RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
AC003001.1-201ENST00000443247 JPH1Q9HDC5 661 aaPredicted RBP8.26□□□□□ -1.09
AC003001.1-201ENST00000443247 CCDC87Q9NVE4 849 aa8.26□□□□□ -1.09
AC003001.1-201ENST00000443247 ABI2Q9NYB9 513 aaPredicted RBP8.26□□□□□ -1.09
AC003001.1-201ENST00000443247 TMEM63CQ9P1W3 806 aa8.26□□□□□ -1.09
AC003001.1-201ENST00000443247 K7ELQ4 463 aaPredicted RBP8.25□□□□□ -1.09
AC003001.1-201ENST00000443247 EIF2AK2P19525 551 aaKnown RBP8.25□□□□□ -1.09
AC003001.1-201ENST00000443247 PERM1Q5SV97 790 aa8.25□□□□□ -1.09
AC003001.1-201ENST00000443247 OR13H1Q8NG92 308 aa8.25□□□□□ -1.09
AC003001.1-201ENST00000443247 LPIN3Q9BQK8 851 aa8.25□□□□□ -1.09
AC003001.1-201ENST00000443247 SPDYE3A6NKU9 549 aa8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 LILRB5O75023 590 aa8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 RGS9O75916 674 aaPredicted RBP8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 HOXD8P13378 290 aaPredicted RBP8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 ARHGAP4P98171 946 aa8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 ECM1Q16610 540 aa8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 ELMSAN1Q6PJG2 1045 aa8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 TRAIPQ9BWF2 469 aa8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 GNEQ9Y223 722 aaKnown RBP8.24□□□□□ -1.09
AC003001.1-201ENST00000443247 J3QW42 95 aa8.23□□□□□ -1.09
AC003001.1-201ENST00000443247 USP5P45974 858 aa8.23□□□□□ -1.09
AC003001.1-201ENST00000443247 COL9A3Q14050 684 aaPredicted RBP8.23□□□□□ -1.09
AC003001.1-201ENST00000443247 LOC102724428A0A0B4J2F2 783 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 SOWAHDA6NJG2 315 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 GHRHP01286 108 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 CYP2E1P05181 493 aaPredicted RBP8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 NID1P14543 1247 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 SIK1P57059 783 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 COL13A1Q5TAT6 717 aaPredicted RBP8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 GJD3Q8N144 294 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 SMG9Q9H0W8 520 aaKnown RBP8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 FRRS1LQ9P0K9 344 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 BRPF3Q9ULD4 1205 aa8.22□□□□□ -1.09
AC003001.1-201ENST00000443247 FURINP09958 794 aa8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 SPATA31C1P0DKV0 1188 aa8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 AFF1P51825 1210 aaKnown RBP8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 KCNA1Q09470 495 aa8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 HYAL2Q12891 473 aa8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 PLD4Q96BZ4 506 aa8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 CNTN3Q9P232 1028 aa8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 KANSL3Q9P2N6 904 aa8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 IVNS1ABPQ9Y6Y0 642 aa8.21□□□□□ -1.1
AC003001.1-201ENST00000443247 NDUFB5O43674 189 aa8.2□□□□□ -1.1
AC003001.1-201ENST00000443247 EHHADHQ08426 723 aa8.2□□□□□ -1.1
AC003001.1-201ENST00000443247 PRRT3Q5FWE3 981 aa8.2□□□□□ -1.1
AC003001.1-201ENST00000443247 C1orf127Q8N9H9 656 aa8.2□□□□□ -1.1
AC003001.1-201ENST00000443247 RBSNQ9H1K0 784 aa8.2□□□□□ -1.1
AC003001.1-201ENST00000443247 C1QTNF9BB2RNN3 333 aa8.19□□□□□ -1.1
AC003001.1-201ENST00000443247 SPACA7Q96KW9 195 aa8.19□□□□□ -1.1
AC003001.1-201ENST00000443247 BIN2Q9UBW5 565 aaPredicted RBP8.19□□□□□ -1.1
AC003001.1-201ENST00000443247 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 TNFRSF21O75509 655 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 KIF4AO95239 1232 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 PDIA4P13667 645 aaKnown RBP8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 CES1P23141 567 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 TRIM28Q13263 835 aaKnown RBP8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 GRIK5Q16478 980 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 TRAPPC3LQ5T215 181 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 CD163Q86VB7 1156 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 NCAPG2Q86XI2 1143 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 SNX29Q8TEQ0 813 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 CHRDQ9H2X0 955 aa8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 FOXD3Q9UJU5 478 aaPredicted RBP8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.18□□□□□ -1.1
AC003001.1-201ENST00000443247 PHACTR2O75167 634 aa8.17□□□□□ -1.1
AC003001.1-201ENST00000443247 CHRNA4P43681 627 aa8.17□□□□□ -1.1
AC003001.1-201ENST00000443247 ATP11AP98196 1134 aa8.17□□□□□ -1.1
AC003001.1-201ENST00000443247 TTC9Q92623 222 aa8.17□□□□□ -1.1
AC003001.1-201ENST00000443247 GDF6Q6KF10 455 aaPredicted RBP8.16□□□□□ -1.1
AC003001.1-201ENST00000443247 DMRTC2Q8IXT2 367 aaPredicted RBP8.16□□□□□ -1.1
AC003001.1-201ENST00000443247 TRIM33Q9UPN9 1127 aa8.16□□□□□ -1.1
AC003001.1-201ENST00000443247 EREGO14944 169 aa8.15□□□□□ -1.1
AC003001.1-201ENST00000443247 MSL1Q68DK7 614 aa8.15□□□□□ -1.1
AC003001.1-201ENST00000443247 WFDC8Q8IUA0 241 aa8.15□□□□□ -1.1
AC003001.1-201ENST00000443247 Q8N3U1 123 aa8.15□□□□□ -1.1
AC003001.1-201ENST00000443247 TMC1Q8TDI8 760 aa8.15□□□□□ -1.1
AC003001.1-201ENST00000443247 PMEPA1Q969W9 287 aa8.15□□□□□ -1.1
AC003001.1-201ENST00000443247 RASSF4Q9H2L5 321 aa8.15□□□□□ -1.1
AC003001.1-201ENST00000443247 SALL4Q9UJQ4 1053 aa8.15□□□□□ -1.1
AC003001.1-201ENST00000443247 A0A0A0MRY4 1105 aa8.14□□□□□ -1.11
AC003001.1-201ENST00000443247 APBA3O96018 575 aa8.14□□□□□ -1.11
AC003001.1-201ENST00000443247 ACPPP15309 386 aa8.14□□□□□ -1.11
AC003001.1-201ENST00000443247 PDE3BQ13370 1112 aa8.14□□□□□ -1.11
AC003001.1-201ENST00000443247 CEP135Q66GS9 1140 aa8.14□□□□□ -1.11
AC003001.1-201ENST00000443247 AEBP1Q8IUX7 1158 aa8.14□□□□□ -1.11
AC003001.1-201ENST00000443247 CEP120Q8N960 986 aa8.14□□□□□ -1.11
AC003001.1-201ENST00000443247 FAM129BQ96TA1 746 aa8.14□□□□□ -1.11
AC003001.1-201ENST00000443247 PATL2C9JE40 543 aaKnown RBP8.13□□□□□ -1.11
AC003001.1-201ENST00000443247 SMNDC1O75940 238 aaKnown RBP eCLIP8.13□□□□□ -1.11
AC003001.1-201ENST00000443247 ITGB7P26010 798 aa8.13□□□□□ -1.11
AC003001.1-201ENST00000443247 RAC1P63000 192 aa8.13□□□□□ -1.11
AC003001.1-201ENST00000443247 NACC1Q96RE7 527 aa8.13□□□□□ -1.11
AC003001.1-201ENST00000443247 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
AC003001.1-201ENST00000443247 AMOTL2Q9Y2J4 779 aa8.13□□□□□ -1.11
AC003001.1-201ENST00000443247 GPR182O15218 404 aa8.12□□□□□ -1.11
AC003001.1-201ENST00000443247 ILDR2Q71H61 639 aa8.12□□□□□ -1.11
AC003001.1-201ENST00000443247 IL22RA1Q8N6P7 574 aa8.12□□□□□ -1.11
AC003001.1-201ENST00000443247 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
AC003001.1-201ENST00000443247 LACRTQ9GZZ8 138 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms