RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CACNA1FO60840 1977 aa17.87■□□□□ 0.45
TREX1-202ENST00000444177 CDHR2Q9BYE9 1310 aa17.87■□□□□ 0.45
TREX1-202ENST00000444177 LRRC37AA6NMS7 1700 aa17.86■□□□□ 0.45
TREX1-202ENST00000444177 TRAF5O00463 557 aa17.86■□□□□ 0.45
TREX1-202ENST00000444177 PSMD14O00487 310 aa17.86■□□□□ 0.45
TREX1-202ENST00000444177 HIRAP54198 1017 aaPredicted RBP17.86■□□□□ 0.45
TREX1-202ENST00000444177 CWF19L2Q2TBE0 894 aaKnown RBP17.86■□□□□ 0.45
TREX1-202ENST00000444177 GPR101Q96P66 508 aaPredicted RBP17.86■□□□□ 0.45
TREX1-202ENST00000444177 ZC3H12CQ9C0D7 883 aaKnown RBP17.86■□□□□ 0.45
TREX1-202ENST00000444177 KCNQ5Q9NR82 932 aa17.86■□□□□ 0.45
TREX1-202ENST00000444177 ANKIB1Q9P2G1 1089 aa17.86■□□□□ 0.45
TREX1-202ENST00000444177 PGAP2Q9UHJ9 254 aa17.86■□□□□ 0.45
TREX1-202ENST00000444177 ABT1Q9ULW3 272 aaKnown RBP17.86■□□□□ 0.45
TREX1-202ENST00000444177 ZBTB12Q9Y330 459 aaPredicted RBP17.86■□□□□ 0.45
TREX1-202ENST00000444177 RASSF10A6NK89 507 aa17.85■□□□□ 0.45
TREX1-202ENST00000444177 NEURL1BA8MQ27 555 aa17.85■□□□□ 0.45
TREX1-202ENST00000444177 H7C1D1 291 aa17.85■□□□□ 0.45
TREX1-202ENST00000444177 ANKRD18AQ8IVF6 992 aa17.85■□□□□ 0.45
TREX1-202ENST00000444177 DPF2Q92785 391 aa17.85■□□□□ 0.45
TREX1-202ENST00000444177 SHTN1A0MZ66 631 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 H7C1W4 665 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 ECE2O60344 883 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 CTSWP56202 376 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 SLFN5Q08AF3 891 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 CST9Q5W186 159 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 TTLL11Q8NHH1 800 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 ZC3H15Q8WU90 426 aaKnown RBP17.84■□□□□ 0.45
TREX1-202ENST00000444177 DNAAF4Q8WXU2 420 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 CDCA7LQ96GN5 454 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 GGA1Q9UJY5 639 aa17.84■□□□□ 0.45
TREX1-202ENST00000444177 UFL1O94874 794 aa17.83■□□□□ 0.44
TREX1-202ENST00000444177 MICALL2Q8IY33 904 aa17.83■□□□□ 0.44
TREX1-202ENST00000444177 TRPM4Q8TD43 1214 aa17.83■□□□□ 0.44
TREX1-202ENST00000444177 GCKRQ14397 625 aa17.82■□□□□ 0.44
TREX1-202ENST00000444177 UBE3BQ7Z3V4 1068 aa17.82■□□□□ 0.44
TREX1-202ENST00000444177 CDC5LQ99459 802 aaKnown RBP17.82■□□□□ 0.44
TREX1-202ENST00000444177 GLIS2Q9BZE0 524 aaPredicted RBP17.82■□□□□ 0.44
TREX1-202ENST00000444177 RTL9Q8NET4 1388 aa17.81■□□□□ 0.44
TREX1-202ENST00000444177 F6X3S4 739 aa17.81■□□□□ 0.44
TREX1-202ENST00000444177 G3V3G9 751 aa17.81■□□□□ 0.44
TREX1-202ENST00000444177 RPS12P25398 132 aaKnown RBP17.81■□□□□ 0.44
TREX1-202ENST00000444177 DCAF8Q5TAQ9 597 aa17.81■□□□□ 0.44
TREX1-202ENST00000444177 SAMD7Q7Z3H4 446 aa17.81■□□□□ 0.44
TREX1-202ENST00000444177 GREM2Q9H772 168 aa17.81■□□□□ 0.44
TREX1-202ENST00000444177 XDHP47989 1333 aa17.8■□□□□ 0.44
TREX1-202ENST00000444177 WDR33Q9C0J8 1336 aaKnown RBP17.8■□□□□ 0.44
TREX1-202ENST00000444177 FOXN1O15353 648 aa17.8■□□□□ 0.44
TREX1-202ENST00000444177 VIL1P09327 827 aaKnown RBP17.8■□□□□ 0.44
TREX1-202ENST00000444177 ATP2B4P23634 1241 aa17.8■□□□□ 0.44
TREX1-202ENST00000444177 CDC37L1Q7L3B6 337 aa17.8■□□□□ 0.44
TREX1-202ENST00000444177 TNS4Q8IZW8 715 aa17.8■□□□□ 0.44
TREX1-202ENST00000444177 LINS1Q8NG48 757 aa17.8■□□□□ 0.44
TREX1-202ENST00000444177 BSDC1Q9NW68 430 aaPredicted RBP17.8■□□□□ 0.44
TREX1-202ENST00000444177 WBP1LQ9NX94 342 aa17.8■□□□□ 0.44
TREX1-202ENST00000444177 MINPP1Q9UNW1 487 aa17.8■□□□□ 0.44
TREX1-202ENST00000444177 CELF2O95319 508 aaKnown RBP17.79■□□□□ 0.44
TREX1-202ENST00000444177 TBC1D10BQ4KMP7 808 aaPredicted RBP17.79■□□□□ 0.44
TREX1-202ENST00000444177 PLA2G12BQ9BX93 195 aa17.79■□□□□ 0.44
TREX1-202ENST00000444177 TLL2Q9Y6L7 1015 aa17.79■□□□□ 0.44
TREX1-202ENST00000444177 MYH3P11055 1940 aa17.78■□□□□ 0.44
TREX1-202ENST00000444177 WTIPA6NIX2 430 aaPredicted RBP17.78■□□□□ 0.44
TREX1-202ENST00000444177 CASP7P55210 303 aa17.78■□□□□ 0.44
TREX1-202ENST00000444177 RBM26Q5T8P6 1007 aaKnown RBP17.78■□□□□ 0.44
TREX1-202ENST00000444177 AIDAQ96BJ3 306 aa17.78■□□□□ 0.44
TREX1-202ENST00000444177 EGFRP00533 1210 aa17.77■□□□□ 0.44
TREX1-202ENST00000444177 CSF1RP07333 972 aa17.77■□□□□ 0.44
TREX1-202ENST00000444177 PAXIP1Q6ZW49 1069 aaPredicted RBP17.77■□□□□ 0.44
TREX1-202ENST00000444177 USP48Q86UV5 1035 aa17.77■□□□□ 0.44
TREX1-202ENST00000444177 MRPL50Q8N5N7 158 aaKnown RBP17.77■□□□□ 0.44
TREX1-202ENST00000444177 CAPNS2Q96L46 248 aa17.77■□□□□ 0.44
TREX1-202ENST00000444177 ECE1P42892 770 aa17.76■□□□□ 0.43
TREX1-202ENST00000444177 BEND3Q5T5X7 828 aa17.76■□□□□ 0.43
TREX1-202ENST00000444177 CYP4F22Q6NT55 531 aa17.76■□□□□ 0.43
TREX1-202ENST00000444177 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
TREX1-202ENST00000444177 SAPCD2Q86UD0 394 aa17.76■□□□□ 0.43
TREX1-202ENST00000444177 TRPM7Q96QT4 1865 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 SCN9AQ15858 1988 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 ITGA6P23229 1130 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 IGHMBP2P38935 993 aaKnown RBP17.75■□□□□ 0.43
TREX1-202ENST00000444177 CTCFP49711 727 aaPredicted RBP17.75■□□□□ 0.43
TREX1-202ENST00000444177 CCT4P50991 539 aaKnown RBP17.75■□□□□ 0.43
TREX1-202ENST00000444177 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
TREX1-202ENST00000444177 MAP2K1Q02750 393 aaPredicted RBP17.75■□□□□ 0.43
TREX1-202ENST00000444177 GRM1Q13255 1194 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 RSBN1LQ6PCB5 846 aaPredicted RBP17.75■□□□□ 0.43
TREX1-202ENST00000444177 DLK2Q6UY11 383 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 PODNQ7Z5L7 613 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 TRMT2AQ8IZ69 625 aaKnown RBP17.75■□□□□ 0.43
TREX1-202ENST00000444177 SSH1Q8WYL5 1049 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 ZNF408Q9H9D4 720 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 SMC4Q9NTJ3 1288 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 SPEF2Q9C093 1822 aa17.75■□□□□ 0.43
TREX1-202ENST00000444177 KRT26Q7Z3Y9 468 aa17.74■□□□□ 0.43
TREX1-202ENST00000444177 AGBL3Q8NEM8 1001 aa17.74■□□□□ 0.43
TREX1-202ENST00000444177 PRDM10Q9NQV6 1147 aa17.74■□□□□ 0.43
TREX1-202ENST00000444177 PTPRCP08575 1304 aa17.73■□□□□ 0.43
TREX1-202ENST00000444177 USP17L3A6NCW0 530 aa17.73■□□□□ 0.43
TREX1-202ENST00000444177 USP17L4A6NCW7 530 aa17.73■□□□□ 0.43
TREX1-202ENST00000444177 ZNF280AP59817 542 aaPredicted RBP17.73■□□□□ 0.43
TREX1-202ENST00000444177 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms