RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
CALD1-210ENST00000443197 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 GREM2Q9H772 168 aa12.47□□□□□ -0.41
CALD1-210ENST00000443197 RTCBQ9Y3I0 505 aaKnown RBP12.47□□□□□ -0.41
CALD1-210ENST00000443197 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 C6orf229H3BNL8 230 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 NRDCO43847 1150 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 KINO60870 393 aaKnown RBP12.46□□□□□ -0.41
CALD1-210ENST00000443197 HMGB1P09429 215 aaKnown RBP12.46□□□□□ -0.41
CALD1-210ENST00000443197 SIK1P57059 783 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 ATP2B2Q01814 1243 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 APOBRQ0VD83 1088 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 VPS53Q5VIR6 699 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 FAM173BQ6P4H8 233 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.41
CALD1-210ENST00000443197 AOX1Q06278 1338 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 PDE8AO60658 829 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 TTF1Q15361 905 aaPredicted RBP12.46□□□□□ -0.41
CALD1-210ENST00000443197 KBTBD3Q8NAB2 608 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
CALD1-210ENST00000443197 COPRSQ9NQ92 184 aa12.46□□□□□ -0.41
CALD1-210ENST00000443197 HLFQ16534 295 aa12.46□□□□□ -0.42
CALD1-210ENST00000443197 DZIP1Q86YF9 867 aaKnown RBP12.46□□□□□ -0.42
CALD1-210ENST00000443197 TNMDQ9H2S6 317 aa12.46□□□□□ -0.42
CALD1-210ENST00000443197 KLF18A0A0U1RQI7 1052 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 POLR3DP05423 398 aaPredicted RBP12.45□□□□□ -0.42
CALD1-210ENST00000443197 ZSCAN22P10073 491 aaPredicted RBP12.45□□□□□ -0.42
CALD1-210ENST00000443197 RXRAP19793 462 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 CYP7A1P22680 504 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 DNM1Q05193 864 aaKnown RBP12.45□□□□□ -0.42
CALD1-210ENST00000443197 MAGEB6Q8N7X4 407 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 TRIM34Q9BYJ4 488 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 SLIT1O75093 1534 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 ATP5JP18859 108 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 ADORA1P30542 326 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 TRIM22Q8IYM9 498 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 CDCA7Q9BWT1 371 aaPredicted RBP12.45□□□□□ -0.42
CALD1-210ENST00000443197 UQCRFS1P1P0C7P4 283 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 SYT1P21579 422 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 PI4K2BQ8TCG2 481 aa12.45□□□□□ -0.42
CALD1-210ENST00000443197 ZNF396Q96N95 335 aaPredicted RBP12.45□□□□□ -0.42
CALD1-210ENST00000443197 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
CALD1-210ENST00000443197 USP48Q86UV5 1035 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 CKAP2LQ8IYA6 745 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 NCOA7Q8NI08 942 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 C8orf76Q96K31 380 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 TPM4P67936 248 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 ZBTB38Q8NAP3 1195 aaPredicted RBP12.44□□□□□ -0.42
CALD1-210ENST00000443197 SPC24Q8NBT2 197 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 CCDC34Q96HJ3 373 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 WWC3Q9ULE0 1092 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 UBR1Q8IWV7 1749 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 MAP3K15Q6ZN16 1313 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 ZFYP08048 801 aaPredicted RBP12.44□□□□□ -0.42
CALD1-210ENST00000443197 USP5P45974 858 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 CRKLP46109 303 aaKnown RBP12.44□□□□□ -0.42
CALD1-210ENST00000443197 RBM5P52756 815 aaKnown RBP eCLIP12.44□□□□□ -0.42
CALD1-210ENST00000443197 KLHL40Q2TBA0 621 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 TPTE2Q6XPS3 522 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 ANTXR1Q9H6X2 564 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 SLC4A4Q9Y6R1 1079 aa12.44□□□□□ -0.42
CALD1-210ENST00000443197 SLC3A2P08195 630 aaKnown RBP12.44□□□□□ -0.42
CALD1-210ENST00000443197 NSFL1CQ9UNZ2 370 aaKnown RBP12.44□□□□□ -0.42
CALD1-210ENST00000443197 SNAP23O00161 211 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 PES1O00541 588 aaKnown RBP12.43□□□□□ -0.42
CALD1-210ENST00000443197 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 SMIM5Q71RC9 77 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 ORC3Q9UBD5 711 aaPredicted RBP12.43□□□□□ -0.42
CALD1-210ENST00000443197 CFAP45Q9UL16 551 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 USP32Q8NFA0 1604 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 MCM5P33992 734 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
CALD1-210ENST00000443197 NCOA5Q9HCD5 579 aaKnown RBP12.43□□□□□ -0.42
CALD1-210ENST00000443197 SLC12A7Q9Y666 1083 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 CTSWP56202 376 aa12.43□□□□□ -0.42
CALD1-210ENST00000443197 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.43□□□□□ -0.42
CALD1-210ENST00000443197 XBP1P17861 261 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 NUP62CLQ9H1M0 184 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 ERBB4Q15303 1308 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 PRC1O43663 620 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 PCCAP05165 728 aaPredicted RBP12.42□□□□□ -0.42
CALD1-210ENST00000443197 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 TRIM5Q9C035 493 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 KCNQ2O43526 872 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
CALD1-210ENST00000443197 ZSCAN23Q3MJ62 389 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 ZKSCAN3Q9BRR0 538 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
CALD1-210ENST00000443197 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
CALD1-210ENST00000443197 KDM4FA0A1W2PPD8 638 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 DHX32Q7L7V1 743 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms