RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 PRIM1P49642 420 aaKnown RBP19.34■□□□□ 0.69
PIKFYVE-206ENST00000443896 TIMM10P62072 90 aa19.34■□□□□ 0.69
PIKFYVE-206ENST00000443896 USP48Q86UV5 1035 aa19.34■□□□□ 0.69
PIKFYVE-206ENST00000443896 KRT32Q14532 448 aa19.34■□□□□ 0.69
PIKFYVE-206ENST00000443896 FOXD4L6Q3SYB3 417 aaPredicted RBP19.34■□□□□ 0.69
PIKFYVE-206ENST00000443896 FOXD4L3Q6VB84 417 aaPredicted RBP19.34■□□□□ 0.69
PIKFYVE-206ENST00000443896 CHGBP05060 677 aa19.33■□□□□ 0.69
PIKFYVE-206ENST00000443896 PDIA4P13667 645 aaKnown RBP19.33■□□□□ 0.69
PIKFYVE-206ENST00000443896 LRSAM1Q6UWE0 723 aa19.33■□□□□ 0.69
PIKFYVE-206ENST00000443896 KIF6Q6ZMV9 814 aa19.33■□□□□ 0.69
PIKFYVE-206ENST00000443896 STARD3NLO95772 234 aa19.33■□□□□ 0.68
PIKFYVE-206ENST00000443896 DNTTIP2Q5QJE6 756 aaKnown RBP19.33■□□□□ 0.68
PIKFYVE-206ENST00000443896 SEC62Q99442 399 aaKnown RBP19.33■□□□□ 0.68
PIKFYVE-206ENST00000443896 GDPD2Q9HCC8 539 aa19.33■□□□□ 0.68
PIKFYVE-206ENST00000443896 PAG1Q9NWQ8 432 aa19.33■□□□□ 0.68
PIKFYVE-206ENST00000443896 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
PIKFYVE-206ENST00000443896 PLA2G12BQ9BX93 195 aa19.33■□□□□ 0.68
PIKFYVE-206ENST00000443896 ATP6V1DQ9Y5K8 247 aa19.33■□□□□ 0.68
PIKFYVE-206ENST00000443896 PCCAP05165 728 aaPredicted RBP19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 TOB2Q14106 344 aaPredicted RBP19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 CCDC129Q6ZRS4 1044 aa19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 NECAB1Q8N987 351 aa19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 FBXO3Q9UK99 471 aa19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 MTMR6Q9Y217 621 aa19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 LRP6O75581 1613 aa19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 PPP1R9BQ96SB3 815 aa19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 RBSNQ9H1K0 784 aa19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 ZNF330Q9Y3S2 320 aaPredicted RBP19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 BCL9O00512 1426 aa19.32■□□□□ 0.68
PIKFYVE-206ENST00000443896 SYCE3A1L190 88 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 SPDYE4A6NLX3 237 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 GADD45BO75293 160 aaPredicted RBP19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 MAP7D2Q96T17 732 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 PUS3Q9BZE2 481 aaKnown RBP19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 PLCH1Q4KWH8 1693 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 TCHHQ07283 1943 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 A0A1B0GUL7 405 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 GOLIM4O00461 696 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 CCDC57Q2TAC2 916 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 SPEF2Q9C093 1822 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 PPP4R3BQ5MIZ7 849 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 HELLSQ9NRZ9 838 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 CNPY2Q9Y2B0 182 aa19.31■□□□□ 0.68
PIKFYVE-206ENST00000443896 MAP3K15Q6ZN16 1313 aa19.3■□□□□ 0.68
PIKFYVE-206ENST00000443896 ZBTB38Q8NAP3 1195 aaPredicted RBP19.3■□□□□ 0.68
PIKFYVE-206ENST00000443896 SYAP1Q96A49 352 aaPredicted RBP19.3■□□□□ 0.68
PIKFYVE-206ENST00000443896 ZSCAN20P17040 1043 aaPredicted RBP19.3■□□□□ 0.68
PIKFYVE-206ENST00000443896 TCEANC2Q96MN5 208 aa19.3■□□□□ 0.68
PIKFYVE-206ENST00000443896 GIGYF2Q6Y7W6 1299 aaKnown RBP19.29■□□□□ 0.68
PIKFYVE-206ENST00000443896 CEP126Q9P2H0 1117 aa19.29■□□□□ 0.68
PIKFYVE-206ENST00000443896 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.29■□□□□ 0.68
PIKFYVE-206ENST00000443896 CSF1RP07333 972 aa19.29■□□□□ 0.68
PIKFYVE-206ENST00000443896 DMTNQ08495 405 aa19.29■□□□□ 0.68
PIKFYVE-206ENST00000443896 NEK1Q96PY6 1258 aa19.29■□□□□ 0.68
PIKFYVE-206ENST00000443896 FAM89AQ96GI7 184 aa19.29■□□□□ 0.68
PIKFYVE-206ENST00000443896 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
PIKFYVE-206ENST00000443896 CYP21A2P08686 494 aa19.28■□□□□ 0.68
PIKFYVE-206ENST00000443896 IFIT1P09914 478 aaKnown RBP19.28■□□□□ 0.68
PIKFYVE-206ENST00000443896 ZMYM1Q5SVZ6 1142 aa19.28■□□□□ 0.68
PIKFYVE-206ENST00000443896 COL16A1Q07092 1604 aaPredicted RBP19.28■□□□□ 0.68
PIKFYVE-206ENST00000443896 SLC4A9Q96Q91 983 aa19.27■□□□□ 0.68
PIKFYVE-206ENST00000443896 DSCC1Q9BVC3 393 aa19.27■□□□□ 0.68
PIKFYVE-206ENST00000443896 CDHR2Q9BYE9 1310 aa19.27■□□□□ 0.68
PIKFYVE-206ENST00000443896 CYP19A1P11511 503 aaPredicted RBP19.27■□□□□ 0.67
PIKFYVE-206ENST00000443896 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.27■□□□□ 0.67
PIKFYVE-206ENST00000443896 AKAP2Q9Y2D5 859 aa19.27■□□□□ 0.67
PIKFYVE-206ENST00000443896 DTNBO60941 627 aa19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 RNF214Q8ND24 703 aa19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 ROBO1Q9Y6N7 1651 aa19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 UBE2HP62256 183 aa19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 HLFQ16534 295 aa19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 TPRNQ4KMQ1 711 aa19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 AHDC1Q5TGY3 1603 aaPredicted RBP19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 PDCP20941 246 aa19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 LARP1BQ659C4 914 aaKnown RBP19.26■□□□□ 0.67
PIKFYVE-206ENST00000443896 PHF14O94880 888 aa19.25■□□□□ 0.67
PIKFYVE-206ENST00000443896 IFIT5Q13325 482 aaKnown RBP19.25■□□□□ 0.67
PIKFYVE-206ENST00000443896 HSP90AB3PQ58FF7 597 aa19.25■□□□□ 0.67
PIKFYVE-206ENST00000443896 NLRP10Q86W26 655 aa19.25■□□□□ 0.67
PIKFYVE-206ENST00000443896 WNK3Q9BYP7 1800 aa19.25■□□□□ 0.67
PIKFYVE-206ENST00000443896 EXOC5O00471 708 aa19.25■□□□□ 0.67
PIKFYVE-206ENST00000443896 RNF113AO15541 343 aaKnown RBP19.25■□□□□ 0.67
PIKFYVE-206ENST00000443896 SLFNL1Q499Z3 407 aa19.25■□□□□ 0.67
PIKFYVE-206ENST00000443896 VPS37CA5D8V6 355 aaPredicted RBP19.24■□□□□ 0.67
PIKFYVE-206ENST00000443896 CSPP1Q1MSJ5 1256 aa19.24■□□□□ 0.67
PIKFYVE-206ENST00000443896 ANKRD36CQ5JPF3 1778 aa19.24■□□□□ 0.67
PIKFYVE-206ENST00000443896 XAGE2Q96GT9 111 aa19.24■□□□□ 0.67
PIKFYVE-206ENST00000443896 MAST3O60307 1309 aa19.24■□□□□ 0.67
PIKFYVE-206ENST00000443896 DNM1Q05193 864 aaKnown RBP19.24■□□□□ 0.67
PIKFYVE-206ENST00000443896 CCDC158Q5M9N0 1113 aa19.24■□□□□ 0.67
PIKFYVE-206ENST00000443896 CCDC94Q9BW85 323 aaPredicted RBP19.24■□□□□ 0.67
PIKFYVE-206ENST00000443896 FIBPO43427 364 aa19.23■□□□□ 0.67
PIKFYVE-206ENST00000443896 HMGB1P09429 215 aaKnown RBP19.23■□□□□ 0.67
PIKFYVE-206ENST00000443896 TAF7LQ5H9L4 462 aa19.23■□□□□ 0.67
PIKFYVE-206ENST00000443896 STOX1Q6ZVD7 989 aa19.23■□□□□ 0.67
PIKFYVE-206ENST00000443896 GTF3C6Q969F1 213 aa19.23■□□□□ 0.67
PIKFYVE-206ENST00000443896 ADORA1P30542 326 aa19.23■□□□□ 0.67
PIKFYVE-206ENST00000443896 Q6ZUG5 572 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms