RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 TMC4Q7Z404 712 aa21.71■■□□□ 1.07
HMGN1P19-201ENST00000436976 NLRP10Q86W26 655 aa21.71■■□□□ 1.07
HMGN1P19-201ENST00000436976 SCAF8Q9UPN6 1271 aaKnown RBP21.71■■□□□ 1.07
HMGN1P19-201ENST00000436976 COL6A3P12111 3177 aa21.71■■□□□ 1.07
HMGN1P19-201ENST00000436976 FKTNO75072 461 aa21.7■■□□□ 1.06
HMGN1P19-201ENST00000436976 VIL1P09327 827 aaKnown RBP21.7■■□□□ 1.06
HMGN1P19-201ENST00000436976 U2AF1L5P0DN76 240 aaPredicted RBP21.7■■□□□ 1.06
HMGN1P19-201ENST00000436976 U2AF1Q01081 240 aaKnown RBP eCLIP21.7■■□□□ 1.06
HMGN1P19-201ENST00000436976 SCARF1Q14162 830 aa21.7■■□□□ 1.06
HMGN1P19-201ENST00000436976 CFHR5Q9BXR6 569 aa21.7■■□□□ 1.06
HMGN1P19-201ENST00000436976 ZNF646O15015 1829 aaPredicted RBP21.7■■□□□ 1.06
HMGN1P19-201ENST00000436976 ERBB4Q15303 1308 aa21.7■■□□□ 1.06
HMGN1P19-201ENST00000436976 GPSM2P81274 684 aa21.69■■□□□ 1.06
HMGN1P19-201ENST00000436976 PROSER3Q2NL68 480 aa21.69■■□□□ 1.06
HMGN1P19-201ENST00000436976 CELF1Q92879 486 aaKnown RBP21.69■■□□□ 1.06
HMGN1P19-201ENST00000436976 ZNF609O15014 1411 aa21.69■■□□□ 1.06
HMGN1P19-201ENST00000436976 A0A0C4DFX4 3053 aa21.69■■□□□ 1.06
HMGN1P19-201ENST00000436976 C6orf229H3BNL8 230 aa21.68■■□□□ 1.06
HMGN1P19-201ENST00000436976 ANXA1P04083 346 aa21.68■■□□□ 1.06
HMGN1P19-201ENST00000436976 ZNF280AP59817 542 aaPredicted RBP21.68■■□□□ 1.06
HMGN1P19-201ENST00000436976 MKRN3Q13064 507 aaKnown RBP21.68■■□□□ 1.06
HMGN1P19-201ENST00000436976 PNISRQ8TF01 805 aaKnown RBP21.68■■□□□ 1.06
HMGN1P19-201ENST00000436976 COLQQ9Y215 455 aaPredicted RBP21.68■■□□□ 1.06
HMGN1P19-201ENST00000436976 PRAMEF18Q5VWM3 479 aa21.67■■□□□ 1.06
HMGN1P19-201ENST00000436976 ZNF428Q96B54 188 aa21.67■■□□□ 1.06
HMGN1P19-201ENST00000436976 SH3TC1Q8TE82 1336 aa21.66■■□□□ 1.06
HMGN1P19-201ENST00000436976 CFAP53Q96M91 514 aa21.66■■□□□ 1.06
HMGN1P19-201ENST00000436976 TRMT112Q9UI30 125 aaKnown RBP21.66■■□□□ 1.06
HMGN1P19-201ENST00000436976 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
HMGN1P19-201ENST00000436976 PITPNM2Q9BZ72 1349 aa21.65■■□□□ 1.06
HMGN1P19-201ENST00000436976 INTS3Q68E01 1043 aaKnown RBP21.65■■□□□ 1.06
HMGN1P19-201ENST00000436976 TBC1D16Q8TBP0 767 aa21.65■■□□□ 1.06
HMGN1P19-201ENST00000436976 OTOP1Q7RTM1 612 aa21.64■■□□□ 1.05
HMGN1P19-201ENST00000436976 TRIM17Q9Y577 477 aa21.64■■□□□ 1.05
HMGN1P19-201ENST00000436976 EN2P19622 333 aaPredicted RBP21.63■■□□□ 1.05
HMGN1P19-201ENST00000436976 EYA3Q99504 573 aa21.63■■□□□ 1.05
HMGN1P19-201ENST00000436976 SREBF2Q12772 1141 aa21.62■■□□□ 1.05
HMGN1P19-201ENST00000436976 RSBN1LQ6PCB5 846 aaPredicted RBP21.62■■□□□ 1.05
HMGN1P19-201ENST00000436976 AGBL3Q8NEM8 1001 aa21.62■■□□□ 1.05
HMGN1P19-201ENST00000436976 GMLQ99445 158 aa21.62■■□□□ 1.05
HMGN1P19-201ENST00000436976 MYOZ2Q9NPC6 264 aa21.62■■□□□ 1.05
HMGN1P19-201ENST00000436976 CUL9Q8IWT3 2517 aa21.62■■□□□ 1.05
HMGN1P19-201ENST00000436976 TCIRG1Q13488 830 aa21.61■■□□□ 1.05
HMGN1P19-201ENST00000436976 HSP90AB3PQ58FF7 597 aa21.61■■□□□ 1.05
HMGN1P19-201ENST00000436976 EIF2S2P20042 333 aaKnown RBP21.6■■□□□ 1.05
HMGN1P19-201ENST00000436976 TTLL12Q14166 644 aaPredicted RBP21.6■■□□□ 1.05
HMGN1P19-201ENST00000436976 SF3B3Q15393 1217 aaKnown RBP21.6■■□□□ 1.05
HMGN1P19-201ENST00000436976 COPS6Q7L5N1 327 aa21.6■■□□□ 1.05
HMGN1P19-201ENST00000436976 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
HMGN1P19-201ENST00000436976 PTPN12Q05209 780 aaKnown RBP21.59■■□□□ 1.05
HMGN1P19-201ENST00000436976 AIMP1Q12904 312 aaKnown RBP21.59■■□□□ 1.05
HMGN1P19-201ENST00000436976 ZC3H12CQ9C0D7 883 aaKnown RBP21.59■■□□□ 1.05
HMGN1P19-201ENST00000436976 DLL1O00548 723 aa21.58■■□□□ 1.05
HMGN1P19-201ENST00000436976 USP17L8P0C7I0 530 aa21.58■■□□□ 1.05
HMGN1P19-201ENST00000436976 NBPF9Q3BBW0 867 aa21.58■■□□□ 1.05
HMGN1P19-201ENST00000436976 XAGE3Q8WTP9 111 aa21.58■■□□□ 1.05
HMGN1P19-201ENST00000436976 PTPN22Q9Y2R2 807 aa21.58■■□□□ 1.05
HMGN1P19-201ENST00000436976 ARMC5Q96C12 935 aa21.57■■□□□ 1.04
HMGN1P19-201ENST00000436976 PODXL2Q9NZ53 605 aa21.57■■□□□ 1.04
HMGN1P19-201ENST00000436976 LAMA3Q16787 3333 aa21.57■■□□□ 1.04
HMGN1P19-201ENST00000436976 CAP1Q01518 475 aa21.56■■□□□ 1.04
HMGN1P19-201ENST00000436976 SPRYD7Q5W111 196 aa21.56■■□□□ 1.04
HMGN1P19-201ENST00000436976 OTUD5Q96G74 571 aa21.56■■□□□ 1.04
HMGN1P19-201ENST00000436976 FAM89AQ96GI7 184 aa21.56■■□□□ 1.04
HMGN1P19-201ENST00000436976 NECTIN2Q92692 538 aa21.55■■□□□ 1.04
HMGN1P19-201ENST00000436976 UFL1O94874 794 aa21.54■■□□□ 1.04
HMGN1P19-201ENST00000436976 ALDH1A1P00352 501 aa21.54■■□□□ 1.04
HMGN1P19-201ENST00000436976 RPS8P62241 208 aaKnown RBP21.54■■□□□ 1.04
HMGN1P19-201ENST00000436976 SPEF2Q9C093 1822 aa21.54■■□□□ 1.04
HMGN1P19-201ENST00000436976 G3V3G9 751 aa21.53■■□□□ 1.04
HMGN1P19-201ENST00000436976 PPP2R1AP30153 589 aa21.53■■□□□ 1.04
HMGN1P19-201ENST00000436976 PRKG1Q13976 671 aa21.53■■□□□ 1.04
HMGN1P19-201ENST00000436976 LDLRAD1Q5T700 205 aa21.53■■□□□ 1.04
HMGN1P19-201ENST00000436976 DCAF8Q5TAQ9 597 aa21.53■■□□□ 1.04
HMGN1P19-201ENST00000436976 IFNL1Q8IU54 200 aa21.53■■□□□ 1.04
HMGN1P19-201ENST00000436976 ECM29Q5VYK3 1845 aa21.52■■□□□ 1.04
HMGN1P19-201ENST00000436976 IGF2BP3O00425 579 aaKnown RBP eCLIP21.52■■□□□ 1.04
HMGN1P19-201ENST00000436976 CD99L2Q8TCZ2 262 aa21.52■■□□□ 1.04
HMGN1P19-201ENST00000436976 TSPYL4Q9UJ04 414 aa21.52■■□□□ 1.04
HMGN1P19-201ENST00000436976 FZD1Q9UP38 647 aa21.52■■□□□ 1.04
HMGN1P19-201ENST00000436976 H0YGN5 161 aa21.51■■□□□ 1.03
HMGN1P19-201ENST00000436976 WNT10BO00744 389 aa21.51■■□□□ 1.03
HMGN1P19-201ENST00000436976 RTL5Q5HYW3 569 aaPredicted RBP21.51■■□□□ 1.03
HMGN1P19-201ENST00000436976 PLEKHF1Q96S99 279 aa21.51■■□□□ 1.03
HMGN1P19-201ENST00000436976 ISCA1Q9BUE6 129 aa21.51■■□□□ 1.03
HMGN1P19-201ENST00000436976 SEC31BQ9NQW1 1179 aa21.51■■□□□ 1.03
HMGN1P19-201ENST00000436976 GGA1Q9UJY5 639 aa21.51■■□□□ 1.03
HMGN1P19-201ENST00000436976 USP17L3A6NCW0 530 aa21.5■■□□□ 1.03
HMGN1P19-201ENST00000436976 USP17L4A6NCW7 530 aa21.5■■□□□ 1.03
HMGN1P19-201ENST00000436976 NF2P35240 595 aa21.5■■□□□ 1.03
HMGN1P19-201ENST00000436976 NFE2L2Q16236 605 aa21.5■■□□□ 1.03
HMGN1P19-201ENST00000436976 USP17L1Q7RTZ2 530 aa21.5■■□□□ 1.03
HMGN1P19-201ENST00000436976 ARMC9Q7Z3E5 817 aa21.5■■□□□ 1.03
HMGN1P19-201ENST00000436976 MXD3Q9BW11 206 aa21.5■■□□□ 1.03
HMGN1P19-201ENST00000436976 ANKIB1Q9P2G1 1089 aa21.5■■□□□ 1.03
HMGN1P19-201ENST00000436976 ERO1AQ96HE7 468 aa21.49■■□□□ 1.03
HMGN1P19-201ENST00000436976 ZNF333Q96JL9 665 aa21.49■■□□□ 1.03
HMGN1P19-201ENST00000436976 ZSWIM8A7E2V4 1837 aa21.49■■□□□ 1.03
HMGN1P19-201ENST00000436976 OTOFQ9HC10 1997 aa21.48■■□□□ 1.03
HMGN1P19-201ENST00000436976 MANSC4A6NHS7 340 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms