RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 GOLGA2Q08379 1002 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 PROSER3Q2NL68 480 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 C2orf69Q8N8R5 385 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 ZBTB38Q8NAP3 1195 aaPredicted RBP7.73□□□□□ -1.17
PTPRR-204ENST00000440835 MYH3P11055 1940 aa7.72□□□□□ -1.17
PTPRR-204ENST00000440835 PAPPA2Q9BXP8 1791 aa7.72□□□□□ -1.17
PTPRR-204ENST00000440835 PCCAP05165 728 aaPredicted RBP7.72□□□□□ -1.17
PTPRR-204ENST00000440835 VIL1P09327 827 aaKnown RBP7.72□□□□□ -1.17
PTPRR-204ENST00000440835 ZNF853P0CG23 659 aa7.72□□□□□ -1.17
PTPRR-204ENST00000440835 HCLS1P14317 486 aaPredicted RBP7.72□□□□□ -1.17
PTPRR-204ENST00000440835 RPS8P62241 208 aaKnown RBP7.72□□□□□ -1.17
PTPRR-204ENST00000440835 CCDC152Q4G0S7 254 aa7.72□□□□□ -1.17
PTPRR-204ENST00000440835 DCPSQ96C86 337 aaKnown RBP7.72□□□□□ -1.17
PTPRR-204ENST00000440835 TRIM35Q9UPQ4 493 aa7.72□□□□□ -1.17
PTPRR-204ENST00000440835 CYP4F22Q6NT55 531 aa7.72□□□□□ -1.17
PTPRR-204ENST00000440835 MICALL2Q8IY33 904 aa7.72□□□□□ -1.17
PTPRR-204ENST00000440835 CHPF2Q9P2E5 772 aa7.72□□□□□ -1.17
PTPRR-204ENST00000440835 YDJCA8MPS7 323 aa7.71□□□□□ -1.17
PTPRR-204ENST00000440835 ZNF280AP59817 542 aaPredicted RBP7.71□□□□□ -1.17
PTPRR-204ENST00000440835 NOM1Q5C9Z4 860 aaKnown RBP7.71□□□□□ -1.17
PTPRR-204ENST00000440835 PAXIP1Q6ZW49 1069 aaPredicted RBP7.71□□□□□ -1.17
PTPRR-204ENST00000440835 MYO3BQ8WXR4 1341 aa7.71□□□□□ -1.17
PTPRR-204ENST00000440835 TAF1P21675 1872 aa7.71□□□□□ -1.18
PTPRR-204ENST00000440835 IRS4O14654 1257 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-204ENST00000440835 ECE2O60344 883 aa7.71□□□□□ -1.18
PTPRR-204ENST00000440835 PDE8AO60658 829 aa7.71□□□□□ -1.18
PTPRR-204ENST00000440835 ATP2B4P23634 1241 aa7.71□□□□□ -1.18
PTPRR-204ENST00000440835 AIMP1Q12904 312 aaKnown RBP7.71□□□□□ -1.18
PTPRR-204ENST00000440835 DUSP27Q5VZP5 1158 aa7.71□□□□□ -1.18
PTPRR-204ENST00000440835 RGMBQ6NW40 437 aa7.71□□□□□ -1.18
PTPRR-204ENST00000440835 GLIS2Q9BZE0 524 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-204ENST00000440835 ZC3H12CQ9C0D7 883 aaKnown RBP7.71□□□□□ -1.18
PTPRR-204ENST00000440835 GBA2Q9HCG7 927 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-204ENST00000440835 COL1A1P02452 1464 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-204ENST00000440835 TRAF5O00463 557 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 PSMD14O00487 310 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 RAD17O75943 681 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 BRD2P25440 801 aaKnown RBP7.7□□□□□ -1.18
PTPRR-204ENST00000440835 HIRAP54198 1017 aaPredicted RBP7.7□□□□□ -1.18
PTPRR-204ENST00000440835 PODNQ7Z5L7 613 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 TBC1D16Q8TBP0 767 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 GGA1Q9UJY5 639 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 XDHP47989 1333 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 GPSM2P81274 684 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 PLCB2Q00722 1185 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 MLLT1Q03111 559 aaPredicted RBP7.7□□□□□ -1.18
PTPRR-204ENST00000440835 TMEM132AQ24JP5 1023 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 CCDC30Q5VVM6 783 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 KRT26Q7Z3Y9 468 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 RIC3Q7Z5B4 369 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 TRPM4Q8TD43 1214 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 CDC5LQ99459 802 aaKnown RBP7.7□□□□□ -1.18
PTPRR-204ENST00000440835 NSFL1CQ9UNZ2 370 aaKnown RBP7.7□□□□□ -1.18
PTPRR-204ENST00000440835 LAMB1P07942 1786 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 UNCXA6NJT0 531 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 C6orf229H3BNL8 230 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 HUNKP57058 714 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 SULF1Q8IWU6 871 aa7.7□□□□□ -1.18
PTPRR-204ENST00000440835 CWC25Q9NXE8 425 aaPredicted RBP7.7□□□□□ -1.18
PTPRR-204ENST00000440835 MED23Q9ULK4 1368 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 G3V3G9 751 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 TCERG1O14776 1098 aaKnown RBP7.69□□□□□ -1.18
PTPRR-204ENST00000440835 PKN2Q16513 984 aaKnown RBP7.69□□□□□ -1.18
PTPRR-204ENST00000440835 KIF4BQ2VIQ3 1234 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 DCAF8Q5TAQ9 597 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 RSBN1LQ6PCB5 846 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-204ENST00000440835 USP48Q86UV5 1035 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 METTL22Q9BUU2 404 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-204ENST00000440835 POLLQ9UGP5 575 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 POLR2AP24928 1970 aaKnown RBP7.69□□□□□ -1.18
PTPRR-204ENST00000440835 SLC34A2O95436 690 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 SLC10A3P09131 477 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 CCDC27Q2M243 656 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 CELF1Q92879 486 aaKnown RBP7.69□□□□□ -1.18
PTPRR-204ENST00000440835 FAM89AQ96GI7 184 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 PCDH10Q9P2E7 1040 aa7.69□□□□□ -1.18
PTPRR-204ENST00000440835 IL16Q14005 1332 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 FAM155AB1AL88 458 aaPredicted RBP7.68□□□□□ -1.18
PTPRR-204ENST00000440835 AOC2O75106 756 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 ANXA1P04083 346 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 ANKRD18AQ8IVF6 992 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 MBIPQ9NS73 344 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 ZNF646O15015 1829 aaPredicted RBP7.68□□□□□ -1.18
PTPRR-204ENST00000440835 SCN9AQ15858 1988 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 GMLQ99445 158 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 CFHR5Q9BXR6 569 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 MCOLN1Q9GZU1 580 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 BSDC1Q9NW68 430 aaPredicted RBP7.68□□□□□ -1.18
PTPRR-204ENST00000440835 LEMD3Q9Y2U8 911 aa7.68□□□□□ -1.18
PTPRR-204ENST00000440835 USP17L3A6NCW0 530 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 USP17L4A6NCW7 530 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 UFL1O94874 794 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 NEXNQ0ZGT2 675 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 USP17L1Q7RTZ2 530 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 PLA2G12BQ9BX93 195 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 ANKRD2Q9GZV1 360 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 ANKIB1Q9P2G1 1089 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 ADAMTS8Q9UP79 889 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 LAS1LQ9Y4W2 734 aaKnown RBP7.67□□□□□ -1.18
PTPRR-204ENST00000440835 ECM29Q5VYK3 1845 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms