RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 UNC13BO14795 1591 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 FAM135BQ49AJ0 1406 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 KNDC1Q76NI1 1749 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 FBXO18Q8NFZ0 1043 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 COG3Q96JB2 828 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 IRX2Q9BZI1 471 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-214ENST00000441542 STRCQ7RTU9 1775 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 ABCA6Q8N139 1617 aa8.74□□□□□ -1.01
HDAC9-214ENST00000441542 ADGRB2O60241 1585 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 PLCH2O75038 1416 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 KIF2AO00139 706 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 ZRANB2O95218 330 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 PPP2R3AQ06190 1150 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 REXO1L1PQ8IX06 675 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 RUFY2Q8WXA3 655 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 LTV1Q96GA3 475 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 FSD1Q9BTV5 496 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 PHAXQ9H814 394 aaKnown RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 CFAP65Q6ZU64 1925 aaKnown RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 EIF3CLB5ME19 914 aaKnown RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 TADA3O75528 432 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 CHGBP05060 677 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 GSDMDP57764 484 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 NMIQ13287 307 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 CCDC30Q5VVM6 783 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 CHST3Q7LGC8 479 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 NBPF11Q86T75 865 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 GOLGA5Q8TBA6 731 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 PI4K2BQ8TCG2 481 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 USP28Q96RU2 1077 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 WDR24Q96S15 920 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 EIF3CQ99613 913 aaKnown RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 CDC42BPBQ9Y5S2 1711 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 SALL3Q9BXA9 1300 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 ACTN2P35609 894 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 LONRF2Q1L5Z9 754 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 AACSQ86V21 672 aa8.73□□□□□ -1.01
HDAC9-214ENST00000441542 MYCBPQ99417 103 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 NCOA5Q9HCD5 579 aaKnown RBP8.73□□□□□ -1.01
HDAC9-214ENST00000441542 FANCGO15287 622 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 NBPF7P0C2Y1 421 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-214ENST00000441542 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 CCDC12Q8WUD4 166 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-214ENST00000441542 DPF2Q92785 391 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 SLC26A8Q96RN1 970 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 L2HGDHQ9H9P8 463 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 LZTFL1Q9NQ48 299 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 SBNO2Q9Y2G9 1366 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 CHL1O00533 1208 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 LIG3P49916 1009 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 MNAT1P51948 309 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 HSP90AB2PQ58FF8 381 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 CREBRFQ8IUR6 639 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 CPLX3Q8WVH0 158 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 NAT10Q9H0A0 1025 aaKnown RBP8.72□□□□□ -1.01
HDAC9-214ENST00000441542 ZSWIM6Q9HCJ5 1215 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 TRPM2O94759 1503 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 TTC21AQ8NDW8 1320 aa8.72□□□□□ -1.01
HDAC9-214ENST00000441542 TMEM232C9JQI7 657 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 SLC27A2O14975 620 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 CDC25BP30305 580 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 MUM1L1Q5H9M0 696 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 CCDC129Q6ZRS4 1044 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 DHX58Q96C10 678 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 USP44Q9H0E7 712 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 BICC1Q9H694 974 aaKnown RBP8.71□□□□□ -1.01
HDAC9-214ENST00000441542 STAP2Q9UGK3 403 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 MTMR7Q9Y216 660 aa8.71□□□□□ -1.01
HDAC9-214ENST00000441542 HSP90B2PQ58FF3 399 aa8.71□□□□□ -1.02
HDAC9-214ENST00000441542 CLASRPQ8N2M8 674 aaKnown RBP8.71□□□□□ -1.02
HDAC9-214ENST00000441542 ADKP55263 362 aaKnown RBP8.71□□□□□ -1.02
HDAC9-214ENST00000441542 LRRFIP1Q32MZ4 808 aaKnown RBP8.71□□□□□ -1.02
HDAC9-214ENST00000441542 DNAJC21Q5F1R6 531 aaKnown RBP8.71□□□□□ -1.02
HDAC9-214ENST00000441542 CCDC150Q8NCX0 1101 aa8.71□□□□□ -1.02
HDAC9-214ENST00000441542 CFAP45Q9UL16 551 aa8.71□□□□□ -1.02
HDAC9-214ENST00000441542 COL3A1P02461 1466 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-214ENST00000441542 YEATS2Q9ULM3 1422 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 A0A0D9SFI3 127 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 ECM2O94769 699 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-214ENST00000441542 UBASH3AP57075 661 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 FANCCQ00597 558 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 IDI1Q13907 227 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 STK38Q15208 465 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 CCDC93Q567U6 631 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 HSP90AB4PQ58FF6 505 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 JAKMIP3Q5VZ66 844 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 Q6ZUG5 572 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 TOP1P11387 765 aaKnown RBP8.7□□□□□ -1.02
HDAC9-214ENST00000441542 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 PSMA5P28066 241 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 MARCKSP29966 332 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-214ENST00000441542 MTX1Q13505 466 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 EIF4A2Q14240 407 aaKnown RBP8.7□□□□□ -1.02
HDAC9-214ENST00000441542 TAF7Q15545 349 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-214ENST00000441542 CT47A1Q5JQC4 288 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-214ENST00000441542 FKBP15Q5T1M5 1219 aa8.7□□□□□ -1.02
HDAC9-214ENST00000441542 TTC19Q6DKK2 380 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-214ENST00000441542 SARM1Q6SZW1 724 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms