RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 GPSM2P81274 684 aa23.58■■□□□ 1.37
SMG1P3-201ENST00000435197 MIER1Q8N108 512 aa23.58■■□□□ 1.37
SMG1P3-201ENST00000435197 KCNQ5Q9NR82 932 aa23.58■■□□□ 1.37
SMG1P3-201ENST00000435197 PSME4Q14997 1843 aa23.58■■□□□ 1.37
SMG1P3-201ENST00000435197 SF3B3Q15393 1217 aaKnown RBP23.57■■□□□ 1.36
SMG1P3-201ENST00000435197 KIF4BQ2VIQ3 1234 aa23.57■■□□□ 1.36
SMG1P3-201ENST00000435197 CCER2I3L3R5 266 aa23.56■■□□□ 1.36
SMG1P3-201ENST00000435197 DOK7Q18PE1 504 aa23.56■■□□□ 1.36
SMG1P3-201ENST00000435197 EYA3Q99504 573 aa23.56■■□□□ 1.36
SMG1P3-201ENST00000435197 GGA3Q9NZ52 723 aa23.56■■□□□ 1.36
SMG1P3-201ENST00000435197 SULF1Q8IWU6 871 aa23.55■■□□□ 1.36
SMG1P3-201ENST00000435197 FAM89AQ96GI7 184 aa23.55■■□□□ 1.36
SMG1P3-201ENST00000435197 CHPF2Q9P2E5 772 aa23.55■■□□□ 1.36
SMG1P3-201ENST00000435197 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
SMG1P3-201ENST00000435197 KRT24Q2M2I5 525 aa23.54■■□□□ 1.36
SMG1P3-201ENST00000435197 PLBD2Q8NHP8 589 aa23.54■■□□□ 1.36
SMG1P3-201ENST00000435197 CDCA5Q96FF9 252 aa23.54■■□□□ 1.36
SMG1P3-201ENST00000435197 CSRNP1Q96S65 589 aa23.54■■□□□ 1.36
SMG1P3-201ENST00000435197 ISCA1Q9BUE6 129 aa23.54■■□□□ 1.36
SMG1P3-201ENST00000435197 PAPPA2Q9BXP8 1791 aa23.54■■□□□ 1.36
SMG1P3-201ENST00000435197 ASTN2O75129 1339 aaPredicted RBP23.54■■□□□ 1.36
SMG1P3-201ENST00000435197 TBC1D16Q8TBP0 767 aa23.53■■□□□ 1.36
SMG1P3-201ENST00000435197 ZNF609O15014 1411 aa23.52■■□□□ 1.36
SMG1P3-201ENST00000435197 VIL1P09327 827 aaKnown RBP23.52■■□□□ 1.36
SMG1P3-201ENST00000435197 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
SMG1P3-201ENST00000435197 CTU1Q7Z7A3 348 aaKnown RBP23.52■■□□□ 1.36
SMG1P3-201ENST00000435197 MRS2Q9HD23 443 aa23.52■■□□□ 1.36
SMG1P3-201ENST00000435197 ATP5J2-PTCD1G3V325 749 aa23.51■■□□□ 1.35
SMG1P3-201ENST00000435197 ANKRD13DQ6ZTN6 518 aa23.5■■□□□ 1.35
SMG1P3-201ENST00000435197 RASAL3Q86YV0 1011 aa23.5■■□□□ 1.35
SMG1P3-201ENST00000435197 REM2Q8IYK8 340 aaPredicted RBP23.5■■□□□ 1.35
SMG1P3-201ENST00000435197 ZC3H12CQ9C0D7 883 aaKnown RBP23.5■■□□□ 1.35
SMG1P3-201ENST00000435197 RPS8P62241 208 aaKnown RBP23.49■■□□□ 1.35
SMG1P3-201ENST00000435197 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
SMG1P3-201ENST00000435197 HDGFL1Q5TGJ6 251 aa23.49■■□□□ 1.35
SMG1P3-201ENST00000435197 PODXL2Q9NZ53 605 aa23.49■■□□□ 1.35
SMG1P3-201ENST00000435197 CHL1O00533 1208 aa23.48■■□□□ 1.35
SMG1P3-201ENST00000435197 IRS4O14654 1257 aaPredicted RBP23.48■■□□□ 1.35
SMG1P3-201ENST00000435197 ZNF280AP59817 542 aaPredicted RBP23.48■■□□□ 1.35
SMG1P3-201ENST00000435197 ANGEL2Q5VTE6 544 aaKnown RBP23.48■■□□□ 1.35
SMG1P3-201ENST00000435197 UFL1O94874 794 aa23.47■■□□□ 1.35
SMG1P3-201ENST00000435197 CCDC184Q52MB2 194 aa23.47■■□□□ 1.35
SMG1P3-201ENST00000435197 PRPF38BQ5VTL8 546 aaKnown RBP23.47■■□□□ 1.35
SMG1P3-201ENST00000435197 G3V3G9 751 aa23.46■■□□□ 1.35
SMG1P3-201ENST00000435197 FKBP1BP68106 108 aa23.46■■□□□ 1.35
SMG1P3-201ENST00000435197 SCARF1Q14162 830 aa23.46■■□□□ 1.35
SMG1P3-201ENST00000435197 DCAF8Q5TAQ9 597 aa23.46■■□□□ 1.35
SMG1P3-201ENST00000435197 AGBL3Q8NEM8 1001 aa23.46■■□□□ 1.35
SMG1P3-201ENST00000435197 DBF4Q9UBU7 674 aaPredicted RBP23.46■■□□□ 1.35
SMG1P3-201ENST00000435197 HPS5Q9UPZ3 1129 aa23.46■■□□□ 1.35
SMG1P3-201ENST00000435197 HOXB7P09629 217 aa23.45■■□□□ 1.34
SMG1P3-201ENST00000435197 TRIM28Q13263 835 aaKnown RBP23.45■■□□□ 1.34
SMG1P3-201ENST00000435197 WDR43Q15061 677 aaKnown RBP eCLIP23.45■■□□□ 1.34
SMG1P3-201ENST00000435197 RSBN1LQ6PCB5 846 aaPredicted RBP23.45■■□□□ 1.34
SMG1P3-201ENST00000435197 SEC31BQ9NQW1 1179 aa23.44■■□□□ 1.34
SMG1P3-201ENST00000435197 ANKIB1Q9P2G1 1089 aa23.44■■□□□ 1.34
SMG1P3-201ENST00000435197 GGA1Q9UJY5 639 aa23.44■■□□□ 1.34
SMG1P3-201ENST00000435197 LAS1LQ9Y4W2 734 aaKnown RBP23.44■■□□□ 1.34
SMG1P3-201ENST00000435197 ZNF646O15015 1829 aaPredicted RBP23.43■■□□□ 1.34
SMG1P3-201ENST00000435197 PITPNM2Q9BZ72 1349 aa23.43■■□□□ 1.34
SMG1P3-201ENST00000435197 NEUROD2Q15784 382 aa23.43■■□□□ 1.34
SMG1P3-201ENST00000435197 HYPKQ9NX55 129 aa23.43■■□□□ 1.34
SMG1P3-201ENST00000435197 GMLQ99445 158 aa23.42■■□□□ 1.34
SMG1P3-201ENST00000435197 PKN2Q16513 984 aaKnown RBP23.41■■□□□ 1.34
SMG1P3-201ENST00000435197 MOB2Q70IA6 237 aa23.41■■□□□ 1.34
SMG1P3-201ENST00000435197 ZBTB38Q8NAP3 1195 aaPredicted RBP23.41■■□□□ 1.34
SMG1P3-201ENST00000435197 MYOZ2Q9NPC6 264 aa23.41■■□□□ 1.34
SMG1P3-201ENST00000435197 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
SMG1P3-201ENST00000435197 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
SMG1P3-201ENST00000435197 ZNF296Q8WUU4 475 aaPredicted RBP23.4■■□□□ 1.34
SMG1P3-201ENST00000435197 HDAC9Q9UKV0 1011 aa23.4■■□□□ 1.34
SMG1P3-201ENST00000435197 TRIM35Q9UPQ4 493 aa23.4■■□□□ 1.34
SMG1P3-201ENST00000435197 SPEF2Q9C093 1822 aa23.4■■□□□ 1.34
SMG1P3-201ENST00000435197 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.33
SMG1P3-201ENST00000435197 TBC1D8O95759 1140 aa23.38■■□□□ 1.33
SMG1P3-201ENST00000435197 SCAF8Q9UPN6 1271 aaKnown RBP23.38■■□□□ 1.33
SMG1P3-201ENST00000435197 XDHP47989 1333 aa23.37■■□□□ 1.33
SMG1P3-201ENST00000435197 UBE2Q2LH0YL09 131 aa23.37■■□□□ 1.33
SMG1P3-201ENST00000435197 CCDC152Q4G0S7 254 aa23.37■■□□□ 1.33
SMG1P3-201ENST00000435197 DUSP27Q5VZP5 1158 aa23.37■■□□□ 1.33
SMG1P3-201ENST00000435197 RIC3Q7Z5B4 369 aa23.37■■□□□ 1.33
SMG1P3-201ENST00000435197 USP17L3A6NCW0 530 aa23.36■■□□□ 1.33
SMG1P3-201ENST00000435197 USP17L4A6NCW7 530 aa23.36■■□□□ 1.33
SMG1P3-201ENST00000435197 GOLGA2Q08379 1002 aa23.36■■□□□ 1.33
SMG1P3-201ENST00000435197 USP17L1Q7RTZ2 530 aa23.36■■□□□ 1.33
SMG1P3-201ENST00000435197 ADAMTS8Q9UP79 889 aa23.36■■□□□ 1.33
SMG1P3-201ENST00000435197 MYH3P11055 1940 aa23.35■■□□□ 1.33
SMG1P3-201ENST00000435197 NOM1Q5C9Z4 860 aaKnown RBP23.35■■□□□ 1.33
SMG1P3-201ENST00000435197 PRAMEF18Q5VWM3 479 aa23.35■■□□□ 1.33
SMG1P3-201ENST00000435197 PODNQ7Z5L7 613 aa23.35■■□□□ 1.33
SMG1P3-201ENST00000435197 CCDC85AQ96PX6 553 aaPredicted RBP23.35■■□□□ 1.33
SMG1P3-201ENST00000435197 PDE8AO60658 829 aa23.34■■□□□ 1.33
SMG1P3-201ENST00000435197 PCCAP05165 728 aaPredicted RBP23.34■■□□□ 1.33
SMG1P3-201ENST00000435197 ATP2B4P23634 1241 aa23.34■■□□□ 1.33
SMG1P3-201ENST00000435197 TM4SF4P48230 202 aa23.34■■□□□ 1.33
SMG1P3-201ENST00000435197 NBPF9Q3BBW0 867 aa23.34■■□□□ 1.33
SMG1P3-201ENST00000435197 ANKRD18AQ8IVF6 992 aa23.34■■□□□ 1.33
SMG1P3-201ENST00000435197 MYD88Q99836 296 aa23.34■■□□□ 1.33
SMG1P3-201ENST00000435197 GPR25O00155 361 aa23.33■■□□□ 1.33
SMG1P3-201ENST00000435197 TTLL12Q14166 644 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms