RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 LAMA4Q16363 1823 aa15.88■□□□□ 0.13
ACTN4-204ENST00000440400 IRS4O14654 1257 aaPredicted RBP15.87■□□□□ 0.13
ACTN4-204ENST00000440400 PUS3Q9BZE2 481 aaKnown RBP15.87■□□□□ 0.13
ACTN4-204ENST00000440400 ZNF594Q96JF6 807 aaPredicted RBP15.87■□□□□ 0.13
ACTN4-204ENST00000440400 CWC22Q9HCG8 908 aaKnown RBP15.87■□□□□ 0.13
ACTN4-204ENST00000440400 IFIT5Q13325 482 aaKnown RBP15.87■□□□□ 0.13
ACTN4-204ENST00000440400 SUSD4Q5VX71 490 aa15.87■□□□□ 0.13
ACTN4-204ENST00000440400 CWC27Q6UX04 472 aaKnown RBP15.87■□□□□ 0.13
ACTN4-204ENST00000440400 KBTBD3Q8NAB2 608 aa15.87■□□□□ 0.13
ACTN4-204ENST00000440400 BOLA2Q9H3K6 86 aa15.87■□□□□ 0.13
ACTN4-204ENST00000440400 RGPD3A6NKT7 1758 aaPredicted RBP15.87■□□□□ 0.13
ACTN4-204ENST00000440400 RGPD4Q7Z3J3 1758 aa15.87■□□□□ 0.13
ACTN4-204ENST00000440400 PTH1RQ03431 593 aa15.86■□□□□ 0.13
ACTN4-204ENST00000440400 CCDC9Q9Y3X0 531 aaKnown RBP15.86■□□□□ 0.13
ACTN4-204ENST00000440400 A0A0D9SFI3 127 aa15.86■□□□□ 0.13
ACTN4-204ENST00000440400 INTS4Q96HW7 963 aaKnown RBP15.86■□□□□ 0.13
ACTN4-204ENST00000440400 GREM2Q9H772 168 aa15.86■□□□□ 0.13
ACTN4-204ENST00000440400 A0A1B0GUL7 405 aa15.85■□□□□ 0.13
ACTN4-204ENST00000440400 HSPA1LP34931 641 aa15.85■□□□□ 0.13
ACTN4-204ENST00000440400 SYNE4Q8N205 404 aa15.85■□□□□ 0.13
ACTN4-204ENST00000440400 TBC1D2BQ9UPU7 963 aa15.85■□□□□ 0.13
ACTN4-204ENST00000440400 ZBTB22O15209 634 aa15.85■□□□□ 0.13
ACTN4-204ENST00000440400 ITGA6P23229 1130 aa15.85■□□□□ 0.13
ACTN4-204ENST00000440400 FAM227BQ96M60 508 aa15.85■□□□□ 0.13
ACTN4-204ENST00000440400 FGFR2P21802 821 aa15.85■□□□□ 0.13
ACTN4-204ENST00000440400 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
ACTN4-204ENST00000440400 TRMT112Q9UI30 125 aaKnown RBP15.85■□□□□ 0.13
ACTN4-204ENST00000440400 AFF2P51816 1311 aa15.84■□□□□ 0.13
ACTN4-204ENST00000440400 ANKRD18BA2A2Z9 1011 aa15.84■□□□□ 0.13
ACTN4-204ENST00000440400 ZHX1Q9UKY1 873 aaPredicted RBP15.84■□□□□ 0.13
ACTN4-204ENST00000440400 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
ACTN4-204ENST00000440400 GPTP24298 496 aa15.84■□□□□ 0.13
ACTN4-204ENST00000440400 RASEFQ8IZ41 740 aa15.84■□□□□ 0.13
ACTN4-204ENST00000440400 ZSWIM6Q9HCJ5 1215 aa15.84■□□□□ 0.13
ACTN4-204ENST00000440400 HELLSQ9NRZ9 838 aa15.84■□□□□ 0.13
ACTN4-204ENST00000440400 CEP126Q9P2H0 1117 aa15.84■□□□□ 0.13
ACTN4-204ENST00000440400 MROH5Q6ZUA9 1318 aa15.84■□□□□ 0.13
ACTN4-204ENST00000440400 KIAA1211Q6ZU35 1233 aa15.83■□□□□ 0.13
ACTN4-204ENST00000440400 FSD1Q9BTV5 496 aa15.83■□□□□ 0.13
ACTN4-204ENST00000440400 CHMP3Q9Y3E7 222 aa15.83■□□□□ 0.13
ACTN4-204ENST00000440400 KIAA1551Q9HCM1 1747 aa15.83■□□□□ 0.13
ACTN4-204ENST00000440400 FSD2A1L4K1 749 aa15.83■□□□□ 0.12
ACTN4-204ENST00000440400 TAF5LO75529 589 aa15.83■□□□□ 0.12
ACTN4-204ENST00000440400 SLC10A5Q5PT55 438 aa15.83■□□□□ 0.12
ACTN4-204ENST00000440400 ZNF652Q9Y2D9 606 aa15.83■□□□□ 0.12
ACTN4-204ENST00000440400 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.12
ACTN4-204ENST00000440400 PAG1Q9NWQ8 432 aa15.83■□□□□ 0.12
ACTN4-204ENST00000440400 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
ACTN4-204ENST00000440400 FAM13BQ9NYF5 915 aa15.82■□□□□ 0.12
ACTN4-204ENST00000440400 HMG20BQ9P0W2 317 aa15.82■□□□□ 0.12
ACTN4-204ENST00000440400 TRPC5Q9UL62 973 aaPredicted RBP15.82■□□□□ 0.12
ACTN4-204ENST00000440400 NEK4P51957 841 aa15.82■□□□□ 0.12
ACTN4-204ENST00000440400 ZMYM1Q5SVZ6 1142 aa15.82■□□□□ 0.12
ACTN4-204ENST00000440400 TRIM44Q96DX7 344 aaPredicted RBP15.82■□□□□ 0.12
ACTN4-204ENST00000440400 TMX3Q96JJ7 454 aa15.82■□□□□ 0.12
ACTN4-204ENST00000440400 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
ACTN4-204ENST00000440400 ARID4AP29374 1257 aaPredicted RBP15.81■□□□□ 0.12
ACTN4-204ENST00000440400 TIMM10P62072 90 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 PTF1AQ7RTS3 328 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 XAGE2Q96GT9 111 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 PRDM10Q9NQV6 1147 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
ACTN4-204ENST00000440400 SSFA2P28290 1259 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 TAF7LQ5H9L4 462 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 ZNF589Q86UQ0 364 aaPredicted RBP15.81■□□□□ 0.12
ACTN4-204ENST00000440400 RBM8AQ9Y5S9 174 aaKnown RBP15.81■□□□□ 0.12
ACTN4-204ENST00000440400 MCM4P33991 863 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 VPS53Q5VIR6 699 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 CREB3L3Q68CJ9 461 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 NARFQ9UHQ1 456 aa15.81■□□□□ 0.12
ACTN4-204ENST00000440400 SLC27A2O14975 620 aa15.8■□□□□ 0.12
ACTN4-204ENST00000440400 TPM2P07951 284 aa15.8■□□□□ 0.12
ACTN4-204ENST00000440400 SF3B3Q15393 1217 aaKnown RBP15.8■□□□□ 0.12
ACTN4-204ENST00000440400 PDE8BO95263 885 aa15.8■□□□□ 0.12
ACTN4-204ENST00000440400 MCMDC2Q4G0Z9 681 aa15.8■□□□□ 0.12
ACTN4-204ENST00000440400 EDC3Q96F86 508 aaKnown RBP15.8■□□□□ 0.12
ACTN4-204ENST00000440400 MYO5AQ9Y4I1 1855 aaKnown RBP15.8■□□□□ 0.12
ACTN4-204ENST00000440400 TNPO1Q92973 898 aaKnown RBP15.79■□□□□ 0.12
ACTN4-204ENST00000440400 TIAM2Q8IVF5 1701 aa15.79■□□□□ 0.12
ACTN4-204ENST00000440400 NRXN2Q9P2S2 1712 aa15.79■□□□□ 0.12
ACTN4-204ENST00000440400 MAST2Q6P0Q8 1798 aa15.79■□□□□ 0.12
ACTN4-204ENST00000440400 DSCC1Q9BVC3 393 aa15.79■□□□□ 0.12
ACTN4-204ENST00000440400 ADORA1P30542 326 aa15.79■□□□□ 0.12
ACTN4-204ENST00000440400 KAT6BQ8WYB5 2073 aa15.78■□□□□ 0.12
ACTN4-204ENST00000440400 NUCB2P80303 420 aa15.78■□□□□ 0.12
ACTN4-204ENST00000440400 ATP2B3Q16720 1220 aa15.78■□□□□ 0.12
ACTN4-204ENST00000440400 LRRC37AA6NMS7 1700 aa15.78■□□□□ 0.12
ACTN4-204ENST00000440400 IFIT1P09914 478 aaKnown RBP15.78■□□□□ 0.12
ACTN4-204ENST00000440400 LDHAL6AQ6ZMR3 332 aa15.78■□□□□ 0.12
ACTN4-204ENST00000440400 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
ACTN4-204ENST00000440400 CCDC158Q5M9N0 1113 aa15.77■□□□□ 0.12
ACTN4-204ENST00000440400 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
ACTN4-204ENST00000440400 RNF113AO15541 343 aaKnown RBP15.77■□□□□ 0.12
ACTN4-204ENST00000440400 ZFYP08048 801 aaPredicted RBP15.77■□□□□ 0.12
ACTN4-204ENST00000440400 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.12
ACTN4-204ENST00000440400 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.12
ACTN4-204ENST00000440400 PTMSP20962 102 aa15.77■□□□□ 0.11
ACTN4-204ENST00000440400 MRE11P49959 708 aa15.77■□□□□ 0.11
ACTN4-204ENST00000440400 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.11
ACTN4-204ENST00000440400 NEUROD6Q96NK8 337 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms