RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 WDR33Q9C0J8 1336 aaKnown RBP9.3□□□□□ -0.92
RFX3-206ENST00000442560 KDM3BQ7LBC6 1761 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 TRAF5O00463 557 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 BBOX1O75936 387 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 CXCL9Q07325 125 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 DDX10Q13206 875 aaKnown RBP9.29□□□□□ -0.92
RFX3-206ENST00000442560 VARS2Q5ST30 1063 aaKnown RBP9.29□□□□□ -0.92
RFX3-206ENST00000442560 DPP8Q6V1X1 898 aaPredicted RBP9.29□□□□□ -0.92
RFX3-206ENST00000442560 PAXIP1Q6ZW49 1069 aaPredicted RBP9.29□□□□□ -0.92
RFX3-206ENST00000442560 DDX46Q7L014 1031 aaKnown RBP9.29□□□□□ -0.92
RFX3-206ENST00000442560 SP8Q8IXZ3 490 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 MPNDQ8N594 471 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 SUPT20HQ8NEM7 779 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 VPS33BQ9H267 617 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 PRDM10Q9NQV6 1147 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 ZNRF3Q9ULT6 936 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
RFX3-206ENST00000442560 CHL1O00533 1208 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 HOXB1P14653 301 aaPredicted RBP9.28□□□□□ -0.92
RFX3-206ENST00000442560 GMPSP49915 693 aaPredicted RBP9.28□□□□□ -0.92
RFX3-206ENST00000442560 LBX1P52954 281 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 GRM1Q13255 1194 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 GRAPQ13588 217 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 HDGFL1Q5TGJ6 251 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 CYP4F22Q6NT55 531 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 GRAPLQ8TC17 118 aaPredicted RBP9.28□□□□□ -0.92
RFX3-206ENST00000442560 RTFDC1Q9BY42 306 aaPredicted RBP9.28□□□□□ -0.92
RFX3-206ENST00000442560 ADARB2Q9NS39 739 aaKnown RBP9.28□□□□□ -0.92
RFX3-206ENST00000442560 GPRC5DQ9NZD1 345 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 CHPF2Q9P2E5 772 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 SCN4AP35499 1836 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 SH3TC1Q8TE82 1336 aa9.28□□□□□ -0.92
RFX3-206ENST00000442560 RAD17O75943 681 aa9.27□□□□□ -0.93
RFX3-206ENST00000442560 HSPA8P11142 646 aaKnown RBP9.27□□□□□ -0.93
RFX3-206ENST00000442560 KIAA2012Q0VF49 1180 aa9.27□□□□□ -0.93
RFX3-206ENST00000442560 WDR43Q15061 677 aaKnown RBP eCLIP9.27□□□□□ -0.93
RFX3-206ENST00000442560 CST9Q5W186 159 aa9.27□□□□□ -0.93
RFX3-206ENST00000442560 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
RFX3-206ENST00000442560 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
RFX3-206ENST00000442560 RUNDC1Q96C34 613 aa9.27□□□□□ -0.93
RFX3-206ENST00000442560 BCL2L13Q9BXK5 485 aa9.27□□□□□ -0.93
RFX3-206ENST00000442560 MYBBP1AQ9BQG0 1328 aaKnown RBP9.27□□□□□ -0.93
RFX3-206ENST00000442560 ADAMTSL1Q8N6G6 1762 aa9.27□□□□□ -0.93
RFX3-206ENST00000442560 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
RFX3-206ENST00000442560 ECE1P42892 770 aa9.26□□□□□ -0.93
RFX3-206ENST00000442560 MAP2K1Q02750 393 aaPredicted RBP9.26□□□□□ -0.93
RFX3-206ENST00000442560 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
RFX3-206ENST00000442560 ANKRD13DQ6ZTN6 518 aa9.26□□□□□ -0.93
RFX3-206ENST00000442560 FAM89AQ96GI7 184 aa9.26□□□□□ -0.93
RFX3-206ENST00000442560 CAPNS2Q96L46 248 aa9.26□□□□□ -0.93
RFX3-206ENST00000442560 GLIS2Q9BZE0 524 aaPredicted RBP9.26□□□□□ -0.93
RFX3-206ENST00000442560 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
RFX3-206ENST00000442560 TLL2Q9Y6L7 1015 aa9.26□□□□□ -0.93
RFX3-206ENST00000442560 LTBP1Q14766 1721 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 SHTN1A0MZ66 631 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 YDJCA8MPS7 323 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 RIMBP2O15034 1052 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 CELF2O95319 508 aaKnown RBP9.25□□□□□ -0.93
RFX3-206ENST00000442560 HIRAP54198 1017 aaPredicted RBP9.25□□□□□ -0.93
RFX3-206ENST00000442560 TNIP1Q15025 636 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 DOK7Q18PE1 504 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 PLBD2Q8NHP8 589 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 TRPM4Q8TD43 1214 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 CELF1Q92879 486 aaKnown RBP9.25□□□□□ -0.93
RFX3-206ENST00000442560 GPR101Q96P66 508 aaPredicted RBP9.25□□□□□ -0.93
RFX3-206ENST00000442560 ISCA1Q9BUE6 129 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 ZNF408Q9H9D4 720 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
RFX3-206ENST00000442560 CNOT7Q9UIV1 285 aaKnown RBP9.25□□□□□ -0.93
RFX3-206ENST00000442560 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
RFX3-206ENST00000442560 NUP98P52948 1817 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 DLG5Q8TDM6 1919 aa9.25□□□□□ -0.93
RFX3-206ENST00000442560 C6orf229H3BNL8 230 aa9.24□□□□□ -0.93
RFX3-206ENST00000442560 AOC2O75106 756 aa9.24□□□□□ -0.93
RFX3-206ENST00000442560 HOXB7P09629 217 aa9.24□□□□□ -0.93
RFX3-206ENST00000442560 SF3B3Q15393 1217 aaKnown RBP9.24□□□□□ -0.93
RFX3-206ENST00000442560 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
RFX3-206ENST00000442560 EFCAB3Q8N7B9 438 aa9.24□□□□□ -0.93
RFX3-206ENST00000442560 CFAP44Q96MT7 982 aa9.24□□□□□ -0.93
RFX3-206ENST00000442560 H7C1D1 291 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 ELL2O00472 640 aaPredicted RBP9.23□□□□□ -0.93
RFX3-206ENST00000442560 IRS4O14654 1257 aaPredicted RBP9.23□□□□□ -0.93
RFX3-206ENST00000442560 GPSM2P81274 684 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 WASHC4Q2M389 1173 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 DLK2Q6UY11 383 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 CDC37L1Q7L3B6 337 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 TMC4Q7Z404 712 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 RIC3Q7Z5B4 369 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 SAPCD2Q86UD0 394 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 MICALL2Q8IY33 904 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 BEGAINQ9BUH8 593 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 DBNDD1Q9H9R9 158 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 MBIPQ9NS73 344 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 PGAP2Q9UHJ9 254 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 TSKSQ9UJT2 592 aa9.23□□□□□ -0.93
RFX3-206ENST00000442560 PSMD14O00487 310 aa9.22□□□□□ -0.93
RFX3-206ENST00000442560 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
RFX3-206ENST00000442560 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
RFX3-206ENST00000442560 USP48Q86UV5 1035 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms