RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 UFL1O94874 794 aa13.2□□□□□ -0.3
MCF2L-216ENST00000439475 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-216ENST00000439475 CCDC57Q2TAC2 916 aa13.2□□□□□ -0.3
MCF2L-216ENST00000439475 TAF7LQ5H9L4 462 aa13.2□□□□□ -0.3
MCF2L-216ENST00000439475 TBC1D16Q8TBP0 767 aa13.2□□□□□ -0.3
MCF2L-216ENST00000439475 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
MCF2L-216ENST00000439475 POLLQ9UGP5 575 aa13.2□□□□□ -0.3
MCF2L-216ENST00000439475 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
MCF2L-216ENST00000439475 SCN4AP35499 1836 aa13.2□□□□□ -0.3
MCF2L-216ENST00000439475 IPO8O15397 1037 aaKnown RBP13.19□□□□□ -0.3
MCF2L-216ENST00000439475 EPHX2P34913 555 aa13.19□□□□□ -0.3
MCF2L-216ENST00000439475 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
MCF2L-216ENST00000439475 CXCL9Q07325 125 aa13.19□□□□□ -0.3
MCF2L-216ENST00000439475 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
MCF2L-216ENST00000439475 SLC51AQ86UW1 340 aa13.19□□□□□ -0.3
MCF2L-216ENST00000439475 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-216ENST00000439475 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
MCF2L-216ENST00000439475 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
MCF2L-216ENST00000439475 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
MCF2L-216ENST00000439475 LEMD3Q9Y2U8 911 aa13.19□□□□□ -0.3
MCF2L-216ENST00000439475 APLP1P51693 650 aa13.18□□□□□ -0.3
MCF2L-216ENST00000439475 RARSP54136 660 aaKnown RBP13.18□□□□□ -0.3
MCF2L-216ENST00000439475 FOXO4P98177 505 aa13.18□□□□□ -0.3
MCF2L-216ENST00000439475 FAM161AQ3B820 660 aa13.18□□□□□ -0.3
MCF2L-216ENST00000439475 EAPPQ56P03 285 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-216ENST00000439475 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
MCF2L-216ENST00000439475 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
MCF2L-216ENST00000439475 KIF16BQ96L93 1317 aa13.17□□□□□ -0.3
MCF2L-216ENST00000439475 LRRC37AA6NMS7 1700 aa13.17□□□□□ -0.3
MCF2L-216ENST00000439475 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
MCF2L-216ENST00000439475 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
MCF2L-216ENST00000439475 UTYO14607 1347 aa13.16□□□□□ -0.3
MCF2L-216ENST00000439475 H7C1D1 291 aa13.16□□□□□ -0.3
MCF2L-216ENST00000439475 ECE2O60344 883 aa13.16□□□□□ -0.3
MCF2L-216ENST00000439475 RAD17O75943 681 aa13.16□□□□□ -0.3
MCF2L-216ENST00000439475 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-216ENST00000439475 KCNJ4P48050 445 aa13.16□□□□□ -0.3
MCF2L-216ENST00000439475 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
MCF2L-216ENST00000439475 USP50Q70EL3 339 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-216ENST00000439475 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
MCF2L-216ENST00000439475 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
MCF2L-216ENST00000439475 ZBED9Q6R2W3 1325 aa13.15□□□□□ -0.3
MCF2L-216ENST00000439475 LDHAL6AQ6ZMR3 332 aa13.15□□□□□ -0.3
MCF2L-216ENST00000439475 PODNQ7Z5L7 613 aa13.15□□□□□ -0.3
MCF2L-216ENST00000439475 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
MCF2L-216ENST00000439475 ZNF804BA4D1E1 1349 aa13.14□□□□□ -0.31
MCF2L-216ENST00000439475 YDJCA8MPS7 323 aa13.14□□□□□ -0.31
MCF2L-216ENST00000439475 RPS12P25398 132 aaKnown RBP13.14□□□□□ -0.31
MCF2L-216ENST00000439475 GMPSP49915 693 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-216ENST00000439475 SCNN1DP51172 638 aa13.14□□□□□ -0.31
MCF2L-216ENST00000439475 CHRNDQ07001 517 aa13.14□□□□□ -0.31
MCF2L-216ENST00000439475 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
MCF2L-216ENST00000439475 DPF2Q92785 391 aa13.14□□□□□ -0.31
MCF2L-216ENST00000439475 GPR101Q96P66 508 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-216ENST00000439475 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
MCF2L-216ENST00000439475 GPRC5DQ9NZD1 345 aa13.14□□□□□ -0.31
MCF2L-216ENST00000439475 COL4A5P29400 1685 aa13.13□□□□□ -0.31
MCF2L-216ENST00000439475 MED23Q9ULK4 1368 aa13.13□□□□□ -0.31
MCF2L-216ENST00000439475 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-216ENST00000439475 EPS15P42566 896 aa13.13□□□□□ -0.31
MCF2L-216ENST00000439475 RABL6Q3YEC7 729 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-216ENST00000439475 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-216ENST00000439475 COA1Q9GZY4 146 aa13.13□□□□□ -0.31
MCF2L-216ENST00000439475 CNOT7Q9UIV1 285 aaKnown RBP13.13□□□□□ -0.31
MCF2L-216ENST00000439475 DUOX1Q9NRD9 1551 aa13.12□□□□□ -0.31
MCF2L-216ENST00000439475 PSMD14O00487 310 aa13.12□□□□□ -0.31
MCF2L-216ENST00000439475 ZNF594Q96JF6 807 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-216ENST00000439475 BICC1Q9H694 974 aaKnown RBP13.12□□□□□ -0.31
MCF2L-216ENST00000439475 COL4A1P02462 1669 aa13.12□□□□□ -0.31
MCF2L-216ENST00000439475 PLIN1O60240 522 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 VIL1P09327 827 aaKnown RBP13.11□□□□□ -0.31
MCF2L-216ENST00000439475 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 ZKSCAN2Q63HK3 967 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 ATF7IPQ6VMQ6 1270 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 CNTROBQ8N137 903 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 AGBL3Q8NEM8 1001 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-216ENST00000439475 SPEF2Q9C093 1822 aa13.11□□□□□ -0.31
MCF2L-216ENST00000439475 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 TAF5LO75529 589 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 BCAR3O75815 825 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 GNAI3P08754 354 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
MCF2L-216ENST00000439475 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
MCF2L-216ENST00000439475 LTBP1Q14766 1721 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 MROH5Q6ZUA9 1318 aa13.1□□□□□ -0.31
MCF2L-216ENST00000439475 UBE4AQ14139 1066 aa13.09□□□□□ -0.31
MCF2L-216ENST00000439475 MAP1SQ66K74 1059 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-216ENST00000439475 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-216ENST00000439475 C15orf52Q6ZUT6 534 aaKnown RBP13.09□□□□□ -0.31
MCF2L-216ENST00000439475 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-216ENST00000439475 FBXW7Q969H0 707 aa13.09□□□□□ -0.31
MCF2L-216ENST00000439475 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
MCF2L-216ENST00000439475 MYO3BQ8WXR4 1341 aa13.09□□□□□ -0.31
MCF2L-216ENST00000439475 MMP14P50281 582 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms