnown RBP22.25■■□□□ 1.15
PMPCB-204ENST00000444457 PSMA5P28066 241 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 ME3Q16798 604 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 CEP135Q66GS9 1140 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 DRC7Q8IY82 874 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 PLBD2Q8NHP8 589 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 A0A087WZG4 1122 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 ATP5JP18859 108 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 TFCP2Q12800 502 aa22.25■■□□□ 1.15
PMPCB-204ENST00000444457 VGLL3A8MV65 326 aa22.24■■□□□ 1.15
PMPCB-204ENST00000444457 RNF20Q5VTR2 975 aa22.24■■□□□ 1.15
PMPCB-204ENST00000444457 ZNF589Q86UQ0 364 aaPredicted RBP22.24■■□□□ 1.15
PMPCB-204ENST00000444457 TDRD7Q8NHU6 1098 aaKnown RBP22.24■■□□□ 1.15
PMPCB-204ENST00000444457 CASP7P55210 303 aa22.24■■□□□ 1.15
PMPCB-204ENST00000444457 SLFNL1Q499Z3 407 aa22.24■■□□□ 1.15
PMPCB-204ENST00000444457 EDC3Q96F86 508 aaKnown RBP22.24■■□□□ 1.15
PMPCB-204ENST00000444457 ELP1O95163 1332 aa22.23■■□□□ 1.15
PMPCB-204ENST00000444457 CACTINQ8WUQ7 758 aaKnown RBP22.23■■□□□ 1.15
PMPCB-204ENST00000444457 TRIM5Q9C035 493 aa22.23■■□□□ 1.15
PMPCB-204ENST00000444457 CALCOCO1Q9P1Z2 691 aa22.23■■□□□ 1.15
PMPCB-204ENST00000444457 TPCN1Q9ULQ1 816 aa22.23■■□□□ 1.15
PMPCB-204ENST00000444457 UBR2Q8IWV8 1755 aa22.23■■□□□ 1.15
PMPCB-204ENST00000444457 TULP2O00295 520 aa22.23■■□□□ 1.15
PMPCB-204ENST00000444457 ANO6Q4KMQ2 910 aa22.23■■□□□ 1.15
PMPCB-204ENST00000444457 NUP188Q5SRE5 1749 aa22.22■■□□□ 1.15
PMPCB-204ENST00000444457 COL9A3Q14050 684 aaPredicted RBP22.22■■□□□ 1.15
PMPCB-204ENST00000444457 BLOC1S2Q6QNY1 142 aa22.21■■□□□ 1.15
PMPCB-204ENST00000444457 RBM43Q6ZSC3 357 aaKnown RBP22.21■■□□□ 1.15
PMPCB-204ENST00000444457 TTC6Q86TZ1 520 aa22.21■■□□□ 1.15
PMPCB-204ENST00000444457 ZNF215Q9UL58 517 aaPredicted RBP22.21■■□□□ 1.15
PMPCB-204ENST00000444457 XIRP1Q702N8 1843 aaKnown RBP22.21■■□□□ 1.15
PMPCB-204ENST00000444457 CDC25BP30305 580 aa22.21■■□□□ 1.15
PMPCB-204ENST00000444457 RBM6P78332 1123 aaKnown RBP22.21■■□□□ 1.15
PMPCB-204ENST00000444457 NECAB1Q8N987 351 aa22.21■■□□□ 1.15
PMPCB-204ENST00000444457 DNAJC2Q99543 621 aaKnown RBP22.21■■□□□ 1.15
PMPCB-204ENST00000444457 HMG20BQ9P0W2 317 aa22.21■■□□□ 1.15
PMPCB-204ENST00000444457 RFX7Q2KHR2 1363 aa22.21■■□□□ 1.15
PMPCB-204ENST00000444457 DTNBO60941 627 aa22.2■■□□□ 1.15
PMPCB-204ENST00000444457 LIG1P18858 919 aa22.2■■□□□ 1.15
PMPCB-204ENST00000444457 TAF6LQ9Y6J9 622 aa22.2■■□□□ 1.15
PMPCB-204ENST00000444457 ZNF335Q9H4Z2 1342 aaPredicted RBP22.2■■□□□ 1.14
PMPCB-204ENST00000444457 NBPF26B4DH59 902 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 TAF5LO75529 589 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 CAMK4Q16566 473 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 NBPF14Q5TI25 921 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 NBPF10Q6P3W6 841 aaKnown RBP22.2■■□□□ 1.14
PMPCB-204ENST00000444457 FBXO38Q6PIJ6 1188 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 NYAP1Q6ZVC0 841 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 NBPF15Q8N660 670 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 CLIP2Q9UDT6 1046 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 PCDH11XQ9BZA7 1347 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 PCDH11YQ9BZA8 1340 aa22.2■■□□□ 1.14
PMPCB-204ENST00000444457 RPS6KB1P23443 525 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 TSGA10IPQ3SY00 556 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 ERO1AQ96HE7 468 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 DBNDD2Q9BQY9 259 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 TNMDQ9H2S6 317 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 TJP1Q07157 1748 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 KRT85P78386 507 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 ANKRD1Q15327 319 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 CCDC144BQ3MJ40 725 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 LMBR1LQ6UX01 489 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 CCDC144CPQ8IYA2 1237 aa22.19■■□□□ 1.14
PMPCB-204ENST00000444457 ALDH8A1Q9H2A2 487 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms