RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
FAM3A-213ENST00000440318 TBC1D8O95759 1140 aa17.4■□□□□ 0.38
FAM3A-213ENST00000440318 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
FAM3A-213ENST00000440318 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
FAM3A-213ENST00000440318 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
FAM3A-213ENST00000440318 AIMP1Q12904 312 aaKnown RBP17.39■□□□□ 0.37
FAM3A-213ENST00000440318 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
FAM3A-213ENST00000440318 NFE2L2Q16236 605 aa17.39■□□□□ 0.37
FAM3A-213ENST00000440318 PKN2Q16513 984 aaKnown RBP17.39■□□□□ 0.37
FAM3A-213ENST00000440318 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
FAM3A-213ENST00000440318 MOB2Q70IA6 237 aa17.39■□□□□ 0.37
FAM3A-213ENST00000440318 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
FAM3A-213ENST00000440318 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
FAM3A-213ENST00000440318 HDAC9Q9UKV0 1011 aa17.39■□□□□ 0.37
FAM3A-213ENST00000440318 MKI67P46013 3256 aaKnown RBP17.38■□□□□ 0.37
FAM3A-213ENST00000440318 VIL1P09327 827 aaKnown RBP17.38■□□□□ 0.37
FAM3A-213ENST00000440318 ANGEL2Q5VTE6 544 aaKnown RBP17.38■□□□□ 0.37
FAM3A-213ENST00000440318 MIER1Q8N108 512 aa17.38■□□□□ 0.37
FAM3A-213ENST00000440318 MRS2Q9HD23 443 aa17.38■□□□□ 0.37
FAM3A-213ENST00000440318 TSPYL4Q9UJ04 414 aa17.38■□□□□ 0.37
FAM3A-213ENST00000440318 TBC1D16Q8TBP0 767 aa17.37■□□□□ 0.37
FAM3A-213ENST00000440318 NECTIN2Q92692 538 aa17.37■□□□□ 0.37
FAM3A-213ENST00000440318 SCAF8Q9UPN6 1271 aaKnown RBP17.37■□□□□ 0.37
FAM3A-213ENST00000440318 SCARF1Q14162 830 aa17.36■□□□□ 0.37
FAM3A-213ENST00000440318 HTTP42858 3142 aa17.36■□□□□ 0.37
FAM3A-213ENST00000440318 NEFMP07197 916 aa17.35■□□□□ 0.37
FAM3A-213ENST00000440318 ZNF280AP59817 542 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-213ENST00000440318 FKBP1BP68106 108 aa17.35■□□□□ 0.37
FAM3A-213ENST00000440318 SF3B3Q15393 1217 aaKnown RBP17.35■□□□□ 0.37
FAM3A-213ENST00000440318 EYA3Q99504 573 aa17.35■□□□□ 0.37
FAM3A-213ENST00000440318 UBE2Q2LH0YL09 131 aa17.34■□□□□ 0.37
FAM3A-213ENST00000440318 ZNF609O15014 1411 aa17.34■□□□□ 0.37
FAM3A-213ENST00000440318 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
FAM3A-213ENST00000440318 HABP4Q5JVS0 413 aaKnown RBP17.34■□□□□ 0.37
FAM3A-213ENST00000440318 FBXO46Q6PJ61 603 aaPredicted RBP17.34■□□□□ 0.37
FAM3A-213ENST00000440318 GCC1Q96CN9 775 aa17.34■□□□□ 0.37
FAM3A-213ENST00000440318 FAM89AQ96GI7 184 aa17.34■□□□□ 0.37
FAM3A-213ENST00000440318 GPR25O00155 361 aa17.33■□□□□ 0.36
FAM3A-213ENST00000440318 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
FAM3A-213ENST00000440318 PRAMEF18Q5VWM3 479 aa17.32■□□□□ 0.36
FAM3A-213ENST00000440318 RSBN1LQ6PCB5 846 aaPredicted RBP17.32■□□□□ 0.36
FAM3A-213ENST00000440318 ZC3H12CQ9C0D7 883 aaKnown RBP17.32■□□□□ 0.36
FAM3A-213ENST00000440318 R3HDMLQ9H3Y0 253 aa17.32■□□□□ 0.36
FAM3A-213ENST00000440318 PSME4Q14997 1843 aa17.31■□□□□ 0.36
FAM3A-213ENST00000440318 TM4SF4P48230 202 aa17.31■□□□□ 0.36
FAM3A-213ENST00000440318 MKRN3Q13064 507 aaKnown RBP17.31■□□□□ 0.36
FAM3A-213ENST00000440318 KRT24Q2M2I5 525 aa17.31■□□□□ 0.36
FAM3A-213ENST00000440318 NOM1Q5C9Z4 860 aaKnown RBP17.31■□□□□ 0.36
FAM3A-213ENST00000440318 AGBL3Q8NEM8 1001 aa17.31■□□□□ 0.36
FAM3A-213ENST00000440318 GMLQ99445 158 aa17.31■□□□□ 0.36
FAM3A-213ENST00000440318 MYOZ2Q9NPC6 264 aa17.31■□□□□ 0.36
FAM3A-213ENST00000440318 PITPNM2Q9BZ72 1349 aa17.3■□□□□ 0.36
FAM3A-213ENST00000440318 ATP5J2-PTCD1G3V325 749 aa17.3■□□□□ 0.36
FAM3A-213ENST00000440318 UFL1O94874 794 aa17.3■□□□□ 0.36
FAM3A-213ENST00000440318 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
FAM3A-213ENST00000440318 ISCA1Q9BUE6 129 aa17.3■□□□□ 0.36
FAM3A-213ENST00000440318 PODXL2Q9NZ53 605 aa17.3■□□□□ 0.36
FAM3A-213ENST00000440318 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
FAM3A-213ENST00000440318 USP17L8P0C7I0 530 aa17.29■□□□□ 0.36
FAM3A-213ENST00000440318 CHPF2Q9P2E5 772 aa17.29■□□□□ 0.36
FAM3A-213ENST00000440318 CENPFP49454 3210 aa17.28■□□□□ 0.36
FAM3A-213ENST00000440318 POTEFA5A3E0 1075 aa17.28■□□□□ 0.36
FAM3A-213ENST00000440318 G3V3G9 751 aa17.28■□□□□ 0.36
FAM3A-213ENST00000440318 FKTNO75072 461 aa17.28■□□□□ 0.36
FAM3A-213ENST00000440318 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
FAM3A-213ENST00000440318 PLBD2Q8NHP8 589 aa17.28■□□□□ 0.36
FAM3A-213ENST00000440318 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
FAM3A-213ENST00000440318 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
FAM3A-213ENST00000440318 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-213ENST00000440318 TTLL12Q14166 644 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-213ENST00000440318 NBPF9Q3BBW0 867 aa17.27■□□□□ 0.36
FAM3A-213ENST00000440318 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
FAM3A-213ENST00000440318 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.36
FAM3A-213ENST00000440318 CFHR5Q9BXR6 569 aa17.27■□□□□ 0.36
FAM3A-213ENST00000440318 ANKIB1Q9P2G1 1089 aa17.27■□□□□ 0.36
FAM3A-213ENST00000440318 GGA1Q9UJY5 639 aa17.27■□□□□ 0.36
FAM3A-213ENST00000440318 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
FAM3A-213ENST00000440318 ADAMTS8Q9UP79 889 aa17.26■□□□□ 0.35
FAM3A-213ENST00000440318 BRCA2P51587 3418 aa17.25■□□□□ 0.35
FAM3A-213ENST00000440318 FXR1P51114 621 aaKnown RBP eCLIP17.25■□□□□ 0.35
FAM3A-213ENST00000440318 RIPK4P57078 832 aa17.25■□□□□ 0.35
FAM3A-213ENST00000440318 SREBF2Q12772 1141 aa17.25■□□□□ 0.35
FAM3A-213ENST00000440318 ANKRD13DQ6ZTN6 518 aa17.25■□□□□ 0.35
FAM3A-213ENST00000440318 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
FAM3A-213ENST00000440318 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
FAM3A-213ENST00000440318 MXD3Q9BW11 206 aa17.24■□□□□ 0.35
FAM3A-213ENST00000440318 RBBP6Q7Z6E9 1792 aaKnown RBP17.23■□□□□ 0.35
FAM3A-213ENST00000440318 USP17L3A6NCW0 530 aa17.23■□□□□ 0.35
FAM3A-213ENST00000440318 USP17L4A6NCW7 530 aa17.23■□□□□ 0.35
FAM3A-213ENST00000440318 WTIPA6NIX2 430 aaPredicted RBP17.23■□□□□ 0.35
FAM3A-213ENST00000440318 USP17L1Q7RTZ2 530 aa17.23■□□□□ 0.35
FAM3A-213ENST00000440318 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
FAM3A-213ENST00000440318 PRKG1Q13976 671 aa17.22■□□□□ 0.35
FAM3A-213ENST00000440318 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
FAM3A-213ENST00000440318 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
FAM3A-213ENST00000440318 WNT10BO00744 389 aa17.21■□□□□ 0.35
FAM3A-213ENST00000440318 SASH1O94885 1247 aa17.21■□□□□ 0.35
FAM3A-213ENST00000440318 TRIM28Q13263 835 aaKnown RBP17.21■□□□□ 0.35
FAM3A-213ENST00000440318 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
FAM3A-213ENST00000440318 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms