RNA–Protein interactions for RNA: ENST00000442895.6

NUP35-204, Transcript of nucleoporin 35, humanhuman

TSL 4

Gene NUP35, Length 616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-204ENST00000442895 USP6P35125 1406 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 EDC4Q6P2E9 1401 aaKnown RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 POLR3AO14802 1390 aaPredicted RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 MYBBP1AQ9BQG0 1328 aaKnown RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 WASLO00401 505 aaPredicted RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 CAPN5O15484 640 aaPredicted RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 VAC14Q08AM6 782 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 SEMA3FQ13275 785 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 B4GALNT3Q6L9W6 998 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 SVOPQ8N4V2 548 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 HELBQ8NG08 1087 aaPredicted RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 TSC1Q92574 1164 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 SCARF2Q96GP6 870 aaPredicted RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 GJD4Q96KN9 370 aaPredicted RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 SPOCK3Q9BQ16 436 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 MYH16Q9H6N6 1097 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 TMEM134Q9H6X4 195 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 FAM13BQ9NYF5 915 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 TFIP11Q9UBB9 837 aaKnown RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 KIF3AQ9Y496 699 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 SIPA1L3O60292 1781 aaPredicted RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 LMO7Q8WWI1 1683 aa5.33□□□□□ -1.56
NUP35-204ENST00000442895 FAM208AQ9UK61 1670 aaKnown RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 MED1Q15648 1581 aaPredicted RBP5.33□□□□□ -1.56
NUP35-204ENST00000442895 ANKARQ7Z5J8 1434 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 ROBO1Q9Y6N7 1651 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 PALM3A6NDB9 673 aaPredicted RBP5.32□□□□□ -1.56
NUP35-204ENST00000442895 SOX11P35716 441 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 GCGRP47871 477 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 RIPK4P57078 832 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 SRPK2P78362 688 aaKnown RBP5.32□□□□□ -1.56
NUP35-204ENST00000442895 CCDC27Q2M243 656 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 CDCA8Q53HL2 280 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 MYCBPQ99417 103 aaPredicted RBP5.32□□□□□ -1.56
NUP35-204ENST00000442895 TERF2IPQ9NYB0 399 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 EID1Q9Y6B2 187 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 LRRC37A3O60309 1634 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 SLIT3O75094 1523 aa5.32□□□□□ -1.56
NUP35-204ENST00000442895 MST1RQ04912 1400 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 FSD2A1L4K1 749 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 NRDCO43847 1150 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 PPP2R1AP30153 589 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 MAP2K1Q02750 393 aaPredicted RBP5.31□□□□□ -1.56
NUP35-204ENST00000442895 MTMR2Q13614 643 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 NBPF6Q5VWK0 638 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 NBPF10Q6P3W6 841 aaKnown RBP5.31□□□□□ -1.56
NUP35-204ENST00000442895 NBPF5PQ86XG9 351 aaPredicted RBP5.31□□□□□ -1.56
NUP35-204ENST00000442895 ANKLE2Q86XL3 938 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.31□□□□□ -1.56
NUP35-204ENST00000442895 ADAMTS19Q8TE59 1207 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 PNISRQ8TF01 805 aaKnown RBP5.31□□□□□ -1.56
NUP35-204ENST00000442895 ZNF526Q8TF50 670 aaPredicted RBP5.31□□□□□ -1.56
NUP35-204ENST00000442895 ZNF428Q96B54 188 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 NBPF4Q96M43 638 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 ZFP42Q96MM3 310 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 TIGD1Q96MW7 591 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 BACH2Q9BYV9 841 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 ALG2Q9H553 416 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 CABP1Q9NZU7 370 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 POGKQ9P215 609 aa5.31□□□□□ -1.56
NUP35-204ENST00000442895 CGNQ9P2M7 1197 aaKnown RBP5.31□□□□□ -1.56
NUP35-204ENST00000442895 NSD2O96028 1365 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 COL16A1Q07092 1604 aaPredicted RBP5.3□□□□□ -1.56
NUP35-204ENST00000442895 GOLIM4O00461 696 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 FYB1O15117 783 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 KIF1CO43896 1103 aaKnown RBP5.3□□□□□ -1.56
NUP35-204ENST00000442895 ZKSCAN8Q15776 578 aaPredicted RBP5.3□□□□□ -1.56
NUP35-204ENST00000442895 PLA2G4EQ3MJ16 856 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 CREBRFQ8IUR6 639 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 OTUD6BQ8N6M0 293 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 MNS1Q8NEH6 495 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 NUDT16Q96DE0 195 aaKnown RBP5.3□□□□□ -1.56
NUP35-204ENST00000442895 BRMS1Q9HCU9 246 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 MRS2Q9HD23 443 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 CALCOCO1Q9P1Z2 691 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 SH3BP1Q9Y3L3 701 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 CEP83Q9Y592 693 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 IVNS1ABPQ9Y6Y0 642 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 C1orf167Q5SNV9 1468 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 PXDNQ92626 1479 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 CDK12Q9NYV4 1490 aaPredicted RBP5.3□□□□□ -1.56
NUP35-204ENST00000442895 DCCP43146 1447 aa5.3□□□□□ -1.56
NUP35-204ENST00000442895 COL22A1Q8NFW1 1626 aaPredicted RBP5.3□□□□□ -1.56
NUP35-204ENST00000442895 SCN11AQ9UI33 1791 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 PKD1L3Q7Z443 1732 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 PLCH1Q4KWH8 1693 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 SENP3-EIF4A1A0A087X0R7 540 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 CARNS1A5YM72 827 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 C6orf229H3BNL8 230 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 HOXA2O43364 376 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 FRAT2O75474 233 aaPredicted RBP5.29□□□□□ -1.56
NUP35-204ENST00000442895 ATG7O95352 703 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 ALDH1A1P00352 501 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 XRCC6P12956 609 aaKnown RBP eCLIP5.29□□□□□ -1.56
NUP35-204ENST00000442895 FBLN1P23142 703 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 MSNP26038 577 aaKnown RBP5.29□□□□□ -1.56
NUP35-204ENST00000442895 GABPB1Q06547 395 aaPredicted RBP5.29□□□□□ -1.56
NUP35-204ENST00000442895 BECN1Q14457 450 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 HSP90AB4PQ58FF6 505 aa5.29□□□□□ -1.56
NUP35-204ENST00000442895 NLRP13Q86W25 1043 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms