RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 HSP90B1P14625 803 aaKnown RBP14.15□□□□□ -0.14
SMAD3-202ENST00000439724 PTMSP20962 102 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 CCDC158Q5M9N0 1113 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 RNF20Q5VTR2 975 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 USPL1Q5W0Q7 1092 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 LDHAL6AQ6ZMR3 332 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 LINC00116Q8NCU8 138 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 XAGE2Q96GT9 111 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 HMG20BQ9P0W2 317 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 ZNF652Q9Y2D9 606 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 NDUFB9Q9Y6M9 179 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 LY75O60449 1722 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 GOLIM4O00461 696 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 NTSR2O95665 410 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 CASTP20810 708 aaKnown RBP14.14□□□□□ -0.15
SMAD3-202ENST00000439724 ADORA1P30542 326 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 KCNJ4P48050 445 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 ATP2B3Q16720 1220 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 TSGA10IPQ3SY00 556 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 MCMDC2Q4G0Z9 681 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 METTL24Q5JXM2 366 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 VPS53Q5VIR6 699 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 CLEC4GQ6UXB4 293 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 VGLL2Q8N8G2 317 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
SMAD3-202ENST00000439724 CNNM1Q9NRU3 951 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 HELLSQ9NRZ9 838 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 SBF2Q86WG5 1849 aa14.14□□□□□ -0.15
SMAD3-202ENST00000439724 AK2P54819 239 aa14.13□□□□□ -0.15
SMAD3-202ENST00000439724 ADCK5Q3MIX3 580 aa14.13□□□□□ -0.15
SMAD3-202ENST00000439724 TTC39AQ5SRH9 613 aa14.13□□□□□ -0.15
SMAD3-202ENST00000439724 ZMYM1Q5SVZ6 1142 aa14.13□□□□□ -0.15
SMAD3-202ENST00000439724 RC3H1Q5TC82 1133 aaKnown RBP14.13□□□□□ -0.15
SMAD3-202ENST00000439724 ZNF512BQ96KM6 892 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-202ENST00000439724 NIP7Q9Y221 180 aaKnown RBP eCLIP14.13□□□□□ -0.15
SMAD3-202ENST00000439724 MYH7P12883 1935 aa14.13□□□□□ -0.15
SMAD3-202ENST00000439724 ATRNO75882 1429 aa14.12□□□□□ -0.15
SMAD3-202ENST00000439724 PSMA5P28066 241 aa14.12□□□□□ -0.15
SMAD3-202ENST00000439724 GORABQ5T7V8 394 aa14.12□□□□□ -0.15
SMAD3-202ENST00000439724 RUFY3Q7L099 469 aa14.12□□□□□ -0.15
SMAD3-202ENST00000439724 GJD4Q96KN9 370 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-202ENST00000439724 LIMCH1Q9UPQ0 1083 aa14.12□□□□□ -0.15
SMAD3-202ENST00000439724 CYP46A1Q9Y6A2 500 aa14.12□□□□□ -0.15
SMAD3-202ENST00000439724 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-202ENST00000439724 AKAP11Q9UKA4 1901 aa14.12□□□□□ -0.15
SMAD3-202ENST00000439724 TAF1LQ8IZX4 1826 aa14.12□□□□□ -0.15
SMAD3-202ENST00000439724 LRRFIP1Q32MZ4 808 aaKnown RBP14.11□□□□□ -0.15
SMAD3-202ENST00000439724 MEX3CQ5U5Q3 659 aaKnown RBP14.11□□□□□ -0.15
SMAD3-202ENST00000439724 NOL8Q76FK4 1167 aaKnown RBP14.11□□□□□ -0.15
SMAD3-202ENST00000439724 PDRG1Q9NUG6 133 aa14.11□□□□□ -0.15
SMAD3-202ENST00000439724 MROH5Q6ZUA9 1318 aa14.11□□□□□ -0.15
SMAD3-202ENST00000439724 COL24A1Q17RW2 1714 aa14.11□□□□□ -0.15
SMAD3-202ENST00000439724 RNF113AO15541 343 aaKnown RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 PDE8BO95263 885 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 BAG4O95429 457 aaKnown RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 HCLS1P14317 486 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 KRT32Q14532 448 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 CCDC152Q4G0S7 254 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 ZSCAN31Q96LW9 406 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 DSCC1Q9BVC3 393 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 ALDH8A1Q9H2A2 487 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 CASZ1Q86V15 1759 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 GOLGA6L22H0YM25 854 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 TRAK2O60296 914 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 ONECUT3O60422 494 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 RPS6KA4O75676 772 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 ZFYP08048 801 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 HSPA1LP34931 641 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 PKP1Q13835 747 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 CCDC129Q6ZRS4 1044 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 PTF1AQ7RTS3 328 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 SEC62Q99442 399 aaKnown RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 SH2B1Q9NRF2 756 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-202ENST00000439724 ZDHHC9Q9Y397 364 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 AFF2P51816 1311 aa14.1□□□□□ -0.15
SMAD3-202ENST00000439724 CHGBP05060 677 aa14.09□□□□□ -0.15
SMAD3-202ENST00000439724 CPA1P15085 419 aa14.09□□□□□ -0.15
SMAD3-202ENST00000439724 FGFR2P21802 821 aa14.09□□□□□ -0.15
SMAD3-202ENST00000439724 PUM3Q15397 648 aaKnown RBP14.09□□□□□ -0.15
SMAD3-202ENST00000439724 MAST3O60307 1309 aa14.09□□□□□ -0.15
SMAD3-202ENST00000439724 BRD1O95696 1058 aa14.08□□□□□ -0.16
SMAD3-202ENST00000439724 RPS6KB1P23443 525 aa14.08□□□□□ -0.16
SMAD3-202ENST00000439724 ARID4AP29374 1257 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-202ENST00000439724 FKBP4Q02790 459 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMAD3-202ENST00000439724 SCARF1Q14162 830 aa14.08□□□□□ -0.16
SMAD3-202ENST00000439724 SKOR2Q2VWA4 1001 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-202ENST00000439724 BLOC1S2Q6QNY1 142 aa14.08□□□□□ -0.16
SMAD3-202ENST00000439724 TRPC5Q9UL62 973 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-202ENST00000439724 A0A1B0GUL6 1792 aa14.08□□□□□ -0.16
SMAD3-202ENST00000439724 FAM177BA6PVY3 158 aa14.07□□□□□ -0.16
SMAD3-202ENST00000439724 UQCRFS1P1P0C7P4 283 aa14.07□□□□□ -0.16
SMAD3-202ENST00000439724 ZAP70P43403 619 aa14.07□□□□□ -0.16
SMAD3-202ENST00000439724 ANKRD1Q15327 319 aa14.07□□□□□ -0.16
SMAD3-202ENST00000439724 LPIN2Q92539 896 aa14.07□□□□□ -0.16
SMAD3-202ENST00000439724 NARFQ9UHQ1 456 aa14.07□□□□□ -0.16
SMAD3-202ENST00000439724 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-202ENST00000439724 SLC5A1P13866 664 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 IGHMBP2P38935 993 aaKnown RBP14.06□□□□□ -0.16
SMAD3-202ENST00000439724 MCAMP43121 646 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 KCNQ4P56696 695 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms