RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 GCC1Q96CN9 775 aa12.09□□□□□ -0.47
CUBN-204ENST00000438254 SETDB2Q96T68 719 aa12.09□□□□□ -0.47
CUBN-204ENST00000438254 LRP5O75197 1615 aa12.08□□□□□ -0.48
CUBN-204ENST00000438254 RTL9Q8NET4 1388 aa12.08□□□□□ -0.48
CUBN-204ENST00000438254 CASZ1Q86V15 1759 aa12.08□□□□□ -0.48
CUBN-204ENST00000438254 POLRMTO00411 1230 aaKnown RBP12.08□□□□□ -0.48
CUBN-204ENST00000438254 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
CUBN-204ENST00000438254 LMBR1LQ6UX01 489 aa12.08□□□□□ -0.48
CUBN-204ENST00000438254 BICDL1Q6ZP65 573 aa12.08□□□□□ -0.48
CUBN-204ENST00000438254 TTLL11Q8NHH1 800 aa12.08□□□□□ -0.48
CUBN-204ENST00000438254 TNRC6CQ9HCJ0 1690 aaKnown RBP12.07□□□□□ -0.48
CUBN-204ENST00000438254 CTSWP56202 376 aa12.07□□□□□ -0.48
CUBN-204ENST00000438254 NUCB1Q02818 461 aa12.07□□□□□ -0.48
CUBN-204ENST00000438254 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
CUBN-204ENST00000438254 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
CUBN-204ENST00000438254 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
CUBN-204ENST00000438254 PDGFDQ9GZP0 370 aaPredicted RBP12.07□□□□□ -0.48
CUBN-204ENST00000438254 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
CUBN-204ENST00000438254 COPRSQ9NQ92 184 aa12.07□□□□□ -0.48
CUBN-204ENST00000438254 HCLS1P14317 486 aaPredicted RBP12.06□□□□□ -0.48
CUBN-204ENST00000438254 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
CUBN-204ENST00000438254 PRR5LQ6MZQ0 368 aa12.06□□□□□ -0.48
CUBN-204ENST00000438254 TPTE2Q6XPS3 522 aa12.06□□□□□ -0.48
CUBN-204ENST00000438254 NBPF5PQ86XG9 351 aaPredicted RBP12.06□□□□□ -0.48
CUBN-204ENST00000438254 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
CUBN-204ENST00000438254 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
CUBN-204ENST00000438254 COL4A1P02462 1669 aa12.06□□□□□ -0.48
CUBN-204ENST00000438254 FAM177BA6PVY3 158 aa12.05□□□□□ -0.48
CUBN-204ENST00000438254 SERPINB2P05120 415 aa12.05□□□□□ -0.48
CUBN-204ENST00000438254 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
CUBN-204ENST00000438254 GREM2Q9H772 168 aa12.05□□□□□ -0.48
CUBN-204ENST00000438254 PA2G4Q9UQ80 394 aaKnown RBP12.05□□□□□ -0.48
CUBN-204ENST00000438254 EXOC6BQ9Y2D4 811 aa12.05□□□□□ -0.48
CUBN-204ENST00000438254 KLRG2A4D1S0 409 aaPredicted RBP12.04□□□□□ -0.48
CUBN-204ENST00000438254 G3V3G9 751 aa12.04□□□□□ -0.48
CUBN-204ENST00000438254 HSP90B1P14625 803 aaKnown RBP12.04□□□□□ -0.48
CUBN-204ENST00000438254 PDE4AP27815 886 aa12.04□□□□□ -0.48
CUBN-204ENST00000438254 SKAP1Q86WV1 359 aa12.04□□□□□ -0.48
CUBN-204ENST00000438254 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
CUBN-204ENST00000438254 SLC16A10Q8TF71 515 aa12.04□□□□□ -0.48
CUBN-204ENST00000438254 ANKRD31Q8N7Z5 1873 aa12.04□□□□□ -0.48
CUBN-204ENST00000438254 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 SURF6O75683 361 aaKnown RBP12.03□□□□□ -0.48
CUBN-204ENST00000438254 SASH1O94885 1247 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 MMP10P09238 476 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 ATG9AQ7Z3C6 839 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 CHD1LQ86WJ1 897 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 CNBD1Q8NA66 436 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
CUBN-204ENST00000438254 SALL3Q9BXA9 1300 aa12.03□□□□□ -0.48
CUBN-204ENST00000438254 CIAO1O76071 339 aa12.02□□□□□ -0.49
CUBN-204ENST00000438254 ITGA6P23229 1130 aa12.02□□□□□ -0.49
CUBN-204ENST00000438254 CRY2Q49AN0 593 aa12.02□□□□□ -0.49
CUBN-204ENST00000438254 HSP90AB4PQ58FF6 505 aa12.02□□□□□ -0.49
CUBN-204ENST00000438254 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
CUBN-204ENST00000438254 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
CUBN-204ENST00000438254 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
CUBN-204ENST00000438254 BOLA1Q9Y3E2 137 aa12.02□□□□□ -0.49
CUBN-204ENST00000438254 IFIT5Q13325 482 aaKnown RBP12.01□□□□□ -0.49
CUBN-204ENST00000438254 CCDC57Q2TAC2 916 aa12.01□□□□□ -0.49
CUBN-204ENST00000438254 CCDC152Q4G0S7 254 aa12.01□□□□□ -0.49
CUBN-204ENST00000438254 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
CUBN-204ENST00000438254 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
CUBN-204ENST00000438254 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
CUBN-204ENST00000438254 RHPN1Q8TCX5 695 aa12.01□□□□□ -0.49
CUBN-204ENST00000438254 KIF1BPQ96EK5 621 aa12.01□□□□□ -0.49
CUBN-204ENST00000438254 ZNF594Q96JF6 807 aaPredicted RBP12.01□□□□□ -0.49
CUBN-204ENST00000438254 LRRCC1Q9C099 1032 aa12.01□□□□□ -0.49
CUBN-204ENST00000438254 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
CUBN-204ENST00000438254 POTEB3A0JP26 581 aa12□□□□□ -0.49
CUBN-204ENST00000438254 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
CUBN-204ENST00000438254 EYA2O00167 538 aa12□□□□□ -0.49
CUBN-204ENST00000438254 SMARCA5O60264 1052 aaPredicted RBP12□□□□□ -0.49
CUBN-204ENST00000438254 GTF2E1P29083 439 aaPredicted RBP12□□□□□ -0.49
CUBN-204ENST00000438254 LRRC24Q50LG9 513 aa12□□□□□ -0.49
CUBN-204ENST00000438254 DPY19L2Q6NUT2 758 aa12□□□□□ -0.49
CUBN-204ENST00000438254 POTEBQ6S5H4 581 aa12□□□□□ -0.49
CUBN-204ENST00000438254 NLRP3Q96P20 1036 aa12□□□□□ -0.49
CUBN-204ENST00000438254 CCDC85AQ96PX6 553 aaPredicted RBP12□□□□□ -0.49
CUBN-204ENST00000438254 PUS3Q9BZE2 481 aaKnown RBP12□□□□□ -0.49
CUBN-204ENST00000438254 LNPKQ9C0E8 428 aa12□□□□□ -0.49
CUBN-204ENST00000438254 SEC31BQ9NQW1 1179 aa12□□□□□ -0.49
CUBN-204ENST00000438254 CHMP3Q9Y3E7 222 aa12□□□□□ -0.49
CUBN-204ENST00000438254 RIPOR2Q9Y4F9 1068 aa12□□□□□ -0.49
CUBN-204ENST00000438254 IL15P40933 162 aaPredicted RBP11.99□□□□□ -0.49
CUBN-204ENST00000438254 ST5P78524 1137 aa11.99□□□□□ -0.49
CUBN-204ENST00000438254 ERC1Q8IUD2 1116 aa11.99□□□□□ -0.49
CUBN-204ENST00000438254 BRIP1Q9BX63 1249 aa11.99□□□□□ -0.49
CUBN-204ENST00000438254 SIL1Q9H173 461 aa11.99□□□□□ -0.49
CUBN-204ENST00000438254 C10orf71Q711Q0 1435 aa11.99□□□□□ -0.49
CUBN-204ENST00000438254 COL11A2P13942 1736 aaPredicted RBP11.99□□□□□ -0.49
CUBN-204ENST00000438254 A0A1B0GUL6 1792 aa11.99□□□□□ -0.49
CUBN-204ENST00000438254 TAF1P21675 1872 aa11.98□□□□□ -0.49
CUBN-204ENST00000438254 KIF13BQ9NQT8 1826 aa11.98□□□□□ -0.49
CUBN-204ENST00000438254 HOXA10P31260 410 aaPredicted RBP11.98□□□□□ -0.49
CUBN-204ENST00000438254 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
CUBN-204ENST00000438254 C16orf71Q8IYS4 520 aaPredicted RBP11.98□□□□□ -0.49
CUBN-204ENST00000438254 VGLL2Q8N8G2 317 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms