RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
HLA-W-207ENST00000439514 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
HLA-W-207ENST00000439514 TAF1P21675 1872 aa16.56■□□□□ 0.24
HLA-W-207ENST00000439514 G3V3G9 751 aa16.55■□□□□ 0.24
HLA-W-207ENST00000439514 UFL1O94874 794 aa16.55■□□□□ 0.24
HLA-W-207ENST00000439514 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
HLA-W-207ENST00000439514 CCDC57Q2TAC2 916 aa16.55■□□□□ 0.24
HLA-W-207ENST00000439514 FAM161AQ3B820 660 aa16.55■□□□□ 0.24
HLA-W-207ENST00000439514 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
HLA-W-207ENST00000439514 TBC1D16Q8TBP0 767 aa16.55■□□□□ 0.24
HLA-W-207ENST00000439514 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
HLA-W-207ENST00000439514 DUOX1Q9NRD9 1551 aa16.55■□□□□ 0.24
HLA-W-207ENST00000439514 CIAPIN1Q6FI81 312 aa16.54■□□□□ 0.24
HLA-W-207ENST00000439514 LEMD3Q9Y2U8 911 aa16.54■□□□□ 0.24
HLA-W-207ENST00000439514 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
HLA-W-207ENST00000439514 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 POTECB2RU33 542 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 APLP1P51693 650 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 FOXO4P98177 505 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 LDHDQ86WU2 507 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 TAF1DQ9H5J8 278 aaPredicted RBP16.53■□□□□ 0.24
HLA-W-207ENST00000439514 POLLQ9UGP5 575 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 MINPP1Q9UNW1 487 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 GJA3Q9Y6H8 435 aa16.53■□□□□ 0.24
HLA-W-207ENST00000439514 EPHX2P34913 555 aa16.52■□□□□ 0.24
HLA-W-207ENST00000439514 LMBR1LQ6UX01 489 aa16.52■□□□□ 0.24
HLA-W-207ENST00000439514 NOB1Q9ULX3 412 aaKnown RBP16.52■□□□□ 0.24
HLA-W-207ENST00000439514 COL4A5P29400 1685 aa16.52■□□□□ 0.23
HLA-W-207ENST00000439514 MED23Q9ULK4 1368 aa16.51■□□□□ 0.23
HLA-W-207ENST00000439514 RPS12P25398 132 aaKnown RBP16.51■□□□□ 0.23
HLA-W-207ENST00000439514 CXCL9Q07325 125 aa16.51■□□□□ 0.23
HLA-W-207ENST00000439514 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
HLA-W-207ENST00000439514 ECE2O60344 883 aa16.5■□□□□ 0.23
HLA-W-207ENST00000439514 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
HLA-W-207ENST00000439514 USP50Q70EL3 339 aaPredicted RBP16.5■□□□□ 0.23
HLA-W-207ENST00000439514 PODNQ7Z5L7 613 aa16.5■□□□□ 0.23
HLA-W-207ENST00000439514 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
HLA-W-207ENST00000439514 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
HLA-W-207ENST00000439514 KCNJ4P48050 445 aa16.49■□□□□ 0.23
HLA-W-207ENST00000439514 SLC51AQ86UW1 340 aa16.49■□□□□ 0.23
HLA-W-207ENST00000439514 DPF2Q92785 391 aa16.49■□□□□ 0.23
HLA-W-207ENST00000439514 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
HLA-W-207ENST00000439514 COL4A1P02462 1669 aa16.49■□□□□ 0.23
HLA-W-207ENST00000439514 UBTFL1P0CB47 393 aaPredicted RBP16.48■□□□□ 0.23
HLA-W-207ENST00000439514 SCNN1DP51172 638 aa16.48■□□□□ 0.23
HLA-W-207ENST00000439514 LDHAL6AQ6ZMR3 332 aa16.48■□□□□ 0.23
HLA-W-207ENST00000439514 SUCLG2Q96I99 432 aa16.48■□□□□ 0.23
HLA-W-207ENST00000439514 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
HLA-W-207ENST00000439514 DBNDD1Q9H9R9 158 aa16.48■□□□□ 0.23
HLA-W-207ENST00000439514 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
HLA-W-207ENST00000439514 ADARB2Q9NS39 739 aaKnown RBP16.48■□□□□ 0.23
HLA-W-207ENST00000439514 ZNF804BA4D1E1 1349 aa16.47■□□□□ 0.23
HLA-W-207ENST00000439514 ZNF609O15014 1411 aa16.47■□□□□ 0.23
HLA-W-207ENST00000439514 H7C1D1 291 aa16.47■□□□□ 0.23
HLA-W-207ENST00000439514 RAD17O75943 681 aa16.47■□□□□ 0.23
HLA-W-207ENST00000439514 MMP14P50281 582 aa16.47■□□□□ 0.23
HLA-W-207ENST00000439514 CHRNDQ07001 517 aa16.47■□□□□ 0.23
HLA-W-207ENST00000439514 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
HLA-W-207ENST00000439514 COA1Q9GZY4 146 aa16.47■□□□□ 0.23
HLA-W-207ENST00000439514 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
HLA-W-207ENST00000439514 GNAI3P08754 354 aa16.46■□□□□ 0.23
HLA-W-207ENST00000439514 GMPSP49915 693 aaPredicted RBP16.46■□□□□ 0.23
HLA-W-207ENST00000439514 EPHA10Q5JZY3 1008 aa16.46■□□□□ 0.23
HLA-W-207ENST00000439514 INTS3Q68E01 1043 aaKnown RBP16.46■□□□□ 0.23
HLA-W-207ENST00000439514 ATF7IPQ6VMQ6 1270 aa16.46■□□□□ 0.23
HLA-W-207ENST00000439514 BICC1Q9H694 974 aaKnown RBP16.46■□□□□ 0.23
HLA-W-207ENST00000439514 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
HLA-W-207ENST00000439514 SPEF2Q9C093 1822 aa16.46■□□□□ 0.23
HLA-W-207ENST00000439514 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
HLA-W-207ENST00000439514 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
HLA-W-207ENST00000439514 ZKSCAN2Q63HK3 967 aa16.45■□□□□ 0.22
HLA-W-207ENST00000439514 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
HLA-W-207ENST00000439514 AGBL3Q8NEM8 1001 aa16.45■□□□□ 0.22
HLA-W-207ENST00000439514 ZC3H15Q8WU90 426 aaKnown RBP16.45■□□□□ 0.22
HLA-W-207ENST00000439514 MYO3BQ8WXR4 1341 aa16.45■□□□□ 0.22
HLA-W-207ENST00000439514 PSMD14O00487 310 aa16.44■□□□□ 0.22
HLA-W-207ENST00000439514 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
HLA-W-207ENST00000439514 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
HLA-W-207ENST00000439514 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
HLA-W-207ENST00000439514 USP17L3A6NCW0 530 aa16.43■□□□□ 0.22
HLA-W-207ENST00000439514 USP17L4A6NCW7 530 aa16.43■□□□□ 0.22
HLA-W-207ENST00000439514 EPS15P42566 896 aa16.43■□□□□ 0.22
HLA-W-207ENST00000439514 USP17L1Q7RTZ2 530 aa16.43■□□□□ 0.22
HLA-W-207ENST00000439514 ZNF804AQ7Z570 1209 aa16.43■□□□□ 0.22
HLA-W-207ENST00000439514 FRAT1Q92837 279 aaPredicted RBP16.43■□□□□ 0.22
HLA-W-207ENST00000439514 CNOT7Q9UIV1 285 aaKnown RBP16.43■□□□□ 0.22
HLA-W-207ENST00000439514 ADAMTSL1Q8N6G6 1762 aa16.43■□□□□ 0.22
HLA-W-207ENST00000439514 MS4A1P11836 297 aa16.42■□□□□ 0.22
HLA-W-207ENST00000439514 TRIM27P14373 513 aa16.42■□□□□ 0.22
HLA-W-207ENST00000439514 UBE4AQ14139 1066 aa16.42■□□□□ 0.22
HLA-W-207ENST00000439514 STRIP1Q5VSL9 837 aa16.42■□□□□ 0.22
HLA-W-207ENST00000439514 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
HLA-W-207ENST00000439514 GPR101Q96P66 508 aaPredicted RBP16.42■□□□□ 0.22
HLA-W-207ENST00000439514 BCAR3O75815 825 aa16.41■□□□□ 0.22
HLA-W-207ENST00000439514 RSBN1LQ6PCB5 846 aaPredicted RBP16.41■□□□□ 0.22
HLA-W-207ENST00000439514 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
HLA-W-207ENST00000439514 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
HLA-W-207ENST00000439514 PSME4Q14997 1843 aa16.4■□□□□ 0.22
HLA-W-207ENST00000439514 CNTROBQ8N137 903 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms