RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 SLC9A9Q8IVB4 645 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 NEDD1Q8NHV4 660 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 ZDHHC3Q9NYG2 299 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 PHF24Q9UPV7 400 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 MSH6P52701 1360 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 CHD2O14647 1828 aaKnown RBP8.96□□□□□ -0.98
CHD6-204ENST00000440647 RIMS2Q9UQ26 1411 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 NOS2P35228 1153 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 SEC13P55735 322 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 PTK7Q13308 1070 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 TEAD4Q15561 434 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 NBPF1Q3BBV0 1214 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 CRTC2Q53ET0 693 aaPredicted RBP8.95□□□□□ -0.98
CHD6-204ENST00000440647 C14orf37Q86TY3 774 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 CFHR5Q9BXR6 569 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 PLEKHG1Q9ULL1 1385 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 FAM135BQ49AJ0 1406 aa8.95□□□□□ -0.98
CHD6-204ENST00000440647 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 ATP4AP20648 1035 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 MAP2K3P46734 347 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 UBAP2LQ14157 1087 aaKnown RBP8.94□□□□□ -0.98
CHD6-204ENST00000440647 SUZ12Q15022 739 aaKnown RBP8.94□□□□□ -0.98
CHD6-204ENST00000440647 TSEN2Q8NCE0 465 aaKnown RBP8.94□□□□□ -0.98
CHD6-204ENST00000440647 ZDHHC1Q8WTX9 485 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 L3MBTL2Q969R5 705 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 PARP3Q9Y6F1 533 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 ROCK1Q13464 1354 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 ZFYVE9O95405 1425 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 DIP2AQ14689 1571 aa8.94□□□□□ -0.98
CHD6-204ENST00000440647 TATP17735 454 aaPredicted RBP8.93□□□□□ -0.98
CHD6-204ENST00000440647 ITGAEP38570 1179 aa8.93□□□□□ -0.98
CHD6-204ENST00000440647 TBCELQ5QJ74 424 aa8.93□□□□□ -0.98
CHD6-204ENST00000440647 GPAT2Q6NUI2 795 aa8.93□□□□□ -0.98
CHD6-204ENST00000440647 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.93□□□□□ -0.98
CHD6-204ENST00000440647 SPHKAPQ2M3C7 1700 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L15C9J2P7 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L10C9JJH3 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L13C9JLJ4 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L12C9JPN9 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L11C9JVI0 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L21D6R901 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L18D6R9N7 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L22D6RA61 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L17D6RBQ6 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L19D6RCP7 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L20D6RJB6 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 RFX1P22670 979 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 USP17L24Q0WX57 530 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 DPYDQ12882 1025 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 ARSJQ5FYB0 599 aaPredicted RBP8.92□□□□□ -0.98
CHD6-204ENST00000440647 NLRP8Q86W28 1048 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 ANKMY2Q8IV38 441 aa8.92□□□□□ -0.98
CHD6-204ENST00000440647 TSPAN10Q9H1Z9 355 aaPredicted RBP8.92□□□□□ -0.98
CHD6-204ENST00000440647 TRPM2O94759 1503 aa8.91□□□□□ -0.98
CHD6-204ENST00000440647 NUP155O75694 1391 aa8.91□□□□□ -0.98
CHD6-204ENST00000440647 A0A1W2PNR3 127 aa8.91□□□□□ -0.98
CHD6-204ENST00000440647 SERTM1A2A2V5 107 aa8.91□□□□□ -0.98
CHD6-204ENST00000440647 TXLNAP40222 546 aa8.91□□□□□ -0.98
CHD6-204ENST00000440647 PSMA6P60900 246 aaKnown RBP8.91□□□□□ -0.98
CHD6-204ENST00000440647 FIGNL1Q6PIW4 674 aa8.91□□□□□ -0.98
CHD6-204ENST00000440647 ZIC5Q96T25 663 aa8.91□□□□□ -0.98
CHD6-204ENST00000440647 ZNF232Q9UNY5 417 aa8.91□□□□□ -0.98
CHD6-204ENST00000440647 ATAD2Q6PL18 1390 aa8.9□□□□□ -0.98
CHD6-204ENST00000440647 GAS2L2Q8NHY3 880 aa8.9□□□□□ -0.98
CHD6-204ENST00000440647 ACDQ96AP0 544 aa8.9□□□□□ -0.98
CHD6-204ENST00000440647 ZCCHC2Q9C0B9 1178 aaKnown RBP8.9□□□□□ -0.98
CHD6-204ENST00000440647 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.89□□□□□ -0.99
CHD6-204ENST00000440647 EML1O00423 815 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 BNIP3LO60238 219 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 CDCA8Q53HL2 280 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 HINFPQ9BQA5 517 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 NDFIP2Q9NV92 336 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 SLAIN2Q9P270 581 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 ATXN7L1Q9ULK2 861 aaPredicted RBP8.89□□□□□ -0.99
CHD6-204ENST00000440647 CHMP3Q9Y3E7 222 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 TBX22Q9Y458 520 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 PCDHGC4Q9Y5F7 938 aa8.89□□□□□ -0.99
CHD6-204ENST00000440647 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 PIK3R4Q99570 1358 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 CNTNAP5Q8WYK1 1306 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 OIP5O43482 229 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 C21orf2O43822 256 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 PPP1R12BO60237 982 aaPredicted RBP8.88□□□□□ -0.99
CHD6-204ENST00000440647 POTEAQ6S8J7 498 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 BICDL1Q6ZP65 573 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 OXCT2Q9BYC2 517 aaPredicted RBP8.88□□□□□ -0.99
CHD6-204ENST00000440647 ADAMTS13Q76LX8 1427 aa8.88□□□□□ -0.99
CHD6-204ENST00000440647 COL16A1Q07092 1604 aaPredicted RBP8.87□□□□□ -0.99
CHD6-204ENST00000440647 JCADQ9P266 1359 aa8.87□□□□□ -0.99
CHD6-204ENST00000440647 KIF1BO60333 1816 aa8.87□□□□□ -0.99
CHD6-204ENST00000440647 ATF3P18847 181 aa8.87□□□□□ -0.99
CHD6-204ENST00000440647 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
CHD6-204ENST00000440647 ZNF326Q5BKZ1 582 aaKnown RBP8.87□□□□□ -0.99
CHD6-204ENST00000440647 SH3PXD2AQ5TCZ1 1133 aa8.87□□□□□ -0.99
CHD6-204ENST00000440647 NPM2Q86SE8 214 aaKnown RBP8.87□□□□□ -0.99
CHD6-204ENST00000440647 STAG2Q8N3U4 1231 aa8.87□□□□□ -0.99
CHD6-204ENST00000440647 SCG3Q8WXD2 468 aaKnown RBP8.87□□□□□ -0.99
CHD6-204ENST00000440647 ABHD17AQ96GS6 310 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms