RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 ERVV-2B6SEH9 535 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 SIAH2O43255 324 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 WIPF1O43516 503 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 ALDH1A1P00352 501 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 HDAC1Q13547 482 aaPredicted RBP9.68□□□□□ -0.86
HMGB2-202ENST00000438704 TTLL12Q14166 644 aaPredicted RBP9.68□□□□□ -0.86
HMGB2-202ENST00000438704 KRT24Q2M2I5 525 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 PTCRAQ6ISU1 281 aaPredicted RBP9.68□□□□□ -0.86
HMGB2-202ENST00000438704 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
HMGB2-202ENST00000438704 MPRIPQ6WCQ1 1025 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 TMEM57Q8N5G2 664 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
HMGB2-202ENST00000438704 CDCA7Q9BWT1 371 aaPredicted RBP9.68□□□□□ -0.86
HMGB2-202ENST00000438704 MIS18AQ9NYP9 233 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 TNNQ9UQP3 1299 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 NWD2Q9ULI1 1742 aa9.68□□□□□ -0.86
HMGB2-202ENST00000438704 SLIT2O94813 1529 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 PXDNLA1KZ92 1463 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 JCADQ9P266 1359 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 BTBD11A6QL63 1104 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 ELL2O00472 640 aaPredicted RBP9.67□□□□□ -0.86
HMGB2-202ENST00000438704 ZMYND10O75800 440 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 DESI1Q6ICB0 168 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 STK31Q9BXU1 1019 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 THRAP3Q9Y2W1 955 aaKnown RBP9.67□□□□□ -0.86
HMGB2-202ENST00000438704 NRAPQ86VF7 1730 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 SHANK3Q9BYB0 1731 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 LRP6O75581 1613 aa9.67□□□□□ -0.86
HMGB2-202ENST00000438704 UBAP1LF5GYI3 381 aa9.66□□□□□ -0.86
HMGB2-202ENST00000438704 ZBTB7BO15156 539 aaPredicted RBP9.66□□□□□ -0.86
HMGB2-202ENST00000438704 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
HMGB2-202ENST00000438704 SNRPBP14678 240 aaKnown RBP9.66□□□□□ -0.86
HMGB2-202ENST00000438704 GJA5P36382 358 aa9.66□□□□□ -0.86
HMGB2-202ENST00000438704 EVA1CP58658 441 aa9.66□□□□□ -0.86
HMGB2-202ENST00000438704 EVA1BQ9NVM1 165 aa9.66□□□□□ -0.86
HMGB2-202ENST00000438704 BTG4Q9NY30 223 aa9.66□□□□□ -0.86
HMGB2-202ENST00000438704 N4BP2Q86UW6 1770 aaPredicted RBP9.65□□□□□ -0.86
HMGB2-202ENST00000438704 MOXD2PA6NHM9 499 aa9.65□□□□□ -0.86
HMGB2-202ENST00000438704 SH3BP2P78314 561 aa9.65□□□□□ -0.86
HMGB2-202ENST00000438704 MTMR2Q13614 643 aa9.65□□□□□ -0.86
HMGB2-202ENST00000438704 ZNF790Q6PG37 636 aa9.65□□□□□ -0.86
HMGB2-202ENST00000438704 ITPRIPQ8IWB1 547 aa9.65□□□□□ -0.86
HMGB2-202ENST00000438704 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
HMGB2-202ENST00000438704 PCDHB15Q9Y5E8 787 aa9.65□□□□□ -0.86
HMGB2-202ENST00000438704 TNS2Q63HR2 1409 aa9.65□□□□□ -0.87
HMGB2-202ENST00000438704 SPATA31A6Q5VVP1 1343 aa9.64□□□□□ -0.87
HMGB2-202ENST00000438704 WNK3Q9BYP7 1800 aa9.64□□□□□ -0.87
HMGB2-202ENST00000438704 TCERG1O14776 1098 aaKnown RBP9.64□□□□□ -0.87
HMGB2-202ENST00000438704 CCT4P50991 539 aaKnown RBP9.64□□□□□ -0.87
HMGB2-202ENST00000438704 FLIIQ13045 1269 aa9.64□□□□□ -0.87
HMGB2-202ENST00000438704 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
HMGB2-202ENST00000438704 HDGFL1Q5TGJ6 251 aa9.64□□□□□ -0.87
HMGB2-202ENST00000438704 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
HMGB2-202ENST00000438704 RWDD1Q9H446 243 aaPredicted RBP9.64□□□□□ -0.87
HMGB2-202ENST00000438704 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
HMGB2-202ENST00000438704 PAPPAQ13219 1627 aa9.64□□□□□ -0.87
HMGB2-202ENST00000438704 GLI3P10071 1580 aa9.63□□□□□ -0.87
HMGB2-202ENST00000438704 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
HMGB2-202ENST00000438704 SPATA31A1Q5TZJ5 1347 aa9.63□□□□□ -0.87
HMGB2-202ENST00000438704 TERTO14746 1132 aaKnown RBP9.63□□□□□ -0.87
HMGB2-202ENST00000438704 KCNQ3O43525 872 aa9.63□□□□□ -0.87
HMGB2-202ENST00000438704 NDUFV2P19404 249 aa9.63□□□□□ -0.87
HMGB2-202ENST00000438704 INSM1Q01101 510 aaPredicted RBP9.63□□□□□ -0.87
HMGB2-202ENST00000438704 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
HMGB2-202ENST00000438704 STRN4Q9NRL3 753 aa9.63□□□□□ -0.87
HMGB2-202ENST00000438704 UBR2Q8IWV8 1755 aa9.63□□□□□ -0.87
HMGB2-202ENST00000438704 SPATA31A5Q5VU36 1347 aa9.62□□□□□ -0.87
HMGB2-202ENST00000438704 SPATA31A7Q8IWB4 1347 aa9.62□□□□□ -0.87
HMGB2-202ENST00000438704 IGHDP01880 384 aa9.62□□□□□ -0.87
HMGB2-202ENST00000438704 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
HMGB2-202ENST00000438704 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
HMGB2-202ENST00000438704 MPNDQ8N594 471 aa9.62□□□□□ -0.87
HMGB2-202ENST00000438704 NFATC2IPQ8NCF5 419 aa9.62□□□□□ -0.87
HMGB2-202ENST00000438704 DBF4Q9UBU7 674 aaPredicted RBP9.62□□□□□ -0.87
HMGB2-202ENST00000438704 ATP10DQ9P241 1426 aa9.62□□□□□ -0.87
HMGB2-202ENST00000438704 SNRPA1P09661 255 aaKnown RBP9.61□□□□□ -0.87
HMGB2-202ENST00000438704 CABP4P57796 275 aa9.61□□□□□ -0.87
HMGB2-202ENST00000438704 G2E3Q7L622 706 aa9.61□□□□□ -0.87
HMGB2-202ENST00000438704 FNBP4Q8N3X1 1017 aaPredicted RBP9.61□□□□□ -0.87
HMGB2-202ENST00000438704 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
HMGB2-202ENST00000438704 FMNL2Q96PY5 1086 aa9.61□□□□□ -0.87
HMGB2-202ENST00000438704 DDX21Q9NR30 783 aaKnown RBP eCLIP9.61□□□□□ -0.87
HMGB2-202ENST00000438704 HYPKQ9NX55 129 aa9.61□□□□□ -0.87
HMGB2-202ENST00000438704 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.6□□□□□ -0.87
HMGB2-202ENST00000438704 CAPN5O15484 640 aaPredicted RBP9.6□□□□□ -0.87
HMGB2-202ENST00000438704 PIP4K2BP78356 416 aa9.6□□□□□ -0.87
HMGB2-202ENST00000438704 RPAP2Q8IXW5 612 aaPredicted RBP9.6□□□□□ -0.87
HMGB2-202ENST00000438704 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
HMGB2-202ENST00000438704 ZNF496Q96IT1 587 aaPredicted RBP9.6□□□□□ -0.87
HMGB2-202ENST00000438704 BEGAINQ9BUH8 593 aa9.6□□□□□ -0.87
HMGB2-202ENST00000438704 STK17AQ9UEE5 414 aa9.6□□□□□ -0.87
HMGB2-202ENST00000438704 KCPQ6ZWJ8 1503 aa9.6□□□□□ -0.87
HMGB2-202ENST00000438704 BCL9LQ86UU0 1499 aa9.59□□□□□ -0.87
HMGB2-202ENST00000438704 VARSP26640 1264 aaKnown RBP9.59□□□□□ -0.87
HMGB2-202ENST00000438704 VPS72Q15906 364 aa9.59□□□□□ -0.87
HMGB2-202ENST00000438704 LRP10Q7Z4F1 713 aa9.59□□□□□ -0.87
HMGB2-202ENST00000438704 UNC5CLQ8IV45 518 aa9.59□□□□□ -0.87
HMGB2-202ENST00000438704 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
HMGB2-202ENST00000438704 CHPF2Q9P2E5 772 aa9.59□□□□□ -0.87
HMGB2-202ENST00000438704 LAMB4A4D0S4 1761 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms