RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CCDC85AQ96PX6 553 aaPredicted RBP18.53■□□□□ 0.56
SGCE-205ENST00000437425 SETDB2Q96T68 719 aa18.53■□□□□ 0.56
SGCE-205ENST00000437425 CDC5LQ99459 802 aaKnown RBP18.53■□□□□ 0.56
SGCE-205ENST00000437425 MPHOSPH8Q99549 860 aa18.53■□□□□ 0.56
SGCE-205ENST00000437425 PAG1Q9NWQ8 432 aa18.53■□□□□ 0.56
SGCE-205ENST00000437425 CHMP5Q9NZZ3 219 aa18.53■□□□□ 0.56
SGCE-205ENST00000437425 C4BP0C0L5 1744 aa18.52■□□□□ 0.56
SGCE-205ENST00000437425 HCLS1P14317 486 aaPredicted RBP18.52■□□□□ 0.56
SGCE-205ENST00000437425 NMIQ13287 307 aaPredicted RBP18.52■□□□□ 0.56
SGCE-205ENST00000437425 SF3B3Q15393 1217 aaKnown RBP18.52■□□□□ 0.56
SGCE-205ENST00000437425 TRAPPC3LQ5T215 181 aa18.52■□□□□ 0.56
SGCE-205ENST00000437425 DNAJC2Q99543 621 aaKnown RBP18.52■□□□□ 0.56
SGCE-205ENST00000437425 DDX60Q8IY21 1712 aaKnown RBP18.51■□□□□ 0.55
SGCE-205ENST00000437425 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
SGCE-205ENST00000437425 PUM3Q15397 648 aaKnown RBP18.51■□□□□ 0.55
SGCE-205ENST00000437425 FAM182BQ5T319 152 aa18.51■□□□□ 0.55
SGCE-205ENST00000437425 RNF20Q5VTR2 975 aa18.51■□□□□ 0.55
SGCE-205ENST00000437425 VGLL2Q8N8G2 317 aa18.51■□□□□ 0.55
SGCE-205ENST00000437425 MED23Q9ULK4 1368 aa18.51■□□□□ 0.55
SGCE-205ENST00000437425 ZFYP08048 801 aaPredicted RBP18.5■□□□□ 0.55
SGCE-205ENST00000437425 ZKSCAN1P17029 563 aaPredicted RBP18.5■□□□□ 0.55
SGCE-205ENST00000437425 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
SGCE-205ENST00000437425 TPTE2Q6XPS3 522 aa18.5■□□□□ 0.55
SGCE-205ENST00000437425 LPIN2Q92539 896 aa18.5■□□□□ 0.55
SGCE-205ENST00000437425 KCNB2Q92953 911 aa18.5■□□□□ 0.55
SGCE-205ENST00000437425 SLKQ9H2G2 1235 aaPredicted RBP18.5■□□□□ 0.55
SGCE-205ENST00000437425 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
SGCE-205ENST00000437425 UQCRFS1P1P0C7P4 283 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 GTF2E1P29083 439 aaPredicted RBP18.49■□□□□ 0.55
SGCE-205ENST00000437425 RFC4P35249 363 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 MAP4K1Q92918 833 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 IL25Q9H293 177 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 COL24A1Q17RW2 1714 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 NEK4P51957 841 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 TTF1Q15361 905 aaPredicted RBP18.49■□□□□ 0.55
SGCE-205ENST00000437425 MCMDC2Q4G0Z9 681 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 ARHGEF1Q92888 912 aaKnown RBP18.49■□□□□ 0.55
SGCE-205ENST00000437425 TM6SF1Q9BZW5 370 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 BCL2L12Q9HB09 334 aa18.49■□□□□ 0.55
SGCE-205ENST00000437425 SLC5A1P13866 664 aa18.48■□□□□ 0.55
SGCE-205ENST00000437425 SSFA2P28290 1259 aa18.48■□□□□ 0.55
SGCE-205ENST00000437425 KCNQ4P56696 695 aa18.48■□□□□ 0.55
SGCE-205ENST00000437425 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
SGCE-205ENST00000437425 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
SGCE-205ENST00000437425 CWC22Q9HCG8 908 aaKnown RBP18.48■□□□□ 0.55
SGCE-205ENST00000437425 GOLIM4O00461 696 aa18.47■□□□□ 0.55
SGCE-205ENST00000437425 KCNJ4P48050 445 aa18.47■□□□□ 0.55
SGCE-205ENST00000437425 NECTIN1Q15223 517 aa18.47■□□□□ 0.55
