RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 ZNF594Q96JF6 807 aaPredicted RBP28.24■■■□□ 2.11
CNOT3-203ENST00000440571 EYA3Q99504 573 aa28.24■■■□□ 2.11
CNOT3-203ENST00000440571 XDHP47989 1333 aa28.23■■■□□ 2.11
CNOT3-203ENST00000440571 GLTPD2A6NH11 291 aa28.23■■■□□ 2.11
CNOT3-203ENST00000440571 ATP2B4P23634 1241 aa28.23■■■□□ 2.11
CNOT3-203ENST00000440571 LDHAL6AQ6ZMR3 332 aa28.23■■■□□ 2.11
CNOT3-203ENST00000440571 NIM1KQ8IY84 436 aa28.23■■■□□ 2.11
CNOT3-203ENST00000440571 ANKRD2Q9GZV1 360 aa28.23■■■□□ 2.11
CNOT3-203ENST00000440571 KDM2BQ8NHM5 1336 aa28.22■■■□□ 2.11
CNOT3-203ENST00000440571 UFL1O94874 794 aa28.22■■■□□ 2.11
CNOT3-203ENST00000440571 RLBP1P12271 317 aa28.22■■■□□ 2.11
CNOT3-203ENST00000440571 TAF1P21675 1872 aa28.22■■■□□ 2.11
CNOT3-203ENST00000440571 KIAA2012Q0VF49 1180 aa28.22■■■□□ 2.11
CNOT3-203ENST00000440571 LRRFIP2Q9Y608 721 aaKnown RBP28.22■■■□□ 2.11
CNOT3-203ENST00000440571 COL4A1P02462 1669 aa28.22■■■□□ 2.11
CNOT3-203ENST00000440571 FZD9O00144 591 aa28.21■■■□□ 2.11
CNOT3-203ENST00000440571 RIMBP2O15034 1052 aa28.21■■■□□ 2.11
CNOT3-203ENST00000440571 PLIN1O60240 522 aa28.21■■■□□ 2.11
CNOT3-203ENST00000440571 ITPRIPQ8IWB1 547 aa28.21■■■□□ 2.11
CNOT3-203ENST00000440571 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.21■■■□□ 2.11
CNOT3-203ENST00000440571 ZC3H12CQ9C0D7 883 aaKnown RBP28.21■■■□□ 2.11
CNOT3-203ENST00000440571 CNNM1Q9NRU3 951 aa28.21■■■□□ 2.11
CNOT3-203ENST00000440571 PANK1Q8TE04 598 aa28.2■■■□□ 2.1
CNOT3-203ENST00000440571 EIF6P56537 245 aaKnown RBP28.19■■■□□ 2.1
CNOT3-203ENST00000440571 CHRNDQ07001 517 aa28.19■■■□□ 2.1
CNOT3-203ENST00000440571 GNAI2P04899 355 aa28.18■■■□□ 2.1
CNOT3-203ENST00000440571 GPR101Q96P66 508 aaPredicted RBP28.18■■■□□ 2.1
CNOT3-203ENST00000440571 LEMD3Q9Y2U8 911 aa28.18■■■□□ 2.1
CNOT3-203ENST00000440571 SBF1O95248 1867 aa28.18■■■□□ 2.1
CNOT3-203ENST00000440571 ZNRF3Q9ULT6 936 aa28.17■■■□□ 2.1
CNOT3-203ENST00000440571 G3V3G9 751 aa28.16■■■□□ 2.1
CNOT3-203ENST00000440571 DDNO94850 711 aaPredicted RBP28.16■■■□□ 2.1
CNOT3-203ENST00000440571 DCAF8Q5TAQ9 597 aa28.16■■■□□ 2.1
CNOT3-203ENST00000440571 ZBTB7BO15156 539 aaPredicted RBP28.15■■■□□ 2.1
CNOT3-203ENST00000440571 KCNJ4P48050 445 aa28.15■■■□□ 2.1
CNOT3-203ENST00000440571 HELBQ8NG08 1087 aaPredicted RBP28.15■■■□□ 2.1
CNOT3-203ENST00000440571 PUS3Q9BZE2 481 aaKnown RBP28.15■■■□□ 2.1
CNOT3-203ENST00000440571 RRAGCQ9HB90 399 aa28.15■■■□□ 2.1
CNOT3-203ENST00000440571 MYH3P11055 1940 aa28.14■■■□□ 2.1
CNOT3-203ENST00000440571 WTIPA6NIX2 430 aaPredicted RBP28.14■■■□□ 2.1
CNOT3-203ENST00000440571 DOK7Q18PE1 504 aa28.14■■■□□ 2.1
CNOT3-203ENST00000440571 KLHDC4Q8TBB5 520 aa28.14■■■□□ 2.1
CNOT3-203ENST00000440571 NMRK2Q9NPI5 230 aa28.14■■■□□ 2.1
CNOT3-203ENST00000440571 ZNF541Q9H0D2 1346 aa28.14■■■□□ 2.09
CNOT3-203ENST00000440571 TAF5LO75529 589 aa28.13■■■□□ 2.09
CNOT3-203ENST00000440571 RIPOR2Q9Y4F9 1068 aa28.13■■■□□ 2.09
CNOT3-203ENST00000440571 ZNF804BA4D1E1 1349 aa28.13■■■□□ 2.09
CNOT3-203ENST00000440571 RFX5P48382 616 aaPredicted RBP28.12■■■□□ 2.09
CNOT3-203ENST00000440571 DBNDD1Q9H9R9 158 aa28.12■■■□□ 2.09
CNOT3-203ENST00000440571 GJA3Q9Y6H8 435 aa28.12■■■□□ 2.09
CNOT3-203ENST00000440571 PTPN12Q05209 780 aaKnown RBP28.11■■■□□ 2.09
CNOT3-203ENST00000440571 PDE3AQ14432 1141 aa28.11■■■□□ 2.09
CNOT3-203ENST00000440571 LRRC24Q50LG9 513 aa28.11■■■□□ 2.09
CNOT3-203ENST00000440571 GPC2Q8N158 579 aa28.11■■■□□ 2.09
CNOT3-203ENST00000440571 VEGFAP15692 232 aaPredicted RBP28.1■■■□□ 2.09
CNOT3-203ENST00000440571 CXCL9Q07325 125 aa28.1■■■□□ 2.09
CNOT3-203ENST00000440571 COG6Q9Y2V7 657 aa28.1■■■□□ 2.09
CNOT3-203ENST00000440571 MROH5Q6ZUA9 1318 aa28.1■■■□□ 2.09
CNOT3-203ENST00000440571 LRRC37AA6NMS7 1700 aa28.09■■■□□ 2.09
CNOT3-203ENST00000440571 SRGAP3O43295 1099 aa28.09■■■□□ 2.09
CNOT3-203ENST00000440571 ECE2O60344 883 aa28.09■■■□□ 2.09
CNOT3-203ENST00000440571 MVPQ14764 893 aaKnown RBP28.09■■■□□ 2.09
CNOT3-203ENST00000440571 TNIP1Q15025 636 aa28.09■■■□□ 2.09
CNOT3-203ENST00000440571 METTL24Q5JXM2 366 aa28.09■■■□□ 2.09
CNOT3-203ENST00000440571 CCDC88AQ3V6T2 1871 aa28.08■■■□□ 2.09
CNOT3-203ENST00000440571 DUOX1Q9NRD9 1551 aa28.08■■■□□ 2.09
CNOT3-203ENST00000440571 YDJCA8MPS7 323 aa28.08■■■□□ 2.09
CNOT3-203ENST00000440571 EYA2O00167 538 aa28.08■■■□□ 2.09
CNOT3-203ENST00000440571 RAD17O75943 681 aa28.08■■■□□ 2.09
CNOT3-203ENST00000440571 MTX1Q13505 466 aa28.08■■■□□ 2.09
CNOT3-203ENST00000440571 CIAPIN1Q6FI81 312 aa28.08■■■□□ 2.09
CNOT3-203ENST00000440571 COL4A5P29400 1685 aa28.07■■■□□ 2.08
CNOT3-203ENST00000440571 SNAP23O00161 211 aa28.07■■■□□ 2.08
CNOT3-203ENST00000440571 KIF3CO14782 793 aa28.07■■■□□ 2.08
CNOT3-203ENST00000440571 DDX19BQ9UMR2 479 aa28.07■■■□□ 2.08
CNOT3-203ENST00000440571 C16orf71Q8IYS4 520 aaPredicted RBP28.06■■■□□ 2.08
CNOT3-203ENST00000440571 L3MBTL3Q96JM7 780 aaPredicted RBP28.06■■■□□ 2.08
CNOT3-203ENST00000440571 SIL1Q9H173 461 aa28.06■■■□□ 2.08
CNOT3-203ENST00000440571 CHMP4BQ9H444 224 aaKnown RBP28.06■■■□□ 2.08
CNOT3-203ENST00000440571 C1orf115Q9H7X2 142 aa28.06■■■□□ 2.08
CNOT3-203ENST00000440571 FBXO3Q9UK99 471 aa28.06■■■□□ 2.08
CNOT3-203ENST00000440571 MED23Q9ULK4 1368 aa28.06■■■□□ 2.08
CNOT3-203ENST00000440571 POTECB2RU33 542 aa28.05■■■□□ 2.08
CNOT3-203ENST00000440571 ATP8B2P98198 1209 aa28.05■■■□□ 2.08
CNOT3-203ENST00000440571 UBE4AQ14139 1066 aa28.05■■■□□ 2.08
CNOT3-203ENST00000440571 C20orf194Q5TEA3 1177 aa28.05■■■□□ 2.08
CNOT3-203ENST00000440571 PODNQ7Z5L7 613 aa28.05■■■□□ 2.08
CNOT3-203ENST00000440571 TXNRD3Q86VQ6 643 aa28.05■■■□□ 2.08
CNOT3-203ENST00000440571 COPRSQ9NQ92 184 aa28.05■■■□□ 2.08
CNOT3-203ENST00000440571 PA2G4Q9UQ80 394 aaKnown RBP28.05■■■□□ 2.08
CNOT3-203ENST00000440571 COA1Q9GZY4 146 aa28.04■■■□□ 2.08
CNOT3-203ENST00000440571 KCNQ5Q9NR82 932 aa28.04■■■□□ 2.08
CNOT3-203ENST00000440571 DICER1Q9UPY3 1922 aaKnown RBP28.04■■■□□ 2.08
CNOT3-203ENST00000440571 IQCA1LA6NCM1 817 aa28.03■■■□□ 2.08
CNOT3-203ENST00000440571 CIAO1O76071 339 aa28.03■■■□□ 2.08
CNOT3-203ENST00000440571 PDE8BO95263 885 aa28.03■■■□□ 2.08
CNOT3-203ENST00000440571 KLRK1P26718 216 aa28.03■■■□□ 2.08
CNOT3-203ENST00000440571 C15orf52Q6ZUT6 534 aaKnown RBP28.03■■■□□ 2.08
CNOT3-203ENST00000440571 PNMA6EA0A0J9YXQ4 647 aa28.02■■■□□ 2.08
CNOT3-203ENST00000440571 ATG9AQ7Z3C6 839 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms