RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 RPS8P62241 208 aaKnown RBP15.1■□□□□ 0.01
CHRNA1-207ENST00000435083 KIF23Q02241 960 aaPredicted RBP15.1■□□□□ 0.01
CHRNA1-207ENST00000435083 DCAF8Q5TAQ9 597 aa15.1■□□□□ 0.01
CHRNA1-207ENST00000435083 TBC1D16Q8TBP0 767 aa15.1■□□□□ 0.01
CHRNA1-207ENST00000435083 ZC3H12CQ9C0D7 883 aaKnown RBP15.1■□□□□ 0.01
CHRNA1-207ENST00000435083 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
CHRNA1-207ENST00000435083 COL4A1P02462 1669 aa15.09■□□□□ 0.01
CHRNA1-207ENST00000435083 FAM155AB1AL88 458 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-207ENST00000435083 ZNF157P51786 506 aaPredicted RBP15.09■□□□□ 0.01
CHRNA1-207ENST00000435083 KIF4BQ2VIQ3 1234 aa15.09■□□□□ 0.01
CHRNA1-207ENST00000435083 CCDC102AQ96A19 550 aa15.09■□□□□ 0.01
CHRNA1-207ENST00000435083 HYPKQ9NX55 129 aa15.09■□□□□ 0.01
CHRNA1-207ENST00000435083 RTL9Q8NET4 1388 aa15.09■□□□□ 0.01
CHRNA1-207ENST00000435083 HOXB7P09629 217 aa15.08■□□□□ 0
CHRNA1-207ENST00000435083 SULF1Q8IWU6 871 aa15.08■□□□□ 0
CHRNA1-207ENST00000435083 RUNDC1Q96C34 613 aa15.08■□□□□ 0
CHRNA1-207ENST00000435083 DUSP27Q5VZP5 1158 aa15.07■□□□□ 0
CHRNA1-207ENST00000435083 RIC3Q7Z5B4 369 aa15.07■□□□□ 0
CHRNA1-207ENST00000435083 GGA3Q9NZ52 723 aa15.07■□□□□ 0
CHRNA1-207ENST00000435083 ASTN2O75129 1339 aaPredicted RBP15.07■□□□□ 0
CHRNA1-207ENST00000435083 TRPA1O75762 1119 aa15.07■□□□□ 0
CHRNA1-207ENST00000435083 UFL1O94874 794 aa15.07■□□□□ 0
CHRNA1-207ENST00000435083 VIL1P09327 827 aaKnown RBP15.07■□□□□ 0
CHRNA1-207ENST00000435083 TRIM28Q13263 835 aaKnown RBP15.07■□□□□ 0
CHRNA1-207ENST00000435083 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
CHRNA1-207ENST00000435083 SEC31BQ9NQW1 1179 aa15.07■□□□□ 0
CHRNA1-207ENST00000435083 ANKIB1Q9P2G1 1089 aa15.07■□□□□ 0
CHRNA1-207ENST00000435083 RNF186Q9NXI6 227 aa15.06■□□□□ 0
CHRNA1-207ENST00000435083 SAGE1Q9NXZ1 904 aa15.06■□□□□ 0
CHRNA1-207ENST00000435083 SCN9AQ15858 1988 aa15.05■□□□□ -0
CHRNA1-207ENST00000435083 MYBBP1AQ9BQG0 1328 aaKnown RBP15.05■□□□□ -0
CHRNA1-207ENST00000435083 GOLGA2Q08379 1002 aa15.05■□□□□ -0
CHRNA1-207ENST00000435083 ZBTB38Q8NAP3 1195 aaPredicted RBP15.05■□□□□ -0
CHRNA1-207ENST00000435083 CDCA5Q96FF9 252 aa15.05■□□□□ -0
CHRNA1-207ENST00000435083 PODXL2Q9NZ53 605 aa15.05■□□□□ -0
CHRNA1-207ENST00000435083 GGA1Q9UJY5 639 aa15.05■□□□□ -0
CHRNA1-207ENST00000435083 SLC10A3P09131 477 aa15.04■□□□□ -0
CHRNA1-207ENST00000435083 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
CHRNA1-207ENST00000435083 CSRNP1Q96S65 589 aa15.04■□□□□ -0
CHRNA1-207ENST00000435083 MYD88Q99836 296 aa15.04■□□□□ -0
CHRNA1-207ENST00000435083 PHAXQ9H814 394 aaKnown RBP15.04■□□□□ -0
CHRNA1-207ENST00000435083 AKAP11Q9UKA4 1901 aa15.04■□□□□ -0
CHRNA1-207ENST00000435083 SCARF1Q14162 830 aa15.03■□□□□ -0
CHRNA1-207ENST00000435083 ANGEL2Q5VTE6 544 aaKnown RBP15.03■□□□□ -0
CHRNA1-207ENST00000435083 RSBN1LQ6PCB5 846 aaPredicted RBP15.03■□□□□ -0
CHRNA1-207ENST00000435083 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
CHRNA1-207ENST00000435083 CCDC85AQ96PX6 553 aaPredicted RBP15.03■□□□□ -0
CHRNA1-207ENST00000435083 MBIPQ9NS73 344 aa15.03■□□□□ -0
CHRNA1-207ENST00000435083 ADAMTS8Q9UP79 889 aa15.03■□□□□ -0
CHRNA1-207ENST00000435083 ELL2O00472 640 aaPredicted RBP15.02■□□□□ -0
CHRNA1-207ENST00000435083 CCDC152Q4G0S7 254 aa15.02■□□□□ -0
CHRNA1-207ENST00000435083 AGBL3Q8NEM8 1001 aa15.02■□□□□ -0
CHRNA1-207ENST00000435083 PDE8AO60658 829 aa15.02□□□□□ -0.01
CHRNA1-207ENST00000435083 PCCAP05165 728 aaPredicted RBP15.02□□□□□ -0.01
CHRNA1-207ENST00000435083 SOX10P56693 466 aa15.02□□□□□ -0.01
CHRNA1-207ENST00000435083 ZNF280AP59817 542 aaPredicted RBP15.02□□□□□ -0.01
CHRNA1-207ENST00000435083 DDX10Q13206 875 aaKnown RBP15.02□□□□□ -0.01
CHRNA1-207ENST00000435083 ANKRD18AQ8IVF6 992 aa15.01□□□□□ -0.01
CHRNA1-207ENST00000435083 CCDC191Q8NCU4 936 aa15.01□□□□□ -0.01
CHRNA1-207ENST00000435083 XDHP47989 1333 aa15□□□□□ -0.01
CHRNA1-207ENST00000435083 USP17L8P0C7I0 530 aa15□□□□□ -0.01
CHRNA1-207ENST00000435083 RASAL3Q86YV0 1011 aa15□□□□□ -0.01
CHRNA1-207ENST00000435083 MYOZ2Q9NPC6 264 aa15□□□□□ -0.01
CHRNA1-207ENST00000435083 CWC25Q9NXE8 425 aaPredicted RBP15□□□□□ -0.01
CHRNA1-207ENST00000435083 ATP2B4P23634 1241 aa14.99□□□□□ -0.01
CHRNA1-207ENST00000435083 CTU1Q7Z7A3 348 aaKnown RBP14.99□□□□□ -0.01
CHRNA1-207ENST00000435083 REM2Q8IYK8 340 aaPredicted RBP14.99□□□□□ -0.01
CHRNA1-207ENST00000435083 GMLQ99445 158 aa14.99□□□□□ -0.01
CHRNA1-207ENST00000435083 SCAF8Q9UPN6 1271 aaKnown RBP14.99□□□□□ -0.01
CHRNA1-207ENST00000435083 USP17L3A6NCW0 530 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 USP17L4A6NCW7 530 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 ZNF853P0CG23 659 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 FKBP1BP68106 108 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 MOB2Q70IA6 237 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 USP17L1Q7RTZ2 530 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 PSME4Q14997 1843 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 ZNF609O15014 1411 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 UBE2Q2LH0YL09 131 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 GNAI1P63096 354 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 PODNQ7Z5L7 613 aa14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 METTL22Q9BUU2 404 aaPredicted RBP14.98□□□□□ -0.01
CHRNA1-207ENST00000435083 PAPPA2Q9BXP8 1791 aa14.97□□□□□ -0.01
CHRNA1-207ENST00000435083 PITPNM2Q9BZ72 1349 aa14.97□□□□□ -0.01
CHRNA1-207ENST00000435083 DDX58O95786 925 aaKnown RBP14.97□□□□□ -0.01
CHRNA1-207ENST00000435083 TTLL12Q14166 644 aaPredicted RBP14.97□□□□□ -0.01
CHRNA1-207ENST00000435083 PRAMEF18Q5VWM3 479 aa14.97□□□□□ -0.01
CHRNA1-207ENST00000435083 IFT57Q9NWB7 429 aa14.97□□□□□ -0.01
CHRNA1-207ENST00000435083 WTIPA6NIX2 430 aaPredicted RBP14.96□□□□□ -0.01
CHRNA1-207ENST00000435083 APAF1O14727 1248 aa14.96□□□□□ -0.01
CHRNA1-207ENST00000435083 CALD1Q05682 793 aaKnown RBP14.96□□□□□ -0.01
CHRNA1-207ENST00000435083 NBPF9Q3BBW0 867 aa14.96□□□□□ -0.01
CHRNA1-207ENST00000435083 C8orf58Q8NAV2 365 aa14.96□□□□□ -0.01
CHRNA1-207ENST00000435083 FBXW7Q969H0 707 aa14.96□□□□□ -0.01
CHRNA1-207ENST00000435083 CDC5LQ99459 802 aaKnown RBP14.96□□□□□ -0.01
CHRNA1-207ENST00000435083 HDAC9Q9UKV0 1011 aa14.96□□□□□ -0.01
CHRNA1-207ENST00000435083 TBC1D8O95759 1140 aa14.95□□□□□ -0.02
CHRNA1-207ENST00000435083 CTSWP56202 376 aa14.95□□□□□ -0.02
CHRNA1-207ENST00000435083 CCDC30Q5VVM6 783 aa14.95□□□□□ -0.02
CHRNA1-207ENST00000435083 MXD3Q9BW11 206 aa14.95□□□□□ -0.02
CHRNA1-207ENST00000435083 MAP3K2Q9Y2U5 619 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms