RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 MYH16Q9H6N6 1097 aa25.97■■□□□ 1.75
NCKIPSD-206ENST00000439518 PSMD14O00487 310 aa25.96■■□□□ 1.75
NCKIPSD-206ENST00000439518 ECE2O60344 883 aa25.96■■□□□ 1.75
NCKIPSD-206ENST00000439518 DOK7Q18PE1 504 aa25.96■■□□□ 1.75
NCKIPSD-206ENST00000439518 LINS1Q8NG48 757 aa25.96■■□□□ 1.75
NCKIPSD-206ENST00000439518 ZC3H12CQ9C0D7 883 aaKnown RBP25.96■■□□□ 1.75
NCKIPSD-206ENST00000439518 ANKIB1Q9P2G1 1089 aa25.96■■□□□ 1.75
NCKIPSD-206ENST00000439518 CNOT7Q9UIV1 285 aaKnown RBP25.96■■□□□ 1.75
NCKIPSD-206ENST00000439518 UFL1O94874 794 aa25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 HIRAP54198 1017 aaPredicted RBP25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 CASP7P55210 303 aa25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 DPF2Q92785 391 aa25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 CDC5LQ99459 802 aaKnown RBP25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 GREM2Q9H772 168 aa25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 KCNQ5Q9NR82 932 aa25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 PGAP2Q9UHJ9 254 aa25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 GGA1Q9UJY5 639 aa25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 ZBTB12Q9Y330 459 aaPredicted RBP25.95■■□□□ 1.74
NCKIPSD-206ENST00000439518 ZNF521Q96K83 1311 aa25.94■■□□□ 1.74
NCKIPSD-206ENST00000439518 HSPA1AP0DMV8 641 aaKnown RBP25.94■■□□□ 1.74
NCKIPSD-206ENST00000439518 HSPA1BP0DMV9 641 aaKnown RBP25.94■■□□□ 1.74
NCKIPSD-206ENST00000439518 FMR1Q06787 632 aaKnown RBP eCLIP25.94■■□□□ 1.74
NCKIPSD-206ENST00000439518 PLA2G12BQ9BX93 195 aa25.94■■□□□ 1.74
NCKIPSD-206ENST00000439518 XDHP47989 1333 aa25.93■■□□□ 1.74
NCKIPSD-206ENST00000439518 SHTN1A0MZ66 631 aa25.93■■□□□ 1.74
NCKIPSD-206ENST00000439518 TRPM4Q8TD43 1214 aa25.93■■□□□ 1.74
NCKIPSD-206ENST00000439518 ZC3H15Q8WU90 426 aaKnown RBP25.93■■□□□ 1.74
NCKIPSD-206ENST00000439518 MYH3P11055 1940 aa25.92■■□□□ 1.74
NCKIPSD-206ENST00000439518 RASSF10A6NK89 507 aa25.92■■□□□ 1.74
NCKIPSD-206ENST00000439518 TRAF5O00463 557 aa25.92■■□□□ 1.74
NCKIPSD-206ENST00000439518 VEGFBP49765 207 aa25.92■■□□□ 1.74
NCKIPSD-206ENST00000439518 MICALL2Q8IY33 904 aa25.92■■□□□ 1.74
NCKIPSD-206ENST00000439518 BSDC1Q9NW68 430 aaPredicted RBP25.92■■□□□ 1.74
NCKIPSD-206ENST00000439518 H7C1D1 291 aa25.91■■□□□ 1.74
NCKIPSD-206ENST00000439518 MINPP1Q9UNW1 487 aa25.91■■□□□ 1.74
NCKIPSD-206ENST00000439518 RPS12P25398 132 aaKnown RBP25.9■■□□□ 1.74
NCKIPSD-206ENST00000439518 CST9Q5W186 159 aa25.9■■□□□ 1.74
NCKIPSD-206ENST00000439518 F6X3S4 739 aa25.89■■□□□ 1.74
NCKIPSD-206ENST00000439518 CSF1RP07333 972 aa25.89■■□□□ 1.74
NCKIPSD-206ENST00000439518 VIL1P09327 827 aaKnown RBP25.89■■□□□ 1.74
NCKIPSD-206ENST00000439518 ATP2B4P23634 1241 aa25.89■■□□□ 1.74
NCKIPSD-206ENST00000439518 DEFB115Q30KQ5 88 aa25.89■■□□□ 1.74
NCKIPSD-206ENST00000439518 COL13A1Q5TAT6 717 aaPredicted RBP25.89■■□□□ 1.74
NCKIPSD-206ENST00000439518 SCN9AQ15858 1988 aa25.89■■□□□ 1.73
NCKIPSD-206ENST00000439518 WTIPA6NIX2 430 aaPredicted RBP25.88■■□□□ 1.73
NCKIPSD-206ENST00000439518 BEND3Q5T5X7 828 aa25.88■■□□□ 1.73
NCKIPSD-206ENST00000439518 ABT1Q9ULW3 272 aaKnown RBP25.88■■□□□ 1.73
NCKIPSD-206ENST00000439518 GLIS2Q9BZE0 524 aaPredicted RBP25.87■■□□□ 1.73
NCKIPSD-206ENST00000439518 G3V3G9 751 aa25.86■■□□□ 1.73
NCKIPSD-206ENST00000439518 ITGA6P23229 1130 aa25.86■■□□□ 1.73
NCKIPSD-206ENST00000439518 DCAF8Q5TAQ9 597 aa25.86■■□□□ 1.73
NCKIPSD-206ENST00000439518 SAMD7Q7Z3H4 446 aa25.86■■□□□ 1.73
NCKIPSD-206ENST00000439518 TRPM7Q96QT4 1865 aa25.85■■□□□ 1.73
NCKIPSD-206ENST00000439518 EGFRP00533 1210 aa25.85■■□□□ 1.73
NCKIPSD-206ENST00000439518 FAM161AQ3B820 660 aa25.85■■□□□ 1.73
NCKIPSD-206ENST00000439518 ZNF609O15014 1411 aa25.84■■□□□ 1.73
NCKIPSD-206ENST00000439518 IGHMBP2P38935 993 aaKnown RBP25.84■■□□□ 1.73
NCKIPSD-206ENST00000439518 TBC1D10BQ4KMP7 808 aaPredicted RBP25.84■■□□□ 1.73
NCKIPSD-206ENST00000439518 CDC37L1Q7L3B6 337 aa25.84■■□□□ 1.73
NCKIPSD-206ENST00000439518 MED23Q9ULK4 1368 aa25.83■■□□□ 1.73
NCKIPSD-206ENST00000439518 CCT4P50991 539 aaKnown RBP25.83■■□□□ 1.73
NCKIPSD-206ENST00000439518 PODNQ7Z5L7 613 aa25.83■■□□□ 1.73
NCKIPSD-206ENST00000439518 TLL2Q9Y6L7 1015 aa25.83■■□□□ 1.73
NCKIPSD-206ENST00000439518 SPEF2Q9C093 1822 aa25.83■■□□□ 1.73
NCKIPSD-206ENST00000439518 FOXO4P98177 505 aa25.82■■□□□ 1.72
NCKIPSD-206ENST00000439518 WDR33Q9C0J8 1336 aaKnown RBP25.82■■□□□ 1.72
NCKIPSD-206ENST00000439518 CELF2O95319 508 aaKnown RBP25.81■■□□□ 1.72
NCKIPSD-206ENST00000439518 RSBN1LQ6PCB5 846 aaPredicted RBP25.81■■□□□ 1.72
NCKIPSD-206ENST00000439518 AGBL3Q8NEM8 1001 aa25.81■■□□□ 1.72
NCKIPSD-206ENST00000439518 GMLQ99445 158 aa25.81■■□□□ 1.72
NCKIPSD-206ENST00000439518 LEMD3Q9Y2U8 911 aa25.81■■□□□ 1.72
NCKIPSD-206ENST00000439518 ZNF280AP59817 542 aaPredicted RBP25.8■■□□□ 1.72
NCKIPSD-206ENST00000439518 WBP1LQ9NX94 342 aa25.8■■□□□ 1.72
NCKIPSD-206ENST00000439518 PSME4Q14997 1843 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 USP17L3A6NCW0 530 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 USP17L4A6NCW7 530 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 FOXN1O15353 648 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 RBM26Q5T8P6 1007 aaKnown RBP25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 USP17L1Q7RTZ2 530 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 SAPCD2Q86UD0 394 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 USP48Q86UV5 1035 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 MPHOSPH8Q99549 860 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 ANKRD2Q9GZV1 360 aa25.79■■□□□ 1.72
NCKIPSD-206ENST00000439518 ANKRD18BA2A2Z9 1011 aa25.78■■□□□ 1.72
NCKIPSD-206ENST00000439518 E9PSI1 815 aa25.78■■□□□ 1.72
NCKIPSD-206ENST00000439518 GRM8O00222 908 aa25.78■■□□□ 1.72
NCKIPSD-206ENST00000439518 ALDH1L1O75891 902 aa25.78■■□□□ 1.72
NCKIPSD-206ENST00000439518 KIF4BQ2VIQ3 1234 aa25.78■■□□□ 1.72
NCKIPSD-206ENST00000439518 TXNRD3Q86VQ6 643 aa25.78■■□□□ 1.72
NCKIPSD-206ENST00000439518 CAPNS2Q96L46 248 aa25.78■■□□□ 1.72
NCKIPSD-206ENST00000439518 EPHA10Q5JZY3 1008 aa25.77■■□□□ 1.72
NCKIPSD-206ENST00000439518 KRT26Q7Z3Y9 468 aa25.77■■□□□ 1.72
NCKIPSD-206ENST00000439518 COA1Q9GZY4 146 aa25.77■■□□□ 1.72
NCKIPSD-206ENST00000439518 ZNF804BA4D1E1 1349 aa25.77■■□□□ 1.72
NCKIPSD-206ENST00000439518 ECE1P42892 770 aa25.76■■□□□ 1.71
NCKIPSD-206ENST00000439518 SLFN5Q08AF3 891 aa25.76■■□□□ 1.71
NCKIPSD-206ENST00000439518 IFIT5Q13325 482 aaKnown RBP25.76■■□□□ 1.71
NCKIPSD-206ENST00000439518 CYP4F22Q6NT55 531 aa25.76■■□□□ 1.71
NCKIPSD-206ENST00000439518 DLK2Q6UY11 383 aa25.76■■□□□ 1.71
NCKIPSD-206ENST00000439518 HHIPL1Q96JK4 782 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms