RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 C8orf34Q49A92 452 aa6.38□□□□□ -1.39
VPS41-207ENST00000439468 B4GALNT3Q6L9W6 998 aa6.38□□□□□ -1.39
VPS41-207ENST00000439468 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
VPS41-207ENST00000439468 WFDC8Q8IUA0 241 aa6.38□□□□□ -1.39
VPS41-207ENST00000439468 NACC1Q96RE7 527 aa6.38□□□□□ -1.39
VPS41-207ENST00000439468 FRRS1LQ9P0K9 344 aa6.38□□□□□ -1.39
VPS41-207ENST00000439468 A0A0A0MRY4 1105 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 ZBTB7CA1YPR0 619 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 SOX18P35713 384 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 EIF1AXP47813 144 aaKnown RBP6.37□□□□□ -1.39
VPS41-207ENST00000439468 ZNF211Q13398 564 aaPredicted RBP6.37□□□□□ -1.39
VPS41-207ENST00000439468 GRIK4Q16099 956 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 GDF6Q6KF10 455 aaPredicted RBP6.37□□□□□ -1.39
VPS41-207ENST00000439468 PHLDB3Q6NSJ2 640 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 PLD4Q96BZ4 506 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 SPACA7Q96KW9 195 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 ANO2Q9NQ90 1003 aa6.37□□□□□ -1.39
VPS41-207ENST00000439468 ABI2Q9NYB9 513 aaPredicted RBP6.37□□□□□ -1.39
VPS41-207ENST00000439468 BAG6P46379 1132 aa6.36□□□□□ -1.39
VPS41-207ENST00000439468 HYAL2Q12891 473 aa6.36□□□□□ -1.39
VPS41-207ENST00000439468 ALKBH2Q6NS38 261 aa6.36□□□□□ -1.39
VPS41-207ENST00000439468 BRD1O95696 1058 aa6.35□□□□□ -1.39
VPS41-207ENST00000439468 RPLP1P05386 114 aaKnown RBP6.35□□□□□ -1.39
VPS41-207ENST00000439468 GATA4P43694 442 aa6.35□□□□□ -1.39
VPS41-207ENST00000439468 PDE4CQ08493 712 aa6.35□□□□□ -1.39
VPS41-207ENST00000439468 OR13H1Q8NG92 308 aa6.35□□□□□ -1.39
VPS41-207ENST00000439468 GZF1Q9H116 711 aaPredicted RBP6.35□□□□□ -1.39
VPS41-207ENST00000439468 USP21Q9UK80 565 aa6.35□□□□□ -1.39
VPS41-207ENST00000439468 A6NHS1 94 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 FAM13AO94988 1023 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 PDGFAP04085 211 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 FURINP09958 794 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 ELNP15502 786 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 MZF1P28698 734 aaPredicted RBP6.34□□□□□ -1.39
VPS41-207ENST00000439468 PDE12Q6L8Q7 609 aaKnown RBP6.34□□□□□ -1.39
VPS41-207ENST00000439468 NCAPG2Q86XI2 1143 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 FMR1NBQ8N0W7 255 aaPredicted RBP6.34□□□□□ -1.39
VPS41-207ENST00000439468 IL22RA1Q8N6P7 574 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 ELP3Q9H9T3 547 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 TMEM63CQ9P1W3 806 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 KANSL3Q9P2N6 904 aa6.34□□□□□ -1.39
VPS41-207ENST00000439468 C9orf172C9J069 976 aa6.33□□□□□ -1.4
VPS41-207ENST00000439468 CYP2E1P05181 493 aaPredicted RBP6.33□□□□□ -1.4
VPS41-207ENST00000439468 SF3B2Q13435 895 aaKnown RBP6.33□□□□□ -1.4
VPS41-207ENST00000439468 DOC2BQ14184 412 aa6.33□□□□□ -1.4
VPS41-207ENST00000439468 GRIK5Q16478 980 aa6.33□□□□□ -1.4
VPS41-207ENST00000439468 COL13A1Q5TAT6 717 aaPredicted RBP6.33□□□□□ -1.4
VPS41-207ENST00000439468 SHISA2Q6UWI4 295 aa6.33□□□□□ -1.4
VPS41-207ENST00000439468 POLIQ9UNA4 740 aa6.33□□□□□ -1.4
VPS41-207ENST00000439468 TRIM33Q9UPN9 1127 aa6.33□□□□□ -1.4
VPS41-207ENST00000439468 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
VPS41-207ENST00000439468 FAM177BA6PVY3 158 aa6.32□□□□□ -1.4
VPS41-207ENST00000439468 H3BRB1 525 aa6.32□□□□□ -1.4
VPS41-207ENST00000439468 SMNDC1O75940 238 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS41-207ENST00000439468 HOXD8P13378 290 aaPredicted RBP6.32□□□□□ -1.4
VPS41-207ENST00000439468 ATP11AP98196 1134 aa6.32□□□□□ -1.4
VPS41-207ENST00000439468 FKBP4Q02790 459 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS41-207ENST00000439468 CEP135Q66GS9 1140 aa6.32□□□□□ -1.4
VPS41-207ENST00000439468 TTC9Q92623 222 aa6.32□□□□□ -1.4
VPS41-207ENST00000439468 LACRTQ9GZZ8 138 aa6.32□□□□□ -1.4
VPS41-207ENST00000439468 GGNBP2Q9H3C7 697 aa6.32□□□□□ -1.4
VPS41-207ENST00000439468 TUT1Q9H6E5 874 aaKnown RBP6.32□□□□□ -1.4
VPS41-207ENST00000439468 K7ELQ4 463 aaPredicted RBP6.31□□□□□ -1.4
VPS41-207ENST00000439468 CES1P23141 567 aa6.31□□□□□ -1.4
VPS41-207ENST00000439468 SERPINB4P48594 390 aa6.31□□□□□ -1.4
VPS41-207ENST00000439468 GLYCTKQ8IVS8 523 aa6.31□□□□□ -1.4
VPS41-207ENST00000439468 DTWD1Q8N5C7 304 aa6.31□□□□□ -1.4
VPS41-207ENST00000439468 RASSF4Q9H2L5 321 aa6.31□□□□□ -1.4
VPS41-207ENST00000439468 CNTN3Q9P232 1028 aa6.31□□□□□ -1.4
VPS41-207ENST00000439468 SELPP16109 830 aa6.3□□□□□ -1.4
VPS41-207ENST00000439468 CDC25BP30305 580 aa6.3□□□□□ -1.4
VPS41-207ENST00000439468 NRG1Q02297 640 aaPredicted RBP6.3□□□□□ -1.4
VPS41-207ENST00000439468 KCNA1Q09470 495 aa6.3□□□□□ -1.4
VPS41-207ENST00000439468 FBXO11Q86XK2 927 aa6.3□□□□□ -1.4
VPS41-207ENST00000439468 C1orf127Q8N9H9 656 aa6.3□□□□□ -1.4
VPS41-207ENST00000439468 PHACTR2O75167 634 aa6.29□□□□□ -1.4
VPS41-207ENST00000439468 USP5P45974 858 aa6.29□□□□□ -1.4
VPS41-207ENST00000439468 MBTPS1Q14703 1052 aa6.29□□□□□ -1.4
VPS41-207ENST00000439468 TXNDC11Q6PKC3 985 aa6.29□□□□□ -1.4
VPS41-207ENST00000439468 TXNDC2Q86VQ3 553 aa6.29□□□□□ -1.4
VPS41-207ENST00000439468 CCDC87Q9NVE4 849 aa6.29□□□□□ -1.4
VPS41-207ENST00000439468 ADAM23O75077 832 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 KIF4AO95239 1232 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 NPR3P17342 541 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 EHHADHQ08426 723 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 TXNRD3Q86VQ6 643 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 LENG1Q96BZ8 264 aaPredicted RBP6.28□□□□□ -1.4
VPS41-207ENST00000439468 PBX4Q9BYU1 374 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 EGFL7Q9UHF1 273 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 BRPF3Q9ULD4 1205 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 PPME1Q9Y570 386 aa6.28□□□□□ -1.4
VPS41-207ENST00000439468 LINC01387J3KSC0 135 aa6.27□□□□□ -1.41
VPS41-207ENST00000439468 FZD6O60353 706 aa6.27□□□□□ -1.41
VPS41-207ENST00000439468 ICMTO60725 284 aa6.27□□□□□ -1.41
VPS41-207ENST00000439468 DEAF1O75398 565 aaPredicted RBP6.27□□□□□ -1.41
VPS41-207ENST00000439468 ACPPP15309 386 aa6.27□□□□□ -1.41
VPS41-207ENST00000439468 PTPRAP18433 802 aa6.27□□□□□ -1.41
VPS41-207ENST00000439468 CDC27P30260 824 aa6.27□□□□□ -1.41
VPS41-207ENST00000439468 ADGRE1Q14246 886 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms