RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-213	ENST00000439732	ANKRD44	Q8N8A2	993 aa		11.9	□□□□□ -0.5
SMARCA2-213	ENST00000439732	CNNM1	Q9NRU3	951 aa		11.9	□□□□□ -0.5
SMARCA2-213	ENST00000439732	TNN	Q9UQP3	1299 aa		11.9	□□□□□ -0.5
SMARCA2-213	ENST00000439732	LRRFIP2	Q9Y608	721 aa	Known RBP	11.9	□□□□□ -0.5
SMARCA2-213	ENST00000439732	PPIP5K2	O43314	1243 aa		11.89	□□□□□ -0.51
SMARCA2-213	ENST00000439732	RLBP1	P12271	317 aa		11.89	□□□□□ -0.51
SMARCA2-213	ENST00000439732	ATP2B4	P23634	1241 aa		11.89	□□□□□ -0.51
SMARCA2-213	ENST00000439732	GPSM2	P81274	684 aa		11.89	□□□□□ -0.51
SMARCA2-213	ENST00000439732	WASHC4	Q2M389	1173 aa		11.89	□□□□□ -0.51
SMARCA2-213	ENST00000439732	PANK1	Q8TE04	598 aa		11.89	□□□□□ -0.51
SMARCA2-213	ENST00000439732	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.89	□□□□□ -0.51
SMARCA2-213	ENST00000439732	LEMD3	Q9Y2U8	911 aa		11.89	□□□□□ -0.51
SMARCA2-213	ENST00000439732	ZBTB7B	O15156	539 aa	Predicted RBP	11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	PLIN1	O60240	522 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	UFL1	O94874	794 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	PRELP	P51888	382 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	KIAA2012	Q0VF49	1180 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	NIM1K	Q8IY84	436 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	TBC1D16	Q8TBP0	767 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	POLL	Q9UGP5	575 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	FBXO3	Q9UK99	471 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	DDX19B	Q9UMR2	479 aa		11.88	□□□□□ -0.51
SMARCA2-213	ENST00000439732	KDM2B	Q8NHM5	1336 aa		11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	SNED1	Q8TER0	1413 aa		11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	LRRC37A	A6NMS7	1700 aa		11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732		G3V3G9	751 aa		11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	KCNJ4	P48050	445 aa		11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	EIF6	P56537	245 aa	Known RBP	11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	MVP	Q14764	893 aa	Known RBP	11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	DCAF8	Q5TAQ9	597 aa		11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	ZNF594	Q96JF6	807 aa	Predicted RBP	11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	ZNRF3	Q9ULT6	936 aa		11.87	□□□□□ -0.51
SMARCA2-213	ENST00000439732	MROH5	Q6ZUA9	1318 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	GLTPD2	A6NH11	291 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	FZD9	O00144	591 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	SRGAP3	O43295	1099 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	CHRND	Q07001	517 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	MTX1	Q13505	466 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	AOC3	Q16853	763 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	COG6	Q9Y2V7	657 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	RIPOR2	Q9Y4F9	1068 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	ZNF804B	A4D1E1	1349 aa		11.86	□□□□□ -0.51
SMARCA2-213	ENST00000439732	EYA2	O00167	538 aa		11.85	□□□□□ -0.51
SMARCA2-213	ENST00000439732	RIMBP2	O15034	1052 aa		11.85	□□□□□ -0.51
SMARCA2-213	ENST00000439732	TNIP1	Q15025	636 aa		11.85	□□□□□ -0.51
SMARCA2-213	ENST00000439732	COPRS	Q9NQ92	184 aa		11.85	□□□□□ -0.51
SMARCA2-213	ENST00000439732	SPEF2	Q9C093	1822 aa		11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	CIAO1	O76071	339 aa		11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	RFX5	P48382	616 aa	Predicted RBP	11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	RRP1	P56182	461 aa	Known RBP	11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	ATP8B2	P98198	1209 aa		11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	PTPN12	Q05209	780 aa	Known RBP	11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	UBE4A	Q14139	1066 aa		11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	METTL24	Q5JXM2	366 aa		11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	SLC51A	Q86UW1	340 aa		11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	HELB	Q8NG08	1087 aa	Predicted RBP	11.84	□□□□□ -0.51
SMARCA2-213	ENST00000439732	TAF5L	O75529	589 aa		11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	IL15	P40933	162 aa	Predicted RBP	11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	C15orf52	Q6ZUT6	534 aa	Known RBP	11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	PODN	Q7Z5L7	613 aa		11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	GPC2	Q8N158	579 aa		11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	KLHDC4	Q8TBB5	520 aa		11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	PUS3	Q9BZE2	481 aa	Known RBP	11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	ZBTB40	Q9NUA8	1239 aa		11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	CEP126	Q9P2H0	1117 aa		11.83	□□□□□ -0.52
SMARCA2-213	ENST00000439732	MED23	Q9ULK4	1368 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	COL4A1	P02462	1669 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	ECE2	O60344	883 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	PDE8B	O95263	885 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	VEGFA	P15692	232 aa	Predicted RBP	11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	DOK7	Q18PE1	504 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	LRRC24	Q50LG9	513 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	C20orf194	Q5TEA3	1177 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	CIAPIN1	Q6FI81	312 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	ZNF526	Q8TF50	670 aa	Predicted RBP	11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	COA1	Q9GZY4	146 aa		11.82	□□□□□ -0.52
SMARCA2-213	ENST00000439732	LTBP1	Q14766	1721 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	IQCA1L	A6NCM1	817 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	HMMR	O75330	724 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	CXCL9	Q07325	125 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	POLA2	Q14181	598 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	ATG9A	Q7Z3C6	839 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	ZNF804A	Q7Z570	1209 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	SSH3	Q8TE77	659 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	GPR101	Q96P66	508 aa	Predicted RBP	11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	SIL1	Q9H173	461 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	DBNDD1	Q9H9R9	158 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	RRAGC	Q9HB90	399 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	GJA3	Q9Y6H8	435 aa		11.81	□□□□□ -0.52
SMARCA2-213	ENST00000439732	TIAM2	Q8IVF5	1701 aa		11.8	□□□□□ -0.52
SMARCA2-213	ENST00000439732	DUOX1	Q9NRD9	1551 aa		11.8	□□□□□ -0.52
SMARCA2-213	ENST00000439732	PNMA6E	A0A0J9YXQ4	647 aa		11.8	□□□□□ -0.52
SMARCA2-213	ENST00000439732	DDN	O94850	711 aa	Predicted RBP	11.8	□□□□□ -0.52
SMARCA2-213	ENST00000439732	IFIT1	P09914	478 aa	Known RBP	11.8	□□□□□ -0.52
SMARCA2-213	ENST00000439732	AAMP	Q13685	434 aa		11.8	□□□□□ -0.52
SMARCA2-213	ENST00000439732	PUM3	Q15397	648 aa	Known RBP	11.8	□□□□□ -0.52

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