SGCE-205ENST00000437425 ZSCAN25Q6NSZ9 544 aa18.47■□□□□ 0.55
SGCE-205ENST00000437425 DDX46Q7L014 1031 aaKnown RBP18.47■□□□□ 0.55
SGCE-205ENST00000437425 NBPF5PQ86XG9 351 aaPredicted RBP18.47■□□□□ 0.55
SGCE-205ENST00000437425 SNX14Q9Y5W7 946 aa18.47■□□□□ 0.55
SGCE-205ENST00000437425 A0A0D9SFI3 127 aa18.46■□□□□ 0.55
SGCE-205ENST00000437425 CD2BP2O95400 341 aaKnown RBP18.46■□□□□ 0.55
SGCE-205ENST00000437425 FGFR2P21802 821 aa18.46■□□□□ 0.55
SGCE-205ENST00000437425 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
SGCE-205ENST00000437425 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
SGCE-205ENST00000437425 NLRP3Q96P20 1036 aa18.46■□□□□ 0.55
SGCE-205ENST00000437425 PALD1Q9ULE6 856 aa18.46■□□□□ 0.55
SGCE-205ENST00000437425 RNF113AO15541 343 aaKnown RBP18.45■□□□□ 0.54
SGCE-205ENST00000437425 PSMA5P28066 241 aa18.45■□□□□ 0.54
SGCE-205ENST00000437425 DDIT3P35638 169 aa18.45■□□□□ 0.54
SGCE-205ENST00000437425 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.45■□□□□ 0.54
SGCE-205ENST00000437425 U3KPZ7 1027 aaPredicted RBP18.45■□□□□ 0.54
SGCE-205ENST00000437425 CARMIL3Q8ND23 1372 aa18.45■□□□□ 0.54
SGCE-205ENST00000437425 ARAP2Q8WZ64 1704 aa18.45■□□□□ 0.54
SGCE-205ENST00000437425 BRWD3Q6RI45 1802 aa18.45■□□□□ 0.54
SGCE-205ENST00000437425 ARID4AP29374 1257 aaPredicted RBP18.44■□□□□ 0.54
SGCE-205ENST00000437425 PTH1RQ03431 593 aa18.44■□□□□ 0.54
SGCE-205ENST00000437425 KRT32Q14532 448 aa18.44■□□□□ 0.54
SGCE-205ENST00000437425 TSGA10IPQ3SY00 556 aa18.44■□□□□ 0.54
SGCE-205ENST00000437425 BSDC1Q9NW68 430 aaPredicted RBP18.44■□□□□ 0.54
SGCE-205ENST00000437425 RBM8AQ9Y5S9 174 aaKnown RBP18.44■□□□□ 0.54
SGCE-205ENST00000437425 TAF5LO75529 589 aa18.44■□□□□ 0.54
SGCE-205ENST00000437425 ADORA1P30542 326 aa18.44■□□□□ 0.54
SGCE-205ENST00000437425 FKBP4Q02790 459 aaKnown RBP eCLIP18.44■□□□□ 0.54
SGCE-205ENST00000437425 NFKBIBQ15653 356 aa18.44■□□□□ 0.54
SGCE-205ENST00000437425 ZMYM1Q5SVZ6 1142 aa18.44■□□□□ 0.54
SGCE-205ENST00000437425 EDC3Q96F86 508 aaKnown RBP18.44■□□□□ 0.54
SGCE-205ENST00000437425 PLSCR1O15162 318 aa18.43■□□□□ 0.54
SGCE-205ENST00000437425 RXRBP28702 533 aa18.43■□□□□ 0.54
SGCE-205ENST00000437425 BICDL1Q6ZP65 573 aa18.43■□□□□ 0.54
SGCE-205ENST00000437425 DSCC1Q9BVC3 393 aa18.43■□□□□ 0.54
SGCE-205ENST00000437425 SEC31BQ9NQW1 1179 aa18.43■□□□□ 0.54
SGCE-205ENST00000437425 LRRC4BQ9NT99 713 aa18.43■□□□□ 0.54
SGCE-205ENST00000437425 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
SGCE-205ENST00000437425 C4AP0C0L4 1744 aa18.42■□□□□ 0.54
SGCE-205ENST00000437425 TRIM37O94972 964 aa18.42■□□□□ 0.54
SGCE-205ENST00000437425 NBR1Q14596 966 aa18.42■□□□□ 0.54
SGCE-205ENST00000437425 CREB3L3Q68CJ9 461 aa18.42■□□□□ 0.54
SGCE-205ENST00000437425 CCDC102BQ68D86 513 aa18.42■□□□□ 0.54
SGCE-205ENST00000437425 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
SGCE-205ENST00000437425 INTS4Q96HW7 963 aaKnown RBP18.42■□□□□ 0.54
SGCE-205ENST00000437425 UBE4AQ14139 1066 aa18.41■□□□□ 0.54
SGCE-205ENST00000437425 VPS53Q5VIR6 699 aa18.41■□□□□ 0.54
SGCE-205ENST00000437425 SPRYD3Q8NCJ5 442 aa18.41■□□□□ 0.54
SGCE-205ENST00000437425 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
SGCE-205ENST00000437425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms