RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 TBC1D16Q8TBP0 767 aa26.89■■□□□ 1.9
TRIM39-210ENST00000440271 POLR2AP24928 1970 aaKnown RBP26.88■■□□□ 1.89
TRIM39-210ENST00000440271 RPS8P62241 208 aaKnown RBP26.88■■□□□ 1.89
TRIM39-210ENST00000440271 RNF186Q9NXI6 227 aa26.88■■□□□ 1.89
TRIM39-210ENST00000440271 DBF4Q9UBU7 674 aaPredicted RBP26.88■■□□□ 1.89
TRIM39-210ENST00000440271 KIF4BQ2VIQ3 1234 aa26.87■■□□□ 1.89
TRIM39-210ENST00000440271 COL4A1P02462 1669 aa26.86■■□□□ 1.89
TRIM39-210ENST00000440271 IRS4O14654 1257 aaPredicted RBP26.86■■□□□ 1.89
TRIM39-210ENST00000440271 TRPA1O75762 1119 aa26.86■■□□□ 1.89
TRIM39-210ENST00000440271 VIL1P09327 827 aaKnown RBP26.86■■□□□ 1.89
TRIM39-210ENST00000440271 SULF1Q8IWU6 871 aa26.86■■□□□ 1.89
TRIM39-210ENST00000440271 ZC3H12CQ9C0D7 883 aaKnown RBP26.86■■□□□ 1.89
TRIM39-210ENST00000440271 HOXB7P09629 217 aa26.85■■□□□ 1.89
TRIM39-210ENST00000440271 TRIM28Q13263 835 aaKnown RBP26.85■■□□□ 1.89
TRIM39-210ENST00000440271 CCDC146Q8IYE0 955 aa26.85■■□□□ 1.89
TRIM39-210ENST00000440271 GGA3Q9NZ52 723 aa26.85■■□□□ 1.89
TRIM39-210ENST00000440271 TRIM35Q9UPQ4 493 aa26.85■■□□□ 1.89
TRIM39-210ENST00000440271 RALBP1Q15311 655 aa26.84■■□□□ 1.89
TRIM39-210ENST00000440271 CSRNP1Q96S65 589 aa26.84■■□□□ 1.89
TRIM39-210ENST00000440271 HYPKQ9NX55 129 aa26.84■■□□□ 1.89
TRIM39-210ENST00000440271 PODXL2Q9NZ53 605 aa26.84■■□□□ 1.89
TRIM39-210ENST00000440271 ASTN2O75129 1339 aaPredicted RBP26.84■■□□□ 1.89
TRIM39-210ENST00000440271 SLC10A3P09131 477 aa26.83■■□□□ 1.89
TRIM39-210ENST00000440271 G3V3G9 751 aa26.82■■□□□ 1.88
TRIM39-210ENST00000440271 DCAF8Q5TAQ9 597 aa26.82■■□□□ 1.88
TRIM39-210ENST00000440271 CDCA5Q96FF9 252 aa26.82■■□□□ 1.88
TRIM39-210ENST00000440271 SEC31BQ9NQW1 1179 aa26.81■■□□□ 1.88
TRIM39-210ENST00000440271 TNRC18O15417 2968 aaPredicted RBP26.8■■□□□ 1.88
TRIM39-210ENST00000440271 UFL1O94874 794 aa26.8■■□□□ 1.88
TRIM39-210ENST00000440271 ZNF280AP59817 542 aaPredicted RBP26.8■■□□□ 1.88
TRIM39-210ENST00000440271 ANKIB1Q9P2G1 1089 aa26.8■■□□□ 1.88
TRIM39-210ENST00000440271 SOX10P56693 466 aa26.79■■□□□ 1.88
TRIM39-210ENST00000440271 SCARF1Q14162 830 aa26.79■■□□□ 1.88
TRIM39-210ENST00000440271 ANGEL2Q5VTE6 544 aaKnown RBP26.79■■□□□ 1.88
TRIM39-210ENST00000440271 DUSP27Q5VZP5 1158 aa26.79■■□□□ 1.88
TRIM39-210ENST00000440271 ZBTB38Q8NAP3 1195 aaPredicted RBP26.79■■□□□ 1.88
TRIM39-210ENST00000440271 RUNDC1Q96C34 613 aa26.79■■□□□ 1.88
TRIM39-210ENST00000440271 GGA1Q9UJY5 639 aa26.79■■□□□ 1.88
TRIM39-210ENST00000440271 SCN9AQ15858 1988 aa26.78■■□□□ 1.88
TRIM39-210ENST00000440271 RSBN1LQ6PCB5 846 aaPredicted RBP26.78■■□□□ 1.88
TRIM39-210ENST00000440271 RIC3Q7Z5B4 369 aa26.78■■□□□ 1.88
TRIM39-210ENST00000440271 AGBL3Q8NEM8 1001 aa26.78■■□□□ 1.88
TRIM39-210ENST00000440271 PCDH10Q9P2E7 1040 aa26.78■■□□□ 1.88
TRIM39-210ENST00000440271 REM2Q8IYK8 340 aaPredicted RBP26.77■■□□□ 1.88
TRIM39-210ENST00000440271 HSP90B1P14625 803 aaKnown RBP26.76■■□□□ 1.87
TRIM39-210ENST00000440271 CTU1Q7Z7A3 348 aaKnown RBP26.76■■□□□ 1.87
TRIM39-210ENST00000440271 RASAL3Q86YV0 1011 aa26.76■■□□□ 1.87
TRIM39-210ENST00000440271 AKAP11Q9UKA4 1901 aa26.75■■□□□ 1.87
TRIM39-210ENST00000440271 PDE4DIPQ5VU43 2346 aa26.74■■□□□ 1.87
TRIM39-210ENST00000440271 FKBP1BP68106 108 aa26.74■■□□□ 1.87
TRIM39-210ENST00000440271 GOLGA2Q08379 1002 aa26.74■■□□□ 1.87
TRIM39-210ENST00000440271 CCDC152Q4G0S7 254 aa26.74■■□□□ 1.87
TRIM39-210ENST00000440271 GMLQ99445 158 aa26.74■■□□□ 1.87
TRIM39-210ENST00000440271 ZNF609O15014 1411 aa26.73■■□□□ 1.87
TRIM39-210ENST00000440271 USP17L8P0C7I0 530 aa26.73■■□□□ 1.87
TRIM39-210ENST00000440271 MYD88Q99836 296 aa26.73■■□□□ 1.87
TRIM39-210ENST00000440271 PHAXQ9H814 394 aaKnown RBP26.73■■□□□ 1.87
TRIM39-210ENST00000440271 MYOZ2Q9NPC6 264 aa26.73■■□□□ 1.87
TRIM39-210ENST00000440271 MBIPQ9NS73 344 aa26.73■■□□□ 1.87
TRIM39-210ENST00000440271 PDE8AO60658 829 aa26.71■■□□□ 1.87
TRIM39-210ENST00000440271 PCCAP05165 728 aaPredicted RBP26.71■■□□□ 1.87
TRIM39-210ENST00000440271 CCDC191Q8NCU4 936 aa26.71■■□□□ 1.87
TRIM39-210ENST00000440271 JARID2Q92833 1246 aaPredicted RBP26.71■■□□□ 1.87
TRIM39-210ENST00000440271 CCDC85AQ96PX6 553 aaPredicted RBP26.71■■□□□ 1.87
TRIM39-210ENST00000440271 XDHP47989 1333 aa26.7■■□□□ 1.87
TRIM39-210ENST00000440271 PITPNM2Q9BZ72 1349 aa26.7■■□□□ 1.87
TRIM39-210ENST00000440271 WDR43Q15061 677 aaKnown RBP eCLIP26.7■■□□□ 1.86
TRIM39-210ENST00000440271 MOB2Q70IA6 237 aa26.7■■□□□ 1.86
TRIM39-210ENST00000440271 ADAMTS8Q9UP79 889 aa26.7■■□□□ 1.86
TRIM39-210ENST00000440271 MYBBP1AQ9BQG0 1328 aaKnown RBP26.69■■□□□ 1.86
TRIM39-210ENST00000440271 USP17L3A6NCW0 530 aa26.69■■□□□ 1.86
TRIM39-210ENST00000440271 USP17L4A6NCW7 530 aa26.69■■□□□ 1.86
TRIM39-210ENST00000440271 USP17L1Q7RTZ2 530 aa26.69■■□□□ 1.86
TRIM39-210ENST00000440271 PODNQ7Z5L7 613 aa26.69■■□□□ 1.86
TRIM39-210ENST00000440271 ANKRD18AQ8IVF6 992 aa26.69■■□□□ 1.86
TRIM39-210ENST00000440271 SCAF8Q9UPN6 1271 aaKnown RBP26.69■■□□□ 1.86
TRIM39-210ENST00000440271 ATP2B4P23634 1241 aa26.68■■□□□ 1.86
TRIM39-210ENST00000440271 UBE2Q2LH0YL09 131 aa26.67■■□□□ 1.86
TRIM39-210ENST00000440271 ZNF853P0CG23 659 aa26.67■■□□□ 1.86
TRIM39-210ENST00000440271 CWC25Q9NXE8 425 aaPredicted RBP26.67■■□□□ 1.86
TRIM39-210ENST00000440271 HPS5Q9UPZ3 1129 aa26.67■■□□□ 1.86
TRIM39-210ENST00000440271 PAPPA2Q9BXP8 1791 aa26.66■■□□□ 1.86
TRIM39-210ENST00000440271 ELL2O00472 640 aaPredicted RBP26.66■■□□□ 1.86
TRIM39-210ENST00000440271 PRAMEF18Q5VWM3 479 aa26.66■■□□□ 1.86
TRIM39-210ENST00000440271 WTIPA6NIX2 430 aaPredicted RBP26.65■■□□□ 1.86
TRIM39-210ENST00000440271 TBC1D8O95759 1140 aa26.65■■□□□ 1.86
TRIM39-210ENST00000440271 PKN2Q16513 984 aaKnown RBP26.65■■□□□ 1.86
TRIM39-210ENST00000440271 NBPF9Q3BBW0 867 aa26.65■■□□□ 1.86
TRIM39-210ENST00000440271 HDAC9Q9UKV0 1011 aa26.65■■□□□ 1.86
TRIM39-210ENST00000440271 ZNF296Q8WUU4 475 aaPredicted RBP26.64■■□□□ 1.86
TRIM39-210ENST00000440271 METTL22Q9BUU2 404 aaPredicted RBP26.64■■□□□ 1.86
TRIM39-210ENST00000440271 PSME4Q14997 1843 aa26.64■■□□□ 1.85
TRIM39-210ENST00000440271 TM4SF4P48230 202 aa26.62■■□□□ 1.85
TRIM39-210ENST00000440271 TTLL12Q14166 644 aaPredicted RBP26.62■■□□□ 1.85
TRIM39-210ENST00000440271 CDC5LQ99459 802 aaKnown RBP26.62■■□□□ 1.85
TRIM39-210ENST00000440271 IFT57Q9NWB7 429 aa26.62■■□□□ 1.85
TRIM39-210ENST00000440271 DACT2Q5SW24 774 aa26.61■■□□□ 1.85
TRIM39-210ENST00000440271 PRPF38BQ5VTL8 546 aaKnown RBP26.61■■□□□ 1.85
TRIM39-210ENST00000440271 MXD3Q9BW11 206 aa26.61■■□□□ 1.85
TRIM39-210ENST00000440271 MINPP1Q9UNW1 487 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms