RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 COL13A1Q5TAT6 717 aaPredicted RBP8.47□□□□□ -1.05
PFDN4-202ENST00000441080 NCAPG2Q86XI2 1143 aa8.47□□□□□ -1.05
PFDN4-202ENST00000441080 ELOA3Q8NG57 546 aa8.47□□□□□ -1.05
PFDN4-202ENST00000441080 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
PFDN4-202ENST00000441080 BCL2L13Q9BXK5 485 aa8.47□□□□□ -1.05
PFDN4-202ENST00000441080 SLC6A14Q9UN76 642 aa8.47□□□□□ -1.05
PFDN4-202ENST00000441080 KIF4AO95239 1232 aa8.46□□□□□ -1.06
PFDN4-202ENST00000441080 POLR3DP05423 398 aaPredicted RBP8.46□□□□□ -1.06
PFDN4-202ENST00000441080 EPXP11678 715 aa8.46□□□□□ -1.06
PFDN4-202ENST00000441080 ALAS2P22557 587 aa8.46□□□□□ -1.06
PFDN4-202ENST00000441080 HFE2Q6ZVN8 426 aa8.46□□□□□ -1.06
PFDN4-202ENST00000441080 FBXO33Q7Z6M2 555 aa8.46□□□□□ -1.06
PFDN4-202ENST00000441080 FAM35AQ86V20 835 aa8.46□□□□□ -1.06
PFDN4-202ENST00000441080 SPACA7Q96KW9 195 aa8.46□□□□□ -1.06
PFDN4-202ENST00000441080 MDFIQ99750 246 aa8.46□□□□□ -1.06
PFDN4-202ENST00000441080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.46□□□□□ -1.06
PFDN4-202ENST00000441080 LOC102724428A0A0B4J2F2 783 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 J3QW42 95 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 OIP5O43482 229 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 BCRP11274 1271 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 EDN3P14138 238 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 CPB1P15086 417 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
PFDN4-202ENST00000441080 SIK1P57059 783 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 GALNT6Q8NCL4 622 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 GIPC2Q8TF65 315 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 EDARADDQ8WWZ3 215 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 CCDC74AQ96AQ1 378 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 SETDB2Q96T68 719 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 SALL4Q9UJQ4 1053 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
PFDN4-202ENST00000441080 PRPF40AO75400 957 aaKnown RBP8.44□□□□□ -1.06
PFDN4-202ENST00000441080 GHRHP01286 108 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 CELA2BP08218 269 aaPredicted RBP8.44□□□□□ -1.06
PFDN4-202ENST00000441080 FGD1P98174 961 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 ALG1LQ6GMV1 187 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 LYPD4Q6UWN0 246 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 C1orf229Q6ZS94 237 aaPredicted RBP8.44□□□□□ -1.06
PFDN4-202ENST00000441080 GALNT12Q8IXK2 581 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 FBF1Q8TES7 1133 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 RBSNQ9H1K0 784 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 NPHS2Q9NP85 383 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 NAGPAQ9UK23 515 aa8.44□□□□□ -1.06
PFDN4-202ENST00000441080 WIPF1O43516 503 aa8.43□□□□□ -1.06
PFDN4-202ENST00000441080 MAP3K10Q02779 954 aa8.43□□□□□ -1.06
PFDN4-202ENST00000441080 WHAMMQ8TF30 809 aa8.43□□□□□ -1.06
PFDN4-202ENST00000441080 ZNF326Q5BKZ1 582 aaKnown RBP8.42□□□□□ -1.06
PFDN4-202ENST00000441080 SVOPQ8N4V2 548 aa8.42□□□□□ -1.06
PFDN4-202ENST00000441080 CEP120Q8N960 986 aa8.42□□□□□ -1.06
PFDN4-202ENST00000441080 LATS2Q9NRM7 1088 aa8.42□□□□□ -1.06
PFDN4-202ENST00000441080 LRRC4BQ9NT99 713 aa8.42□□□□□ -1.06
PFDN4-202ENST00000441080 NLRP2Q9NX02 1062 aa8.42□□□□□ -1.06
PFDN4-202ENST00000441080 SHISA8B8ZZ34 492 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 ACPPP15309 386 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 AMPD1P23109 780 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 IRS1P35568 1242 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 TAGLNQ01995 201 aaKnown RBP8.41□□□□□ -1.06
PFDN4-202ENST00000441080 PERM1Q5SV97 790 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
PFDN4-202ENST00000441080 PSAPL1Q6NUJ1 521 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 ELMSAN1Q6PJG2 1045 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 CHSY3Q70JA7 882 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 MICALL1Q8N3F8 863 aa8.41□□□□□ -1.06
PFDN4-202ENST00000441080 EPS8L3Q8TE67 593 aaKnown RBP8.41□□□□□ -1.06
PFDN4-202ENST00000441080 RBM47A0AV96 593 aaKnown RBP8.4□□□□□ -1.06
PFDN4-202ENST00000441080 GADD45BO75293 160 aaPredicted RBP8.4□□□□□ -1.06
PFDN4-202ENST00000441080 ATP11AP98196 1134 aa8.4□□□□□ -1.06
PFDN4-202ENST00000441080 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.4□□□□□ -1.06
PFDN4-202ENST00000441080 PEAR1Q5VY43 1037 aaPredicted RBP8.4□□□□□ -1.06
PFDN4-202ENST00000441080 PI16Q6UXB8 463 aa8.4□□□□□ -1.06
PFDN4-202ENST00000441080 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
PFDN4-202ENST00000441080 OSMRQ99650 979 aa8.4□□□□□ -1.06
PFDN4-202ENST00000441080 DUSP9Q99956 384 aaKnown RBP8.4□□□□□ -1.06
PFDN4-202ENST00000441080 LPIN3Q9BQK8 851 aa8.4□□□□□ -1.06
PFDN4-202ENST00000441080 ZKSCAN3Q9BRR0 538 aa8.4□□□□□ -1.06
PFDN4-202ENST00000441080 SMG9Q9H0W8 520 aaKnown RBP8.4□□□□□ -1.06
PFDN4-202ENST00000441080 RASSF4Q9H2L5 321 aa8.4□□□□□ -1.06
PFDN4-202ENST00000441080 FRRS1LQ9P0K9 344 aa8.4□□□□□ -1.06
PFDN4-202ENST00000441080 A0A1W2PP55 124 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 ZNF16P17020 682 aaPredicted RBP8.39□□□□□ -1.07
PFDN4-202ENST00000441080 KIAA0319Q5VV43 1072 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 KANK3Q6NY19 840 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 NUDT8Q8WV74 236 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 BTBD6Q96KE9 485 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 PBX4Q9BYU1 374 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 EHD4Q9H223 541 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 DZANK1Q9NVP4 752 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 STARD13Q9Y3M8 1113 aa8.39□□□□□ -1.07
PFDN4-202ENST00000441080 TRPA1O75762 1119 aa8.38□□□□□ -1.07
PFDN4-202ENST00000441080 RGS9O75916 674 aaPredicted RBP8.38□□□□□ -1.07
PFDN4-202ENST00000441080 SMNDC1O75940 238 aaKnown RBP eCLIP8.38□□□□□ -1.07
PFDN4-202ENST00000441080 ALBP02768 609 aa8.38□□□□□ -1.07
PFDN4-202ENST00000441080 XPCQ01831 940 aaPredicted RBP8.38□□□□□ -1.07
PFDN4-202ENST00000441080 CEP135Q66GS9 1140 aa8.38□□□□□ -1.07
PFDN4-202ENST00000441080 NEDD1Q8NHV4 660 aa8.38□□□□□ -1.07
PFDN4-202ENST00000441080 JPH1Q9HDC5 661 aaPredicted RBP8.38□□□□□ -1.07
PFDN4-202ENST00000441080 ENAMQ9NRM1 1142 aa8.38□□□□□ -1.07
PFDN4-202ENST00000441080 PARP2Q9UGN5 583 aa8.38□□□□□ -1.07
PFDN4-202ENST00000441080 SPG7Q9UQ90 795 aa8.38□□□□□ -1.07
PFDN4-202ENST00000441080 GNA15P30679 374 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms