RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CKAP2LQ8IYA6 745 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 TM6SF1Q9BZW5 370 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
LTBR-203ENST00000441074 NRAPQ86VF7 1730 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 CAVIN2O95810 425 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 PI4K2BQ8TCG2 481 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 ZNF592Q92610 1267 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 DACT1Q9NYF0 836 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 OVOS2A0A0G2JMS6 1433 aa14□□□□□ -0.17
LTBR-203ENST00000441074 HOXB7P09629 217 aa14□□□□□ -0.17
LTBR-203ENST00000441074 PDIA6Q15084 440 aa14□□□□□ -0.17
LTBR-203ENST00000441074 CCDC144BQ3MJ40 725 aa14□□□□□ -0.17
LTBR-203ENST00000441074 POTEAQ6S8J7 498 aa14□□□□□ -0.17
LTBR-203ENST00000441074 NYAP1Q6ZVC0 841 aa14□□□□□ -0.17
LTBR-203ENST00000441074 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
LTBR-203ENST00000441074 CCDC144CPQ8IYA2 1237 aa14□□□□□ -0.17
LTBR-203ENST00000441074 RHPN1Q8TCX5 695 aa14□□□□□ -0.17
LTBR-203ENST00000441074 IPO4Q8TEX9 1081 aaKnown RBP14□□□□□ -0.17
LTBR-203ENST00000441074 GJD4Q96KN9 370 aaPredicted RBP14□□□□□ -0.17
LTBR-203ENST00000441074 SPATA31A5Q5VU36 1347 aa14□□□□□ -0.17
LTBR-203ENST00000441074 SPATA31A7Q8IWB4 1347 aa14□□□□□ -0.17
LTBR-203ENST00000441074 USP42Q9H9J4 1324 aaKnown RBP14□□□□□ -0.17
LTBR-203ENST00000441074 NBPF7P0C2Y1 421 aaPredicted RBP13.99□□□□□ -0.17
LTBR-203ENST00000441074 CPA1P15085 419 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 ZNF165P49910 485 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 PTPN14Q15678 1187 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 RNF20Q5VTR2 975 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
LTBR-203ENST00000441074 LRRC8AQ8IWT6 810 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 SCAND2PQ9GZW5 306 aaPredicted RBP13.99□□□□□ -0.17
LTBR-203ENST00000441074 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 IL1RAPL2Q9NP60 686 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 CHMP3Q9Y3E7 222 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 SPATA31A1Q5TZJ5 1347 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 SURF6O75683 361 aaKnown RBP13.99□□□□□ -0.17
LTBR-203ENST00000441074 MAP4K4O95819 1239 aaPredicted RBP13.99□□□□□ -0.17
LTBR-203ENST00000441074 ST3GAL1Q11201 340 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 CWF19L2Q2TBE0 894 aaKnown RBP13.99□□□□□ -0.17
LTBR-203ENST00000441074 FBXO38Q6PIJ6 1188 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 PPP1R42Q7Z4L9 355 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 TTC5Q8N0Z6 440 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 KCNB2Q92953 911 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 DBF4Q9UBU7 674 aaPredicted RBP13.99□□□□□ -0.17
LTBR-203ENST00000441074 CYP46A1Q9Y6A2 500 aa13.99□□□□□ -0.17
LTBR-203ENST00000441074 GOLGA6L4A6NEF3 574 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 TULP2O00295 520 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 ATRNO75882 1429 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 PDCP20941 246 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 TTC41PQ6P2S7 1318 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 SARM1Q6SZW1 724 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 DNAJC2Q99543 621 aaKnown RBP13.98□□□□□ -0.17
LTBR-203ENST00000441074 HEG1Q9ULI3 1381 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 MAP3K2Q9Y2U5 619 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
LTBR-203ENST00000441074 FAM98CQ17RN3 349 aaKnown RBP13.98□□□□□ -0.17
LTBR-203ENST00000441074 JAKMIP1Q96N16 626 aaKnown RBP13.98□□□□□ -0.17
LTBR-203ENST00000441074 ADCY9O60503 1353 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 SLU7O95391 586 aaKnown RBP13.97□□□□□ -0.17
LTBR-203ENST00000441074 ME3Q16798 604 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 RUFY2Q8WXA3 655 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 DNAAF4Q8WXU2 420 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 MRFAP1L1Q96HT8 127 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 KCND1Q9NSA2 647 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 GLRX3O76003 335 aaKnown RBP13.97□□□□□ -0.17
LTBR-203ENST00000441074 ELF2Q15723 593 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 CWC27Q6UX04 472 aaKnown RBP13.97□□□□□ -0.17
LTBR-203ENST00000441074 SPATA32Q96LK8 384 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 DNAJC25Q9H1X3 360 aa13.97□□□□□ -0.17
LTBR-203ENST00000441074 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.96□□□□□ -0.17
LTBR-203ENST00000441074 USP27XA6NNY8 438 aa13.96□□□□□ -0.17
LTBR-203ENST00000441074 KIF2AO00139 706 aaPredicted RBP13.96□□□□□ -0.17
LTBR-203ENST00000441074 SRGAP3O43295 1099 aa13.96□□□□□ -0.17
LTBR-203ENST00000441074 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
LTBR-203ENST00000441074 ADCK5Q3MIX3 580 aa13.96□□□□□ -0.17
LTBR-203ENST00000441074 BEND3Q5T5X7 828 aa13.96□□□□□ -0.17
LTBR-203ENST00000441074 CDC37L1Q7L3B6 337 aa13.96□□□□□ -0.17
LTBR-203ENST00000441074 A0A0G2JS52 829 aa13.96□□□□□ -0.18
LTBR-203ENST00000441074 VGLL3A8MV65 326 aa13.96□□□□□ -0.18
LTBR-203ENST00000441074 SKILP12757 684 aa13.96□□□□□ -0.18
LTBR-203ENST00000441074 RXRBP28702 533 aa13.96□□□□□ -0.18
LTBR-203ENST00000441074 LEO1Q8WVC0 666 aaPredicted RBP13.96□□□□□ -0.18
LTBR-203ENST00000441074 KDM3BQ7LBC6 1761 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 DTNBO60941 627 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 COPS6Q7L5N1 327 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 FERMT3Q86UX7 667 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 XAGE3Q8WTP9 111 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 SYTL4Q96C24 671 aaPredicted RBP13.95□□□□□ -0.18
LTBR-203ENST00000441074 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.95□□□□□ -0.18
LTBR-203ENST00000441074 V9GYY5 206 aaPredicted RBP13.95□□□□□ -0.18
LTBR-203ENST00000441074 ERICH4A6NGS2 130 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 CYP2C19P33261 490 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 IQCB1Q15051 598 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 PRPF40BQ6NWY9 871 aaKnown RBP13.95□□□□□ -0.18
LTBR-203ENST00000441074 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 GPATCH3Q96I76 525 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 NOL10Q9BSC4 688 aaKnown RBP13.95□□□□□ -0.18
LTBR-203ENST00000441074 TSPYL1Q9H0U9 437 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms