RNA–Protein interactions for RNA: ENST00000435954.2

CLNS1AP1-201, Transcript of chloride nucleotide-sensitive channel 1A pseudogene 1, humanhuman

BASIC

Gene CLNS1AP1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP1-201ENST00000435954 CICQ96RK0 1608 aaPredicted RBP9.78□□□□□ -0.84
CLNS1AP1-201ENST00000435954 TUBGCP6Q96RT7 1819 aa9.77□□□□□ -0.84
CLNS1AP1-201ENST00000435954 SLIT3O75094 1523 aa9.77□□□□□ -0.84
CLNS1AP1-201ENST00000435954 PLEKHG2Q9H7P9 1386 aa9.77□□□□□ -0.84
CLNS1AP1-201ENST00000435954 ATP9BO43861 1147 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 FSHRP23945 695 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 RAB15P59190 212 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 RNF20Q5VTR2 975 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 CYP4X1Q8N118 509 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 NFATC2IPQ8NCF5 419 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 FLAD1Q8NFF5 587 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 CCDC85AQ96PX6 553 aaPredicted RBP9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 TOR4AQ9NXH8 423 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 IGSF1Q8N6C5 1336 aa9.77□□□□□ -0.85
CLNS1AP1-201ENST00000435954 LOC105371045A0A1W2PR82 267 aa9.76□□□□□ -0.85
CLNS1AP1-201ENST00000435954 NR5A1Q13285 461 aa9.76□□□□□ -0.85
CLNS1AP1-201ENST00000435954 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
CLNS1AP1-201ENST00000435954 PLPP7Q8NBV4 271 aa9.76□□□□□ -0.85
CLNS1AP1-201ENST00000435954 KCNH5Q8NCM2 988 aa9.76□□□□□ -0.85
CLNS1AP1-201ENST00000435954 TTC24A2A3L6 582 aaPredicted RBP9.75□□□□□ -0.85
CLNS1AP1-201ENST00000435954 J3QL48 77 aa9.75□□□□□ -0.85
CLNS1AP1-201ENST00000435954 MAFBQ9Y5Q3 323 aaPredicted RBP9.75□□□□□ -0.85
CLNS1AP1-201ENST00000435954 COL18A1P39060 1754 aa9.75□□□□□ -0.85
CLNS1AP1-201ENST00000435954 C10orf71Q711Q0 1435 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 ERVH48-1M5A8F1 160 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 NR3C2P08235 984 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 LMOD1P29536 600 aaPredicted RBP9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 HTRA3P83110 453 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 SMC1BQ8NDV3 1235 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 CDK19Q9BWU1 502 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 NMRK2Q9NPI5 230 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 WASF2Q9Y6W5 498 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 PCNTO95613 3336 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 KDM2BQ8NHM5 1336 aa9.74□□□□□ -0.85
CLNS1AP1-201ENST00000435954 USP17L5A8MUK1 530 aa9.73□□□□□ -0.85
CLNS1AP1-201ENST00000435954 IL2RBP14784 551 aa9.73□□□□□ -0.85
CLNS1AP1-201ENST00000435954 RFX1P22670 979 aa9.73□□□□□ -0.85
CLNS1AP1-201ENST00000435954 MAP7D1Q3KQU3 841 aa9.73□□□□□ -0.85
CLNS1AP1-201ENST00000435954 DOLKQ9UPQ8 538 aa9.73□□□□□ -0.85
CLNS1AP1-201ENST00000435954 PCDHB11Q9Y5F2 797 aa9.73□□□□□ -0.85
CLNS1AP1-201ENST00000435954 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
CLNS1AP1-201ENST00000435954 SMPD1P17405 629 aa9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 NNTQ13423 1086 aa9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 ARHGEF25Q86VW2 580 aa9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 COL23A1Q86Y22 540 aaPredicted RBP9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 PLEKHM2Q8IWE5 1019 aa9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 CCDC116Q8IYX3 515 aa9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 DEPDC4Q8N2C3 294 aa9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 TMPRSS4Q9NRS4 437 aa9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 CCNL1Q9UK58 526 aaPredicted RBP9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 PDZRN3Q9UPQ7 1066 aa9.72□□□□□ -0.85
CLNS1AP1-201ENST00000435954 LY75O60449 1722 aa9.71□□□□□ -0.85
CLNS1AP1-201ENST00000435954 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
CLNS1AP1-201ENST00000435954 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
CLNS1AP1-201ENST00000435954 DHX9Q08211 1270 aaKnown RBP9.71□□□□□ -0.86
CLNS1AP1-201ENST00000435954 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
CLNS1AP1-201ENST00000435954 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
CLNS1AP1-201ENST00000435954 LZTS3O60299 673 aaPredicted RBP9.7□□□□□ -0.86
CLNS1AP1-201ENST00000435954 NCOA4Q13772 614 aa9.7□□□□□ -0.86
CLNS1AP1-201ENST00000435954 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
CLNS1AP1-201ENST00000435954 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
CLNS1AP1-201ENST00000435954 SYTL4Q96C24 671 aaPredicted RBP9.7□□□□□ -0.86
CLNS1AP1-201ENST00000435954 PRDM10Q9NQV6 1147 aa9.7□□□□□ -0.86
CLNS1AP1-201ENST00000435954 QRICH2Q9H0J4 1663 aa9.7□□□□□ -0.86
CLNS1AP1-201ENST00000435954 SRPK2P78362 688 aaKnown RBP9.69□□□□□ -0.86
CLNS1AP1-201ENST00000435954 ANKRD36BQ8N2N9 1353 aa9.69□□□□□ -0.86
CLNS1AP1-201ENST00000435954 USP47Q96K76 1375 aa9.69□□□□□ -0.86
CLNS1AP1-201ENST00000435954 TNRC6CQ9HCJ0 1690 aaKnown RBP9.69□□□□□ -0.86
CLNS1AP1-201ENST00000435954 NLRP2Q9NX02 1062 aa9.69□□□□□ -0.86
CLNS1AP1-201ENST00000435954 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
CLNS1AP1-201ENST00000435954 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.68□□□□□ -0.86
CLNS1AP1-201ENST00000435954 MLLT1Q03111 559 aaPredicted RBP9.68□□□□□ -0.86
CLNS1AP1-201ENST00000435954 EML3Q32P44 896 aa9.68□□□□□ -0.86
CLNS1AP1-201ENST00000435954 PXDNLA1KZ92 1463 aa9.67□□□□□ -0.86
CLNS1AP1-201ENST00000435954 SCTRP47872 440 aa9.67□□□□□ -0.86
CLNS1AP1-201ENST00000435954 HPS1Q92902 700 aa9.67□□□□□ -0.86
CLNS1AP1-201ENST00000435954 AIDAQ96BJ3 306 aa9.67□□□□□ -0.86
CLNS1AP1-201ENST00000435954 MPHOSPH9Q99550 1183 aa9.67□□□□□ -0.86
CLNS1AP1-201ENST00000435954 KLF16Q9BXK1 252 aaPredicted RBP9.67□□□□□ -0.86
CLNS1AP1-201ENST00000435954 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
CLNS1AP1-201ENST00000435954 KCNQ4P56696 695 aa9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 ERVK-9P63128 1117 aa9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 USP4Q13107 963 aa9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 CDCA8Q53HL2 280 aa9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 ARHGAP27Q6ZUM4 889 aa9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 VRTNQ9H8Y1 702 aa9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 PGPEP1Q9NXJ5 209 aa9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 MKRN1Q9UHC7 482 aaKnown RBP9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 BCS1LQ9Y276 419 aa9.66□□□□□ -0.86
CLNS1AP1-201ENST00000435954 C5P01031 1676 aa9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 TTC21AQ8NDW8 1320 aa9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 LILRA1O75019 489 aa9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 CTCFP49711 727 aaPredicted RBP9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 TGFB2P61812 414 aa9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 CC2D2BQ6DHV5 1058 aa9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 DDX54Q8TDD1 881 aaKnown RBP9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
CLNS1AP1-201ENST00000435954 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms