RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 MOB2Q70IA6 237 aa11.41□□□□□ -0.58
SCRN1-208ENST00000438497 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
SCRN1-208ENST00000438497 LAMB4A4D0S4 1761 aa11.41□□□□□ -0.58
SCRN1-208ENST00000438497 SH3TC1Q8TE82 1336 aa11.4□□□□□ -0.58
SCRN1-208ENST00000438497 FXR1P51114 621 aaKnown RBP eCLIP11.4□□□□□ -0.58
SCRN1-208ENST00000438497 GPSM2P81274 684 aa11.4□□□□□ -0.58
SCRN1-208ENST00000438497 AIMP1Q12904 312 aaKnown RBP11.4□□□□□ -0.58
SCRN1-208ENST00000438497 TCIRG1Q13488 830 aa11.4□□□□□ -0.58
SCRN1-208ENST00000438497 PDIA6Q15084 440 aa11.4□□□□□ -0.58
SCRN1-208ENST00000438497 COPS6Q7L5N1 327 aa11.4□□□□□ -0.58
SCRN1-208ENST00000438497 CELF1Q92879 486 aaKnown RBP11.4□□□□□ -0.58
SCRN1-208ENST00000438497 LAMB2P55268 1798 aa11.4□□□□□ -0.58
SCRN1-208ENST00000438497 RTL9Q8NET4 1388 aa11.4□□□□□ -0.59
SCRN1-208ENST00000438497 CLSPNQ9HAW4 1339 aa11.39□□□□□ -0.59
SCRN1-208ENST00000438497 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
SCRN1-208ENST00000438497 ANXA1P04083 346 aa11.39□□□□□ -0.59
SCRN1-208ENST00000438497 MKRN3Q13064 507 aaKnown RBP11.39□□□□□ -0.59
SCRN1-208ENST00000438497 PRAMEF18Q5VWM3 479 aa11.39□□□□□ -0.59
SCRN1-208ENST00000438497 AGBL3Q8NEM8 1001 aa11.39□□□□□ -0.59
SCRN1-208ENST00000438497 TBC1D16Q8TBP0 767 aa11.39□□□□□ -0.59
SCRN1-208ENST00000438497 R3HDMLQ9H3Y0 253 aa11.39□□□□□ -0.59
SCRN1-208ENST00000438497 SCAF8Q9UPN6 1271 aaKnown RBP11.39□□□□□ -0.59
SCRN1-208ENST00000438497 ZNF280AP59817 542 aaPredicted RBP11.38□□□□□ -0.59
SCRN1-208ENST00000438497 SREBF2Q12772 1141 aa11.38□□□□□ -0.59
SCRN1-208ENST00000438497 LRP10Q7Z4F1 713 aa11.38□□□□□ -0.59
SCRN1-208ENST00000438497 ZNF428Q96B54 188 aa11.38□□□□□ -0.59
SCRN1-208ENST00000438497 TRIM17Q9Y577 477 aa11.38□□□□□ -0.59
SCRN1-208ENST00000438497 DUOX1Q9NRD9 1551 aa11.37□□□□□ -0.59
SCRN1-208ENST00000438497 USP17L8P0C7I0 530 aa11.37□□□□□ -0.59
SCRN1-208ENST00000438497 NF2P35240 595 aa11.37□□□□□ -0.59
SCRN1-208ENST00000438497 RPS8P62241 208 aaKnown RBP11.37□□□□□ -0.59
SCRN1-208ENST00000438497 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
SCRN1-208ENST00000438497 SF3B3Q15393 1217 aaKnown RBP11.37□□□□□ -0.59
SCRN1-208ENST00000438497 PROSER3Q2NL68 480 aa11.37□□□□□ -0.59
SCRN1-208ENST00000438497 RSBN1LQ6PCB5 846 aaPredicted RBP11.37□□□□□ -0.59
SCRN1-208ENST00000438497 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
SCRN1-208ENST00000438497 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
SCRN1-208ENST00000438497 CFHR5Q9BXR6 569 aa11.37□□□□□ -0.59
SCRN1-208ENST00000438497 MYOZ2Q9NPC6 264 aa11.37□□□□□ -0.59
SCRN1-208ENST00000438497 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
SCRN1-208ENST00000438497 KDM3BQ7LBC6 1761 aa11.36□□□□□ -0.59
SCRN1-208ENST00000438497 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
SCRN1-208ENST00000438497 EN2P19622 333 aaPredicted RBP11.36□□□□□ -0.59
SCRN1-208ENST00000438497 PTPN12Q05209 780 aaKnown RBP11.36□□□□□ -0.59
SCRN1-208ENST00000438497 FAM89AQ96GI7 184 aa11.36□□□□□ -0.59
SCRN1-208ENST00000438497 ANKIB1Q9P2G1 1089 aa11.36□□□□□ -0.59
SCRN1-208ENST00000438497 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
SCRN1-208ENST00000438497 PPP2R1AP30153 589 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 INHBEP58166 350 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 PRKG1Q13976 671 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 OTOP1Q7RTM1 612 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 GMLQ99445 158 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 TSPYL4Q9UJ04 414 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 PAPPA2Q9BXP8 1791 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 DLG5Q8TDM6 1919 aa11.35□□□□□ -0.59
SCRN1-208ENST00000438497 SCN9AQ15858 1988 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 UFL1O94874 794 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 NFE2L2Q16236 605 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
SCRN1-208ENST00000438497 ARMC9Q7Z3E5 817 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 PODXL2Q9NZ53 605 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.34□□□□□ -0.59
SCRN1-208ENST00000438497 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 PTPN22Q9Y2R2 807 aa11.34□□□□□ -0.59
SCRN1-208ENST00000438497 LRRC37AA6NMS7 1700 aa11.33□□□□□ -0.6
SCRN1-208ENST00000438497 USP17L3A6NCW0 530 aa11.33□□□□□ -0.6
SCRN1-208ENST00000438497 USP17L4A6NCW7 530 aa11.33□□□□□ -0.6
SCRN1-208ENST00000438497 DLL1O00548 723 aa11.33□□□□□ -0.6
SCRN1-208ENST00000438497 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
SCRN1-208ENST00000438497 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
SCRN1-208ENST00000438497 SLC10A4Q96EP9 437 aa11.33□□□□□ -0.6
SCRN1-208ENST00000438497 KIAA0100Q14667 2235 aaKnown RBP11.32□□□□□ -0.6
SCRN1-208ENST00000438497 MANSC4A6NHS7 340 aaPredicted RBP11.32□□□□□ -0.6
SCRN1-208ENST00000438497 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
SCRN1-208ENST00000438497 IRS4O14654 1257 aaPredicted RBP11.32□□□□□ -0.6
SCRN1-208ENST00000438497 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
SCRN1-208ENST00000438497 PODNQ7Z5L7 613 aa11.32□□□□□ -0.6
SCRN1-208ENST00000438497 OGFOD1Q8N543 542 aa11.32□□□□□ -0.6
SCRN1-208ENST00000438497 ERO1AQ96HE7 468 aa11.32□□□□□ -0.6
SCRN1-208ENST00000438497 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
SCRN1-208ENST00000438497 LDLRAD1Q5T700 205 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 SLC17A8Q8NDX2 589 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 PLBD2Q8NHP8 589 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 PLEKHF1Q96S99 279 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 ISCA1Q9BUE6 129 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 PNNQ9H307 717 aaKnown RBP11.31□□□□□ -0.6
SCRN1-208ENST00000438497 EFCC1Q9HA90 598 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 SEC31BQ9NQW1 1179 aa11.31□□□□□ -0.6
SCRN1-208ENST00000438497 ANGEL1Q9UNK9 670 aaKnown RBP11.31□□□□□ -0.6
SCRN1-208ENST00000438497 WNT10BO00744 389 aa11.3□□□□□ -0.6
SCRN1-208ENST00000438497 CD99L2Q8TCZ2 262 aa11.3□□□□□ -0.6
SCRN1-208ENST00000438497 ARMC5Q96C12 935 aa11.3□□□□□ -0.6
SCRN1-208ENST00000438497 BABAM1Q9NWV8 329 aa11.3□□□□□ -0.6
SCRN1-208ENST00000438497 OTUD7BQ6GQQ9 843 aa11.29□□□□□ -0.6
SCRN1-208ENST00000438497 NBPF11Q86T75 865 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms