RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 FEZ1Q99689 392 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.32□□□□□ -1.24
BDNF-211ENST00000439476 FEZ2Q9UHY8 353 aaPredicted RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 V9GYY5 206 aaPredicted RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 SOS1Q07889 1333 aaPredicted RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 FOXO3O43524 673 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 ANXA1P04083 346 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 CCT2P78371 535 aaKnown RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 BIN2Q9UBW5 565 aaPredicted RBP7.32□□□□□ -1.24
BDNF-211ENST00000439476 PALD1Q9ULE6 856 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 ABCC1P33527 1531 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 KIF24Q5T7B8 1368 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 ACEP12821 1306 aa7.32□□□□□ -1.24
BDNF-211ENST00000439476 PPP1R12BO60237 982 aaPredicted RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 BMS1Q14692 1282 aaKnown RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 MTHFSDQ2M296 383 aaKnown RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 TMC6Q7Z403 805 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 DBF4Q9UBU7 674 aaPredicted RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 POLR3GO15318 223 aaPredicted RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 U2AF2P26368 475 aaKnown RBP eCLIP7.31□□□□□ -1.24
BDNF-211ENST00000439476 ZFYVE27Q5T4F4 411 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 NEK1Q96PY6 1258 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 DNAI2Q9GZS0 605 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 ZSCAN16Q9H4T2 348 aaPredicted RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 HMG20BQ9P0W2 317 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 SNX14Q9Y5W7 946 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 BIN1O00499 593 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 DTNBO60941 627 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 CABP4P57796 275 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 SEPT7Q16181 437 aaKnown RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 VPS36Q86VN1 386 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 C10orf67Q8IYJ2 551 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 CRACR2AQ9BSW2 395 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 BCL2L12Q9HB09 334 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 OGFRQ9NZT2 677 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 NPATQ14207 1427 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 RTL1A6NKG5 1358 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 PNMA6EA0A0J9YXQ4 647 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 KIF1CO43896 1103 aaKnown RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 KANK3Q6NY19 840 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 SYTL4Q96C24 671 aaPredicted RBP7.31□□□□□ -1.24
BDNF-211ENST00000439476 RAB34Q9BZG1 259 aa7.31□□□□□ -1.24
BDNF-211ENST00000439476 SGSM2O43147 1006 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 KIF5CO60282 957 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 PPFIA3O75145 1194 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 MICALCLQ6ZW33 695 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 CCDC91Q7Z6B0 441 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 MPHOSPH8Q99549 860 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 CXorf56Q9H5V9 222 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.3□□□□□ -1.24
BDNF-211ENST00000439476 TRPM2O94759 1503 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.3□□□□□ -1.24
BDNF-211ENST00000439476 YTHDC2Q9H6S0 1430 aaKnown RBP7.3□□□□□ -1.24
BDNF-211ENST00000439476 SHTN1A0MZ66 631 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 CAND2O75155 1236 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 POTEJP0CG39 1038 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 SCP2P22307 547 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 HSPA4P34932 840 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 FKBP4Q02790 459 aaKnown RBP eCLIP7.3□□□□□ -1.24
BDNF-211ENST00000439476 FAM173BQ6P4H8 233 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 BRF1Q92994 677 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 C8orf76Q96K31 380 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 RNF41Q9H4P4 317 aaPredicted RBP7.3□□□□□ -1.24
BDNF-211ENST00000439476 MAP3K2Q9Y2U5 619 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 CDC42BPAQ5VT25 1732 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 SLU7O95391 586 aaKnown RBP7.3□□□□□ -1.24
BDNF-211ENST00000439476 RUFY3Q7L099 469 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 STK11IPQ8N1F8 1099 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 NSFL1CQ9UNZ2 370 aaKnown RBP7.3□□□□□ -1.24
BDNF-211ENST00000439476 CFAP65Q6ZU64 1925 aaKnown RBP7.3□□□□□ -1.24
BDNF-211ENST00000439476 PLXNC1O60486 1568 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 TTC41PQ6P2S7 1318 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 RAD50Q92878 1312 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 ATP7AQ04656 1500 aa7.3□□□□□ -1.24
BDNF-211ENST00000439476 TOP1P11387 765 aaKnown RBP7.29□□□□□ -1.24
BDNF-211ENST00000439476 GTF2F1P35269 517 aaKnown RBP eCLIP7.29□□□□□ -1.24
BDNF-211ENST00000439476 IKQ13123 557 aaPredicted RBP7.29□□□□□ -1.24
BDNF-211ENST00000439476 SPA17Q15506 151 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 CREB3L3Q68CJ9 461 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 ITFG2Q969R8 447 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 NCKAP5LQ9HCH0 1330 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 BMP15O95972 392 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 FKBP15Q5T1M5 1219 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 MPRIPQ6WCQ1 1025 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 EHBP1Q8NDI1 1231 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 KIF2CQ99661 725 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 CHPF2Q9P2E5 772 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 USO1O60763 962 aaKnown RBP7.29□□□□□ -1.24
BDNF-211ENST00000439476 EIF5P55010 431 aaKnown RBP7.29□□□□□ -1.24
BDNF-211ENST00000439476 NMIQ13287 307 aaPredicted RBP7.29□□□□□ -1.24
BDNF-211ENST00000439476 CLEC17AQ6ZS10 378 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 KIAA1328Q86T90 577 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 CCDC150Q8NCX0 1101 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 LRRC2Q9BYS8 371 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 NBPF3Q9H094 633 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 STK24Q9Y6E0 443 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 ESCO1Q5FWF5 840 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 AOPEPQ8N6M6 819 aa7.29□□□□□ -1.24
BDNF-211ENST00000439476 NAA15Q9BXJ9 866 aaKnown RBP7.29□□□□□ -1.24
BDNF-211ENST00000439476 KDM4CQ9H3R0 1056 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms